| Literature DB >> 21583157 |
Rui Li, Jian-You Shi, Zhen-Yu Ding, Yu-Quan Wei, Jian Ding.
Abstract
The title compound, C(15)H(17)NO(6), is approximately planar, with dihedral angles of 3.11 (4) and 2.12 (4)° between the connecting amino-methyl-ene unit and the planar part of the dioxane ring, and between the dimethoxy-benzyl ring and the amino-methyl-ene group, respectively. The dioxane ring exhibits a half-boat conformation, in which the C atom between the dioxane O atoms is 0.5471 (8) Å out of the plane. The mol-ecule has an intra-molecular N-H⋯O hydrogen bond which may stabilize the planar conformation. In the crystal, weak inter-molecular C-H⋯O hydrogen-bonding contacts, result in the formation of sheets parallel to the ab plane.Entities:
Year: 2009 PMID: 21583157 PMCID: PMC2969602 DOI: 10.1107/S1600536809017413
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H17NO6 | |
| Monoclinic, | Mo |
| Cell parameters from 29 reflections | |
| θ = 4.4–7.7° | |
| µ = 0.11 mm−1 | |
| β = 106.31 (3)° | |
| Block, yellow | |
| 0.44 × 0.38 × 0.18 mm |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 25.4°, θmin = 2.0° |
| graphite | |
| ω/2θ scans | |
| 2852 measured reflections | |
| 2657 independent reflections | 3 standard reflections every 150 reflections |
| 1675 reflections with | intensity decay: 1.8% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2657 reflections | (Δ/σ)max < 0.001 |
| 207 parameters | Δρmax = 0.21 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.0589 (3) | 0.78796 (12) | 0.14968 (8) | 0.0456 (5) | |
| O2 | −0.0296 (3) | 0.60397 (13) | 0.13307 (9) | 0.0489 (5) | |
| O3 | 0.3798 (3) | 0.84242 (14) | 0.22145 (9) | 0.0522 (5) | |
| O4 | 0.2084 (3) | 0.47579 (14) | 0.18214 (10) | 0.0623 (6) | |
| O5 | 1.4467 (3) | 0.80170 (14) | 0.40934 (10) | 0.0544 (5) | |
| O6 | 1.5852 (3) | 0.60587 (14) | 0.42558 (9) | 0.0503 (5) | |
| N1 | 0.7059 (3) | 0.69339 (19) | 0.27469 (10) | 0.0403 (5) | |
| H1N | 0.677 (4) | 0.761 (2) | 0.2721 (13) | 0.046 (8)* | |
| C1 | −0.2969 (4) | 0.7333 (2) | 0.08019 (14) | 0.0523 (7) | |
| H1A | −0.3797 | 0.6767 | 0.0513 | 0.078* | |
| H1B | −0.3242 | 0.7994 | 0.0540 | 0.078* | |
| H1C | −0.3427 | 0.7404 | 0.1229 | 0.078* | |
| C2 | 0.0406 (5) | 0.7062 (3) | 0.03595 (15) | 0.0674 (9) | |
| H2A | 0.1966 | 0.6903 | 0.0517 | 0.101* | |
| H2B | 0.0187 | 0.7749 | 0.0131 | 0.101* | |
| H2C | −0.0343 | 0.6523 | 0.0027 | 0.101* | |
| C3 | −0.0529 (4) | 0.70753 (19) | 0.09947 (12) | 0.0411 (6) | |
| C4 | 0.2670 (4) | 0.7662 (2) | 0.19222 (12) | 0.0389 (6) | |
| C5 | 0.3347 (4) | 0.65633 (19) | 0.20110 (11) | 0.0374 (6) | |
| C6 | 0.1782 (4) | 0.5710 (2) | 0.17241 (13) | 0.0422 (6) | |
| C7 | 0.5461 (4) | 0.6272 (2) | 0.24184 (12) | 0.0398 (6) | |
| H7 | 0.5778 | 0.5544 | 0.2464 | 0.048* | |
| C8 | 0.9280 (4) | 0.66471 (19) | 0.31291 (11) | 0.0374 (6) | |
| C9 | 1.0729 (4) | 0.74811 (19) | 0.34299 (11) | 0.0388 (6) | |
| H9 | 1.0219 | 0.8184 | 0.3384 | 0.047* | |
| C10 | 1.2914 (4) | 0.72663 (18) | 0.37956 (11) | 0.0392 (6) | |
| C11 | 1.3659 (4) | 0.61937 (18) | 0.38805 (11) | 0.0370 (6) | |
| C12 | 1.2204 (4) | 0.5382 (2) | 0.35779 (12) | 0.0442 (6) | |
| H12 | 1.2696 | 0.4676 | 0.3626 | 0.053* | |
| C13 | 1.0014 (4) | 0.5605 (2) | 0.32015 (12) | 0.0445 (6) | |
| H13 | 0.9050 | 0.5051 | 0.3000 | 0.053* | |
| C14 | 1.3812 (5) | 0.9112 (2) | 0.39922 (15) | 0.0588 (8) | |
| H14A | 1.3307 | 0.9266 | 0.3491 | 0.088* | |
| H14B | 1.5056 | 0.9562 | 0.4212 | 0.088* | |
| H14C | 1.2631 | 0.9245 | 0.4205 | 0.088* | |
| C15 | 1.6708 (4) | 0.4995 (2) | 0.43247 (14) | 0.0535 (7) | |
| H15A | 1.5973 | 0.4577 | 0.4603 | 0.080* | |
| H15B | 1.8275 | 0.5012 | 0.4557 | 0.080* | |
| H15C | 1.6451 | 0.4681 | 0.3860 | 0.080* |
| O1 | 0.0390 (10) | 0.0379 (10) | 0.0492 (10) | 0.0012 (8) | −0.0054 (8) | −0.0002 (7) |
| O2 | 0.0380 (10) | 0.0398 (10) | 0.0585 (11) | −0.0059 (8) | −0.0036 (8) | 0.0011 (8) |
| O3 | 0.0468 (11) | 0.0371 (10) | 0.0602 (11) | −0.0067 (8) | −0.0054 (9) | −0.0021 (8) |
| O4 | 0.0517 (12) | 0.0318 (11) | 0.0890 (14) | −0.0007 (8) | −0.0040 (10) | 0.0002 (9) |
| O5 | 0.0456 (11) | 0.0377 (10) | 0.0634 (11) | −0.0014 (8) | −0.0120 (8) | −0.0020 (8) |
| O6 | 0.0388 (10) | 0.0459 (11) | 0.0550 (10) | 0.0053 (8) | −0.0052 (8) | −0.0005 (8) |
| N1 | 0.0345 (12) | 0.0390 (13) | 0.0417 (11) | 0.0005 (9) | 0.0012 (9) | 0.0041 (9) |
| C1 | 0.0384 (15) | 0.0603 (18) | 0.0493 (15) | −0.0006 (13) | −0.0025 (12) | 0.0020 (13) |
| C2 | 0.0541 (18) | 0.097 (2) | 0.0504 (15) | −0.0023 (17) | 0.0130 (13) | −0.0022 (16) |
| C3 | 0.0356 (13) | 0.0432 (14) | 0.0392 (12) | −0.0032 (11) | 0.0017 (10) | 0.0001 (11) |
| C4 | 0.0371 (13) | 0.0408 (14) | 0.0357 (12) | −0.0019 (11) | 0.0050 (10) | 0.0021 (10) |
| C5 | 0.0334 (13) | 0.0383 (13) | 0.0366 (12) | −0.0023 (10) | 0.0034 (10) | 0.0010 (10) |
| C6 | 0.0338 (14) | 0.0417 (15) | 0.0471 (14) | −0.0016 (11) | 0.0045 (11) | −0.0025 (11) |
| C7 | 0.0364 (14) | 0.0424 (14) | 0.0382 (12) | −0.0001 (11) | 0.0063 (11) | 0.0013 (10) |
| C8 | 0.0329 (13) | 0.0404 (14) | 0.0346 (12) | 0.0006 (11) | 0.0024 (9) | 0.0052 (10) |
| C9 | 0.0410 (14) | 0.0334 (13) | 0.0377 (12) | 0.0042 (11) | 0.0038 (10) | 0.0017 (10) |
| C10 | 0.0413 (14) | 0.0378 (14) | 0.0329 (11) | −0.0028 (11) | 0.0011 (10) | −0.0024 (10) |
| C11 | 0.0335 (13) | 0.0419 (14) | 0.0320 (11) | 0.0059 (11) | 0.0031 (10) | 0.0034 (10) |
| C12 | 0.0432 (15) | 0.0351 (14) | 0.0492 (14) | 0.0050 (11) | 0.0045 (11) | 0.0021 (11) |
| C13 | 0.0425 (15) | 0.0371 (14) | 0.0468 (14) | −0.0042 (11) | 0.0011 (11) | 0.0043 (11) |
| C14 | 0.0604 (18) | 0.0389 (15) | 0.0644 (17) | −0.0048 (13) | −0.0030 (14) | −0.0025 (13) |
| C15 | 0.0455 (16) | 0.0508 (16) | 0.0572 (15) | 0.0149 (13) | 0.0030 (12) | 0.0028 (13) |
| O1—C4 | 1.363 (3) | C2—H2C | 0.9600 |
| O1—C3 | 1.441 (3) | C4—C5 | 1.432 (3) |
| O2—C6 | 1.376 (3) | C5—C7 | 1.389 (3) |
| O2—C3 | 1.439 (3) | C5—C6 | 1.450 (3) |
| O3—C4 | 1.227 (3) | C7—H7 | 0.9300 |
| O4—C6 | 1.211 (3) | C8—C13 | 1.374 (4) |
| O5—C10 | 1.359 (3) | C8—C9 | 1.398 (3) |
| O5—C14 | 1.425 (3) | C9—C10 | 1.382 (3) |
| O6—C11 | 1.375 (3) | C9—H9 | 0.9300 |
| O6—C15 | 1.424 (3) | C10—C11 | 1.413 (3) |
| N1—C7 | 1.318 (3) | C11—C12 | 1.380 (3) |
| N1—C8 | 1.428 (3) | C12—C13 | 1.392 (4) |
| N1—H1N | 0.86 (3) | C12—H12 | 0.9300 |
| C1—C3 | 1.504 (4) | C13—H13 | 0.9300 |
| C1—H1A | 0.9600 | C14—H14A | 0.9600 |
| C1—H1B | 0.9600 | C14—H14B | 0.9600 |
| C1—H1C | 0.9600 | C14—H14C | 0.9600 |
| C2—C3 | 1.513 (4) | C15—H15A | 0.9600 |
| C2—H2A | 0.9600 | C15—H15B | 0.9600 |
| C2—H2B | 0.9600 | C15—H15C | 0.9600 |
| C4—O1—C3 | 118.37 (18) | N1—C7—C5 | 126.0 (2) |
| C6—O2—C3 | 118.82 (19) | N1—C7—H7 | 117.0 |
| C10—O5—C14 | 117.26 (19) | C5—C7—H7 | 117.0 |
| C11—O6—C15 | 117.28 (19) | C13—C8—C9 | 120.2 (2) |
| C7—N1—C8 | 126.4 (2) | C13—C8—N1 | 122.7 (2) |
| C7—N1—H1N | 117.7 (17) | C9—C8—N1 | 117.1 (2) |
| C8—N1—H1N | 115.9 (17) | C10—C9—C8 | 120.4 (2) |
| C3—C1—H1A | 109.5 | C10—C9—H9 | 119.8 |
| C3—C1—H1B | 109.5 | C8—C9—H9 | 119.8 |
| H1A—C1—H1B | 109.5 | O5—C10—C9 | 125.1 (2) |
| C3—C1—H1C | 109.5 | O5—C10—C11 | 115.5 (2) |
| H1A—C1—H1C | 109.5 | C9—C10—C11 | 119.5 (2) |
| H1B—C1—H1C | 109.5 | O6—C11—C12 | 125.4 (2) |
| C3—C2—H2A | 109.5 | O6—C11—C10 | 115.3 (2) |
| C3—C2—H2B | 109.5 | C12—C11—C10 | 119.3 (2) |
| H2A—C2—H2B | 109.5 | C11—C12—C13 | 121.0 (2) |
| C3—C2—H2C | 109.5 | C11—C12—H12 | 119.5 |
| H2A—C2—H2C | 109.5 | C13—C12—H12 | 119.5 |
| H2B—C2—H2C | 109.5 | C8—C13—C12 | 119.7 (2) |
| O2—C3—O1 | 110.38 (17) | C8—C13—H13 | 120.1 |
| O2—C3—C1 | 105.8 (2) | C12—C13—H13 | 120.1 |
| O1—C3—C1 | 106.7 (2) | O5—C14—H14A | 109.5 |
| O2—C3—C2 | 110.5 (2) | O5—C14—H14B | 109.5 |
| O1—C3—C2 | 109.8 (2) | H14A—C14—H14B | 109.5 |
| C1—C3—C2 | 113.5 (2) | O5—C14—H14C | 109.5 |
| O3—C4—O1 | 117.1 (2) | H14A—C14—H14C | 109.5 |
| O3—C4—C5 | 125.1 (2) | H14B—C14—H14C | 109.5 |
| O1—C4—C5 | 117.8 (2) | O6—C15—H15A | 109.5 |
| C7—C5—C4 | 121.5 (2) | O6—C15—H15B | 109.5 |
| C7—C5—C6 | 117.6 (2) | H15A—C15—H15B | 109.5 |
| C4—C5—C6 | 120.7 (2) | O6—C15—H15C | 109.5 |
| O4—C6—O2 | 117.6 (2) | H15A—C15—H15C | 109.5 |
| O4—C6—C5 | 127.0 (2) | H15B—C15—H15C | 109.5 |
| O2—C6—C5 | 115.4 (2) | ||
| C6—O2—C3—O1 | −48.6 (3) | C6—C5—C7—N1 | −176.7 (2) |
| C6—O2—C3—C1 | −163.7 (2) | C7—N1—C8—C13 | −0.4 (4) |
| C6—O2—C3—C2 | 73.1 (3) | C7—N1—C8—C9 | 179.0 (2) |
| C4—O1—C3—O2 | 45.3 (3) | C13—C8—C9—C10 | 0.7 (4) |
| C4—O1—C3—C1 | 159.8 (2) | N1—C8—C9—C10 | −178.8 (2) |
| C4—O1—C3—C2 | −76.8 (3) | C14—O5—C10—C9 | −2.9 (4) |
| C3—O1—C4—O3 | 162.7 (2) | C14—O5—C10—C11 | 177.2 (2) |
| C3—O1—C4—C5 | −19.1 (3) | C8—C9—C10—O5 | 178.4 (2) |
| O3—C4—C5—C7 | −3.9 (4) | C8—C9—C10—C11 | −1.7 (3) |
| O1—C4—C5—C7 | 178.1 (2) | C15—O6—C11—C12 | 1.5 (3) |
| O3—C4—C5—C6 | 171.1 (2) | C15—O6—C11—C10 | −177.0 (2) |
| O1—C4—C5—C6 | −6.9 (3) | O5—C10—C11—O6 | 0.3 (3) |
| C3—O2—C6—O4 | −158.5 (2) | C9—C10—C11—O6 | −179.6 (2) |
| C3—O2—C6—C5 | 24.7 (3) | O5—C10—C11—C12 | −178.3 (2) |
| C7—C5—C6—O4 | 2.9 (4) | C9—C10—C11—C12 | 1.9 (4) |
| C4—C5—C6—O4 | −172.3 (3) | O6—C11—C12—C13 | −179.4 (2) |
| C7—C5—C6—O2 | 179.3 (2) | C10—C11—C12—C13 | −1.0 (4) |
| C4—C5—C6—O2 | 4.2 (3) | C9—C8—C13—C12 | 0.2 (4) |
| C8—N1—C7—C5 | −175.7 (2) | N1—C8—C13—C12 | 179.6 (2) |
| C4—C5—C7—N1 | −1.6 (4) | C11—C12—C13—C8 | 0.0 (4) |
| H··· | ||||
| N1—H1N···O3 | 0.86 (3) | 2.11 (3) | 2.744 (3) | 130 (2) |
| C9—H9···O4i | 0.93 | 2.40 | 3.309 (4) | 164 |
| C15—H15C···O3ii | 0.96 | 2.59 | 3.528 (4) | 166 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 (3) | 2.11 (3) | 2.744 (3) | 130 (2) |
| C9—H9⋯O4i | 0.93 | 2.40 | 3.309 (4) | 164 |
| C15—H15 | 0.96 | 2.59 | 3.528 (4) | 166 |
Symmetry codes: (i) ; (ii) .