| Literature DB >> 21583182 |
Yumin Huang, Siping Wei, Zhen Wang, Zhihua Mao, Xiaoyu Su.
Abstract
The title compound, C(18)H(18)N(3)O(+)·PF(6) (-), is a chiral bicyclic 1,2,4-triazolium salt which contains four rings, viz. a triazolium, a morpholine and two phenyl rings. Analysis of bond lengths shows that the N-CH-N group in the triazolium ring conforms to a typical three-center/four-electron bond (also known as the Pimentel-Rundle three-center model). The structure is completed by a disordered PF(6) (-) counter-ion [occupancies of F atoms 0.678 (8):0.322 (8)], which inter-acts with the main mol-ecule through weak inter-molecular P-F⋯π inter-actions.Entities:
Year: 2009 PMID: 21583182 PMCID: PMC2969544 DOI: 10.1107/S1600536809018005
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H18N3O+·F6P− | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 3172 reflections |
| θ = 3.1–26.0° | |
| µ = 0.21 mm−1 | |
| β = 118.678 (2)° | Parallelepiped, colourless |
| 0.53 × 0.42 × 0.32 mm | |
| Bruker SMART CCD area-detector diffractometer | 3406 independent reflections |
| Radiation source: fine-focus sealed tube | 2984 reflections with |
| graphite | |
| φ and ω scans | θmax = 26.0°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 5505 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max = 0.009 | |
| Δρmax = 0.20 e Å−3 | |
| 3406 reflections | Δρmin = −0.20 e Å−3 |
| 318 parameters | Extinction correction: |
| 31 restraints | Extinction coefficient: 0.019 (3) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 1368 Friedel pairs |
| Secondary atom site location: difference Fourier map | Flack parameter: 0.01 (10) |
| Experimental. Even if the Flack parameter coming out of refinement appears quite trustable,
the fact that the heaviest atomic species in the structure is P could suggest
that the absolute structure determination could be thought as dubious.
However, because the stereogenic carbon does not directly participate in the
cyclocondensation, there is little risk
for the racemization of the stereogenic carbon in this reaction. (Knight,
|
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| P1 | 0.79225 (6) | 0.03833 (8) | 0.45453 (6) | 0.0488 (2) | |
| O1 | 0.67186 (18) | 0.5581 (3) | 0.70365 (16) | 0.0669 (5) | |
| N1 | 0.69585 (16) | 0.5547 (3) | 0.34299 (15) | 0.0428 (4) | |
| N2 | 0.59091 (18) | 0.5715 (3) | 0.36766 (18) | 0.0514 (5) | |
| N3 | 0.77918 (16) | 0.5257 (3) | 0.54549 (15) | 0.0422 (4) | |
| C1 | 0.5666 (3) | 0.6481 (4) | 0.1230 (3) | 0.0637 (7) | |
| H1A | 0.5131 | 0.7093 | 0.1469 | 0.076* | |
| C2 | 0.5404 (3) | 0.6440 (5) | −0.0031 (3) | 0.0788 (9) | |
| H2B | 0.4675 | 0.7013 | −0.0654 | 0.095* | |
| C3 | 0.6212 (3) | 0.5557 (5) | −0.0376 (3) | 0.0707 (8) | |
| H3A | 0.6023 | 0.5529 | −0.1231 | 0.085* | |
| C4 | 0.7283 (3) | 0.4729 (5) | 0.0528 (3) | 0.0734 (9) | |
| H4A | 0.7841 | 0.4162 | 0.0293 | 0.088* | |
| C5 | 0.7556 (3) | 0.4719 (4) | 0.1800 (3) | 0.0636 (7) | |
| H5A | 0.8279 | 0.4132 | 0.2418 | 0.076* | |
| C6 | 0.6733 (2) | 0.5598 (3) | 0.2126 (2) | 0.0464 (5) | |
| C7 | 0.8076 (2) | 0.5279 (4) | 0.44951 (19) | 0.0435 (5) | |
| H7A | 0.8917 | 0.5132 | 0.4564 | 0.052* | |
| C8 | 0.6451 (2) | 0.5535 (4) | 0.4908 (2) | 0.0486 (5) | |
| C9 | 0.5763 (3) | 0.5573 (6) | 0.5721 (2) | 0.0713 (9) | |
| H9A | 0.5209 | 0.6550 | 0.5519 | 0.086* | |
| H9B | 0.5190 | 0.4616 | 0.5533 | 0.086* | |
| C10 | 0.7696 (3) | 0.4335 (4) | 0.7317 (2) | 0.0579 (7) | |
| H10A | 0.7261 | 0.3313 | 0.6908 | 0.069* | |
| H10B | 0.8187 | 0.4152 | 0.8237 | 0.069* | |
| C11 | 0.8654 (2) | 0.4849 (3) | 0.6834 (2) | 0.0447 (5) | |
| H11A | 0.9229 | 0.3914 | 0.6904 | 0.054* | |
| C12 | 0.9534 (3) | 0.6333 (3) | 0.7548 (2) | 0.0531 (6) | |
| H12A | 1.0050 | 0.6667 | 0.7133 | 0.064* | |
| H12B | 0.8971 | 0.7250 | 0.7510 | 0.064* | |
| C13 | 1.0474 (2) | 0.5901 (3) | 0.8942 (2) | 0.0514 (6) | |
| C14 | 1.1674 (3) | 0.5140 (4) | 0.9300 (3) | 0.0677 (8) | |
| H14A | 1.1937 | 0.4904 | 0.8686 | 0.081* | |
| C15 | 1.2500 (3) | 0.4720 (5) | 1.0580 (4) | 0.0796 (9) | |
| H15A | 1.3321 | 0.4225 | 1.0819 | 0.095* | |
| C16 | 1.2119 (3) | 0.5024 (4) | 1.1490 (3) | 0.0794 (10) | |
| H16A | 1.2674 | 0.4726 | 1.2341 | 0.095* | |
| C17 | 1.0925 (3) | 0.5766 (4) | 1.1146 (3) | 0.0710 (8) | |
| H17A | 1.0662 | 0.5973 | 1.1764 | 0.085* | |
| C18 | 1.0103 (3) | 0.6211 (4) | 0.9885 (3) | 0.0590 (7) | |
| H18A | 0.9292 | 0.6726 | 0.9660 | 0.071* | |
| F1 | 0.7113 (5) | 0.1769 (5) | 0.4784 (7) | 0.105 (2) | 0.678 (8) |
| F2 | 0.7470 (6) | −0.0824 (7) | 0.5298 (6) | 0.115 (2) | 0.678 (8) |
| F3 | 0.8763 (5) | −0.0945 (6) | 0.4304 (8) | 0.118 (3) | 0.678 (8) |
| F4 | 0.8458 (8) | 0.1611 (7) | 0.3921 (7) | 0.126 (3) | 0.678 (8) |
| F5 | 0.9187 (4) | 0.0816 (12) | 0.5876 (4) | 0.132 (3) | 0.678 (8) |
| F6 | 0.6692 (5) | −0.0133 (10) | 0.3319 (4) | 0.128 (2) | 0.678 (8) |
| F1' | 0.767 (2) | 0.125 (3) | 0.5475 (17) | 0.214 (11) | 0.322 (8) |
| F2' | 0.6898 (13) | −0.0908 (11) | 0.433 (2) | 0.142 (7) | 0.322 (8) |
| F3' | 0.811 (3) | −0.036 (4) | 0.350 (2) | 0.280 (14) | 0.322 (8) |
| F4' | 0.8949 (12) | 0.1741 (13) | 0.476 (2) | 0.154 (9) | 0.322 (8) |
| F5' | 0.9061 (10) | −0.069 (2) | 0.542 (2) | 0.174 (9) | 0.322 (8) |
| F6' | 0.6823 (13) | 0.138 (2) | 0.3481 (18) | 0.192 (8) | 0.322 (8) |
| P1 | 0.0462 (3) | 0.0449 (3) | 0.0583 (4) | −0.0032 (3) | 0.0276 (3) | −0.0032 (3) |
| O1 | 0.0668 (10) | 0.0884 (15) | 0.0578 (10) | 0.0000 (12) | 0.0398 (9) | −0.0050 (11) |
| N1 | 0.0398 (8) | 0.0493 (11) | 0.0410 (9) | −0.0007 (10) | 0.0207 (7) | 0.0010 (9) |
| N2 | 0.0407 (9) | 0.0657 (16) | 0.0500 (11) | 0.0068 (10) | 0.0234 (8) | 0.0035 (10) |
| N3 | 0.0418 (8) | 0.0444 (11) | 0.0410 (9) | 0.0000 (10) | 0.0203 (7) | 0.0004 (9) |
| C1 | 0.0640 (16) | 0.0757 (19) | 0.0531 (15) | 0.0131 (15) | 0.0296 (14) | 0.0078 (13) |
| C2 | 0.0738 (19) | 0.104 (3) | 0.0513 (16) | 0.015 (2) | 0.0243 (15) | 0.0201 (17) |
| C3 | 0.0831 (18) | 0.085 (2) | 0.0498 (14) | −0.002 (2) | 0.0368 (14) | 0.0091 (16) |
| C4 | 0.092 (2) | 0.083 (2) | 0.0690 (18) | 0.0091 (18) | 0.0574 (18) | 0.0011 (16) |
| C5 | 0.0673 (16) | 0.0746 (18) | 0.0560 (15) | 0.0157 (15) | 0.0353 (13) | 0.0103 (13) |
| C6 | 0.0459 (10) | 0.0514 (15) | 0.0429 (11) | −0.0081 (12) | 0.0220 (9) | 0.0001 (11) |
| C7 | 0.0395 (10) | 0.0474 (13) | 0.0451 (11) | −0.0023 (11) | 0.0216 (9) | −0.0006 (10) |
| C8 | 0.0448 (11) | 0.0535 (14) | 0.0520 (12) | 0.0022 (12) | 0.0269 (10) | −0.0003 (12) |
| C9 | 0.0583 (13) | 0.110 (3) | 0.0584 (15) | 0.012 (2) | 0.0380 (13) | 0.0084 (19) |
| C10 | 0.0607 (15) | 0.0610 (17) | 0.0487 (14) | −0.0096 (13) | 0.0237 (12) | 0.0041 (12) |
| C11 | 0.0463 (12) | 0.0444 (13) | 0.0402 (11) | 0.0020 (9) | 0.0182 (10) | 0.0008 (9) |
| C12 | 0.0546 (14) | 0.0538 (15) | 0.0494 (13) | −0.0061 (12) | 0.0237 (12) | 0.0018 (11) |
| C13 | 0.0511 (13) | 0.0465 (14) | 0.0512 (13) | −0.0076 (10) | 0.0201 (11) | −0.0039 (10) |
| C14 | 0.0515 (13) | 0.071 (2) | 0.0762 (18) | −0.0059 (14) | 0.0270 (13) | −0.0082 (15) |
| C15 | 0.0495 (15) | 0.072 (2) | 0.091 (2) | −0.0005 (15) | 0.0126 (15) | 0.0044 (17) |
| C16 | 0.079 (2) | 0.064 (2) | 0.0590 (17) | −0.0103 (16) | 0.0041 (16) | 0.0011 (14) |
| C17 | 0.092 (2) | 0.064 (2) | 0.0467 (14) | −0.0145 (16) | 0.0250 (14) | −0.0090 (13) |
| C18 | 0.0632 (15) | 0.0567 (16) | 0.0523 (14) | −0.0026 (13) | 0.0240 (13) | −0.0087 (12) |
| F1 | 0.084 (3) | 0.054 (2) | 0.219 (7) | −0.0148 (17) | 0.107 (4) | −0.037 (3) |
| F2 | 0.125 (4) | 0.104 (4) | 0.137 (4) | −0.005 (3) | 0.081 (3) | 0.047 (3) |
| F3 | 0.079 (3) | 0.072 (3) | 0.216 (7) | 0.009 (2) | 0.083 (4) | −0.037 (4) |
| F4 | 0.190 (7) | 0.091 (4) | 0.167 (5) | −0.017 (4) | 0.143 (5) | 0.023 (4) |
| F5 | 0.076 (2) | 0.214 (8) | 0.081 (2) | −0.029 (4) | 0.0164 (18) | −0.037 (3) |
| F6 | 0.098 (3) | 0.163 (6) | 0.073 (2) | −0.015 (3) | 0.002 (2) | −0.033 (3) |
| F1' | 0.30 (2) | 0.26 (2) | 0.156 (13) | −0.078 (17) | 0.172 (16) | −0.120 (13) |
| F2' | 0.100 (8) | 0.052 (5) | 0.33 (2) | −0.035 (5) | 0.145 (12) | −0.062 (10) |
| F3' | 0.34 (3) | 0.40 (4) | 0.237 (19) | −0.08 (2) | 0.24 (2) | −0.16 (2) |
| F4' | 0.072 (6) | 0.075 (6) | 0.34 (3) | −0.024 (5) | 0.120 (12) | −0.059 (12) |
| F5' | 0.085 (6) | 0.148 (13) | 0.218 (16) | 0.027 (8) | 0.015 (9) | 0.130 (13) |
| F6' | 0.119 (9) | 0.163 (14) | 0.181 (14) | 0.025 (10) | −0.017 (9) | 0.086 (12) |
| P1—F1' | 1.446 (10) | C4—C5 | 1.386 (4) |
| P1—F2' | 1.498 (7) | C4—H4A | 0.9300 |
| P1—F5' | 1.495 (7) | C5—C6 | 1.375 (4) |
| P1—F3' | 1.480 (10) | C5—H5A | 0.9300 |
| P1—F6' | 1.516 (8) | C7—H7A | 0.9300 |
| P1—F6 | 1.517 (4) | C8—C9 | 1.508 (3) |
| P1—F4 | 1.533 (4) | C9—H9A | 0.9700 |
| P1—F4' | 1.539 (9) | C9—H9B | 0.9700 |
| P1—F1 | 1.565 (3) | C10—C11 | 1.515 (3) |
| P1—F3 | 1.559 (4) | C10—H10A | 0.9700 |
| P1—F2 | 1.570 (4) | C10—H10B | 0.9700 |
| P1—F5 | 1.584 (4) | C11—C12 | 1.537 (3) |
| O1—C9 | 1.410 (3) | C11—H11A | 0.9800 |
| O1—C10 | 1.422 (4) | C12—C13 | 1.518 (3) |
| N1—C7 | 1.312 (3) | C12—H12A | 0.9700 |
| N1—N2 | 1.369 (2) | C12—H12B | 0.9700 |
| N1—C6 | 1.442 (3) | C13—C14 | 1.371 (4) |
| N2—C8 | 1.292 (3) | C13—C18 | 1.395 (4) |
| N3—C7 | 1.325 (2) | C14—C15 | 1.391 (4) |
| N3—C8 | 1.364 (3) | C14—H14A | 0.9300 |
| N3—C11 | 1.486 (3) | C15—C16 | 1.365 (5) |
| C1—C6 | 1.373 (4) | C15—H15A | 0.9300 |
| C1—C2 | 1.377 (4) | C16—C17 | 1.361 (5) |
| C1—H1A | 0.9300 | C16—H16A | 0.9300 |
| C2—C3 | 1.376 (5) | C17—C18 | 1.379 (4) |
| C2—H2B | 0.9300 | C17—H17A | 0.9300 |
| C3—C4 | 1.356 (5) | C18—H18A | 0.9300 |
| C3—H3A | 0.9300 | ||
| F1'—P1—F2' | 92.7 (10) | C4—C5—H5A | 120.8 |
| F1'—P1—F5' | 100.2 (14) | C1—C6—C5 | 121.7 (2) |
| F2'—P1—F5' | 93.2 (9) | C1—C6—N1 | 118.7 (2) |
| F1'—P1—F3' | 174.1 (17) | C5—C6—N1 | 119.5 (2) |
| F2'—P1—F3' | 89.3 (11) | N1—C7—N3 | 107.70 (17) |
| F5'—P1—F3' | 85.2 (12) | N1—C7—H7A | 126.2 |
| F1'—P1—F6' | 89.4 (11) | N3—C7—H7A | 126.2 |
| F2'—P1—F6' | 88.0 (9) | N2—C8—N3 | 112.03 (18) |
| F5'—P1—F6' | 170.3 (13) | N2—C8—C9 | 127.4 (2) |
| F3'—P1—F6' | 85.1 (15) | N3—C8—C9 | 120.6 (2) |
| F1'—P1—F4' | 86.6 (10) | O1—C9—C8 | 110.13 (19) |
| F2'—P1—F4' | 178.6 (6) | O1—C9—H9A | 109.6 |
| F5'—P1—F4' | 88.1 (7) | C8—C9—H9A | 109.6 |
| F3'—P1—F4' | 91.3 (11) | O1—C9—H9B | 109.6 |
| F6'—P1—F4' | 90.9 (9) | C8—C9—H9B | 109.6 |
| F6—P1—F1 | 91.0 (3) | H9A—C9—H9B | 108.1 |
| F4—P1—F1 | 91.5 (3) | O1—C10—C11 | 110.0 (2) |
| F6—P1—F1 | 91.0 (3) | O1—C10—H10A | 109.7 |
| F4—P1—F1 | 91.5 (3) | C11—C10—H10A | 109.7 |
| F6—P1—F3 | 90.0 (3) | O1—C10—H10B | 109.7 |
| F4—P1—F3 | 86.5 (4) | C11—C10—H10B | 109.7 |
| F1—P1—F3 | 177.8 (3) | H10A—C10—H10B | 108.2 |
| F6—P1—F2 | 88.1 (3) | N3—C11—C10 | 105.10 (19) |
| F4—P1—F2 | 175.1 (4) | N3—C11—C12 | 110.14 (19) |
| F1—P1—F2 | 87.9 (3) | C10—C11—C12 | 114.0 (2) |
| F3—P1—F2 | 94.1 (4) | N3—C11—H11A | 109.2 |
| F6—P1—F5 | 175.9 (5) | C10—C11—H11A | 109.2 |
| F4—P1—F5 | 87.3 (3) | C12—C11—H11A | 109.2 |
| F1—P1—F5 | 89.7 (3) | C13—C12—C11 | 110.6 (2) |
| F3—P1—F5 | 89.5 (3) | C13—C12—H12A | 109.5 |
| F2—P1—F5 | 87.8 (4) | C11—C12—H12A | 109.5 |
| C9—O1—C10 | 111.0 (2) | C13—C12—H12B | 109.5 |
| C7—N1—N2 | 110.85 (16) | C11—C12—H12B | 109.5 |
| C7—N1—C6 | 128.92 (17) | H12A—C12—H12B | 108.1 |
| N2—N1—C6 | 120.16 (17) | C14—C13—C18 | 118.4 (3) |
| C8—N2—N1 | 103.74 (17) | C14—C13—C12 | 121.3 (2) |
| C7—N3—C8 | 105.68 (17) | C18—C13—C12 | 120.3 (2) |
| C7—N3—C11 | 130.00 (18) | C13—C14—C15 | 120.0 (3) |
| C8—N3—C11 | 124.03 (17) | C13—C14—H14A | 120.0 |
| C6—C1—C2 | 118.5 (3) | C15—C14—H14A | 120.0 |
| C6—C1—H1A | 120.7 | C16—C15—C14 | 120.9 (3) |
| C2—C1—H1A | 120.7 | C16—C15—H15A | 119.6 |
| C3—C2—C1 | 120.6 (3) | C14—C15—H15A | 119.6 |
| C3—C2—H2B | 119.7 | C17—C16—C15 | 119.7 (3) |
| C1—C2—H2B | 119.7 | C17—C16—H16A | 120.1 |
| C4—C3—C2 | 120.1 (2) | C15—C16—H16A | 120.1 |
| C4—C3—H3A | 120.0 | C16—C17—C18 | 120.2 (3) |
| C2—C3—H3A | 120.0 | C16—C17—H17A | 119.9 |
| C3—C4—C5 | 120.7 (3) | C18—C17—H17A | 119.9 |
| C3—C4—H4A | 119.7 | C17—C18—C13 | 120.8 (3) |
| C5—C4—H4A | 119.7 | C17—C18—H18A | 119.6 |
| C6—C5—C4 | 118.4 (3) | C13—C18—H18A | 119.6 |
| C6—C5—H5A | 120.8 |
| H··· | ||||
| P1—F1···Cg1i | 1.57 (1) | 3.03 | 4.235 (11) | 132 |
| P1—F2···Cg1 | 1.57 (1) | 3.19 | 4.102 (11) | 115 |
| P1—F2'···Cg1 | 1.50 (1) | 2.93 | 4.102 (11) | 133 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| P1—F1⋯ | 1.57 (1) | 3.03 | 4.235 (11) | 132 |
| P1—F2⋯ | 1.57 (1) | 3.19 | 4.102 (11) | 115 |
| P1—F2′⋯ | 1.50 (1) | 2.93 | 4.102 (11) | 133 |
Symmetry code: (i) . Cg1 is the centroid of the N1/N2/C8/N3/C7 ring.