| Literature DB >> 21583177 |
Hoong-Kun Fun, Mahesh Padaki, Arun M Isloor, Suchada Chantrapromma.
Abstract
The mol-ecule of the title oxobutanoate derivative, C(12)H(13)ClN(2)O(3), adopts a keto-hydrazo tautomeric form and is roughly planar, the angle between the benzene ring and the mean plane through the hydrazone and aliphatic chain being 1.49 (6)°. This planarity is further aided by the formation of an intra-molecular N-H⋯O hydrogen bond which generates an S(6) ring motif. The aromatic ring and aliphatic chain have a trans configuration with respect to the N-N bond. In the crystal packing, centrosymmetric R(2) (2)(16) dimers are formed through pairs of weak C-H⋯O(3-oxo) inter-actions. These dimers are linked together through weak C-H⋯O(carboxyl-ate C=O) inter-actions into ribbons along the b-axis direction. These ribbons are stacked along the a-axis direction. The crystal also exhibits Cl⋯Cl [3.4988 (6) Å] and C⋯O [3.167 (2)-3.335 (2) Å] short contacts.Entities:
Year: 2009 PMID: 21583177 PMCID: PMC2969699 DOI: 10.1107/S160053680901784X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H13ClN2O3 | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point: 360 K |
| Mo | |
| Cell parameters from 3678 reflections | |
| θ = 1.4–30.0° | |
| α = 88.336 (3)° | µ = 0.30 mm−1 |
| β = 87.033 (3)° | |
| γ = 83.734 (2)° | Needle, yellow |
| 0.39 × 0.11 × 0.06 mm |
| Bruker APEXII CCD area-detector diffractometer | 3678 independent reflections |
| Radiation source: sealed tube | 2732 reflections with |
| graphite | |
| φ and ω scans | θmax = 30.0°, θmin = 1.4° |
| Absorption correction: multi-scan ( | |
| 11030 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3678 reflections | (Δ/σ)max = 0.001 |
| 169 parameters | Δρmax = 0.75 e Å−3 |
| 0 restraints | Δρmin = −0.27 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 120.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 1.05405 (13) | 1.38226 (4) | 0.08494 (3) | 0.02972 (15) | |
| O1 | 0.6525 (4) | 0.66454 (13) | 0.29235 (9) | 0.0307 (3) | |
| O2 | 0.6912 (3) | 0.82739 (12) | 0.19234 (8) | 0.0233 (3) | |
| O3 | 1.2031 (4) | 0.86080 (13) | 0.46009 (9) | 0.0300 (3) | |
| N1 | 1.1619 (4) | 1.03691 (14) | 0.33708 (10) | 0.0199 (3) | |
| N2 | 0.9988 (3) | 0.95997 (13) | 0.29359 (10) | 0.0189 (3) | |
| C1 | 1.1244 (4) | 1.20062 (16) | 0.21705 (11) | 0.0207 (3) | |
| H1A | 1.0155 | 1.1475 | 0.1826 | 0.025* | |
| C2 | 1.1889 (4) | 1.32389 (17) | 0.18746 (12) | 0.0207 (3) | |
| C3 | 1.3528 (4) | 1.40505 (16) | 0.23737 (12) | 0.0226 (4) | |
| H3A | 1.3904 | 1.4880 | 0.2163 | 0.027* | |
| C4 | 1.4591 (4) | 1.35961 (17) | 0.31912 (12) | 0.0229 (4) | |
| H4A | 1.5732 | 1.4120 | 0.3528 | 0.027* | |
| C5 | 1.3972 (4) | 1.23677 (16) | 0.35144 (12) | 0.0206 (3) | |
| H5A | 1.4676 | 1.2069 | 0.4065 | 0.025* | |
| C6 | 1.2282 (4) | 1.15919 (16) | 0.30004 (11) | 0.0185 (3) | |
| C7 | 0.9369 (4) | 0.84466 (16) | 0.32803 (11) | 0.0190 (3) | |
| C8 | 1.0544 (4) | 0.79195 (17) | 0.41344 (12) | 0.0222 (4) | |
| C9 | 1.0059 (5) | 0.65572 (17) | 0.44501 (13) | 0.0260 (4) | |
| H9A | 1.1162 | 0.6367 | 0.4991 | 0.039* | |
| H9B | 1.0961 | 0.5950 | 0.4010 | 0.039* | |
| H9C | 0.7745 | 0.6484 | 0.4551 | 0.039* | |
| C10 | 0.7486 (4) | 0.76823 (16) | 0.27083 (11) | 0.0201 (3) | |
| C11 | 0.5170 (5) | 0.75610 (17) | 0.13154 (12) | 0.0248 (4) | |
| H11A | 0.3238 | 0.7247 | 0.1613 | 0.030* | |
| H11B | 0.6596 | 0.6819 | 0.1089 | 0.030* | |
| C12 | 0.4174 (5) | 0.8497 (2) | 0.05750 (14) | 0.0331 (4) | |
| H12A | 0.3063 | 0.8057 | 0.0148 | 0.050* | |
| H12B | 0.6103 | 0.8817 | 0.0297 | 0.050* | |
| H12C | 0.2719 | 0.9214 | 0.0807 | 0.050* | |
| H1N1 | 1.211 (6) | 1.016 (3) | 0.3940 (17) | 0.043 (7)* |
| Cl1 | 0.0420 (3) | 0.0212 (2) | 0.0261 (2) | −0.00346 (18) | −0.00707 (18) | 0.00680 (16) |
| O1 | 0.0434 (8) | 0.0159 (6) | 0.0353 (7) | −0.0126 (6) | −0.0079 (6) | 0.0038 (5) |
| O2 | 0.0281 (6) | 0.0170 (6) | 0.0259 (6) | −0.0066 (5) | −0.0059 (5) | 0.0027 (5) |
| O3 | 0.0436 (8) | 0.0185 (6) | 0.0290 (7) | −0.0051 (6) | −0.0111 (6) | 0.0037 (5) |
| N1 | 0.0242 (7) | 0.0112 (6) | 0.0246 (8) | −0.0018 (5) | −0.0046 (6) | 0.0020 (5) |
| N2 | 0.0187 (7) | 0.0114 (6) | 0.0264 (7) | −0.0006 (5) | −0.0016 (6) | −0.0006 (5) |
| C1 | 0.0244 (8) | 0.0139 (8) | 0.0245 (8) | −0.0038 (6) | −0.0033 (7) | −0.0013 (6) |
| C2 | 0.0242 (8) | 0.0145 (8) | 0.0225 (8) | 0.0019 (6) | −0.0025 (7) | 0.0036 (6) |
| C3 | 0.0271 (9) | 0.0108 (7) | 0.0303 (9) | −0.0052 (6) | −0.0001 (7) | 0.0018 (6) |
| C4 | 0.0249 (9) | 0.0138 (8) | 0.0310 (9) | −0.0042 (6) | −0.0045 (7) | −0.0044 (7) |
| C5 | 0.0220 (8) | 0.0158 (8) | 0.0238 (8) | 0.0000 (6) | −0.0039 (6) | 0.0007 (6) |
| C6 | 0.0198 (8) | 0.0105 (7) | 0.0249 (8) | −0.0006 (6) | 0.0001 (6) | 0.0008 (6) |
| C7 | 0.0203 (8) | 0.0114 (7) | 0.0253 (8) | −0.0016 (6) | −0.0012 (6) | 0.0014 (6) |
| C8 | 0.0250 (8) | 0.0149 (8) | 0.0257 (9) | 0.0009 (6) | −0.0005 (7) | 0.0019 (6) |
| C9 | 0.0306 (9) | 0.0157 (8) | 0.0310 (9) | −0.0004 (7) | −0.0026 (7) | 0.0052 (7) |
| C10 | 0.0195 (8) | 0.0153 (8) | 0.0254 (8) | −0.0014 (6) | −0.0012 (6) | 0.0005 (6) |
| C11 | 0.0276 (9) | 0.0185 (8) | 0.0292 (9) | −0.0049 (7) | −0.0045 (7) | −0.0031 (7) |
| C12 | 0.0368 (11) | 0.0286 (10) | 0.0349 (11) | −0.0045 (8) | −0.0116 (9) | 0.0023 (8) |
| Cl1—C2 | 1.7432 (18) | C4—H4A | 0.9300 |
| O1—C10 | 1.210 (2) | C5—C6 | 1.391 (2) |
| O2—C10 | 1.340 (2) | C5—H5A | 0.9300 |
| O2—C11 | 1.455 (2) | C7—C8 | 1.472 (2) |
| O3—C8 | 1.241 (2) | C7—C10 | 1.485 (2) |
| N1—N2 | 1.303 (2) | C8—C9 | 1.502 (2) |
| N1—C6 | 1.414 (2) | C9—H9A | 0.9600 |
| N1—H1N1 | 0.91 (3) | C9—H9B | 0.9600 |
| N2—C7 | 1.330 (2) | C9—H9C | 0.9600 |
| C1—C2 | 1.384 (2) | C11—C12 | 1.501 (3) |
| C1—C6 | 1.388 (2) | C11—H11A | 0.9700 |
| C1—H1A | 0.9300 | C11—H11B | 0.9700 |
| C2—C3 | 1.390 (2) | C12—H12A | 0.9600 |
| C3—C4 | 1.385 (2) | C12—H12B | 0.9600 |
| C3—H3A | 0.9300 | C12—H12C | 0.9600 |
| C4—C5 | 1.390 (2) | ||
| C10—O2—C11 | 115.77 (13) | C8—C7—C10 | 121.60 (14) |
| N2—N1—C6 | 120.27 (15) | O3—C8—C7 | 119.29 (15) |
| N2—N1—H1N1 | 119.6 (16) | O3—C8—C9 | 118.90 (16) |
| C6—N1—H1N1 | 119.7 (16) | C7—C8—C9 | 121.80 (15) |
| N1—N2—C7 | 120.48 (15) | C8—C9—H9A | 109.5 |
| C2—C1—C6 | 117.59 (15) | C8—C9—H9B | 109.5 |
| C2—C1—H1A | 121.2 | H9A—C9—H9B | 109.5 |
| C6—C1—H1A | 121.2 | C8—C9—H9C | 109.5 |
| C1—C2—C3 | 122.41 (16) | H9A—C9—H9C | 109.5 |
| C1—C2—Cl1 | 119.40 (13) | H9B—C9—H9C | 109.5 |
| C3—C2—Cl1 | 118.17 (13) | O1—C10—O2 | 123.08 (16) |
| C4—C3—C2 | 118.50 (15) | O1—C10—C7 | 124.24 (16) |
| C4—C3—H3A | 120.8 | O2—C10—C7 | 112.67 (14) |
| C2—C3—H3A | 120.8 | O2—C11—C12 | 106.71 (14) |
| C3—C4—C5 | 120.83 (15) | O2—C11—H11A | 110.4 |
| C3—C4—H4A | 119.6 | C12—C11—H11A | 110.4 |
| C5—C4—H4A | 119.6 | O2—C11—H11B | 110.4 |
| C4—C5—C6 | 118.93 (16) | C12—C11—H11B | 110.4 |
| C4—C5—H5A | 120.5 | H11A—C11—H11B | 108.6 |
| C6—C5—H5A | 120.5 | C11—C12—H12A | 109.5 |
| C1—C6—C5 | 121.71 (15) | C11—C12—H12B | 109.5 |
| C1—C6—N1 | 121.53 (15) | H12A—C12—H12B | 109.5 |
| C5—C6—N1 | 116.75 (15) | C11—C12—H12C | 109.5 |
| N2—C7—C8 | 124.09 (15) | H12A—C12—H12C | 109.5 |
| N2—C7—C10 | 114.25 (15) | H12B—C12—H12C | 109.5 |
| C6—N1—N2—C7 | 179.76 (15) | N1—N2—C7—C8 | −2.8 (3) |
| C6—C1—C2—C3 | 0.4 (3) | N1—N2—C7—C10 | 179.91 (14) |
| C6—C1—C2—Cl1 | −178.31 (13) | N2—C7—C8—O3 | 4.8 (3) |
| C1—C2—C3—C4 | 0.9 (3) | C10—C7—C8—O3 | −178.06 (16) |
| Cl1—C2—C3—C4 | 179.64 (13) | N2—C7—C8—C9 | −173.83 (16) |
| C2—C3—C4—C5 | −1.3 (3) | C10—C7—C8—C9 | 3.3 (3) |
| C3—C4—C5—C6 | 0.4 (3) | C11—O2—C10—O1 | −2.8 (2) |
| C2—C1—C6—C5 | −1.3 (3) | C11—O2—C10—C7 | 178.04 (14) |
| C2—C1—C6—N1 | 177.53 (16) | N2—C7—C10—O1 | −175.72 (16) |
| C4—C5—C6—C1 | 0.9 (3) | C8—C7—C10—O1 | 6.9 (3) |
| C4—C5—C6—N1 | −177.98 (16) | N2—C7—C10—O2 | 3.4 (2) |
| N2—N1—C6—C1 | −0.3 (2) | C8—C7—C10—O2 | −173.96 (15) |
| N2—N1—C6—C5 | 178.63 (15) | C10—O2—C11—C12 | 168.38 (16) |
| H··· | ||||
| N1—H1N1···O3 | 0.91 (3) | 1.87 (3) | 2.564 (2) | 132 (3) |
| C3—H3A···O1i | 0.93 | 2.54 | 3.211 (2) | 129 |
| C5—H5A···O3ii | 0.93 | 2.52 | 3.433 (2) | 166 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.91 (3) | 1.87 (3) | 2.564 (2) | 132 (3) |
| C3—H3 | 0.93 | 2.54 | 3.211 (2) | 129 |
| C5—H5 | 0.93 | 2.52 | 3.433 (2) | 166 |
Symmetry codes: (i) ; (ii) .