| Literature DB >> 21583156 |
Rui Li, Zhen-Yu Ding, Yu-Quan Wei, Jian Ding.
Abstract
In the title compound, C(15)H(15)NO(5), the six-membered dioxane ring assumes an envelope conformation with the dimethyl substituted C atom as the flap atom. An intra-molecular N-H⋯O inter-action is also present. In the crystal structure the mol-ecules are linked via C-H⋯O hydrogen bonds into supra-molecular chains along the b axis.Entities:
Year: 2009 PMID: 21583156 PMCID: PMC2969769 DOI: 10.1107/S1600536809017425
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H15NO5 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 25 reflections | |
| θ = 4.4–7.4° | |
| µ = 0.10 mm−1 | |
| α = 82.79 (4)° | |
| β = 83.19 (4)° | Block, colourless |
| γ = 86.03 (4)° | 0.44 × 0.36 × 0.32 mm |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 25.5°, θmin = 1.5° |
| graphite | |
| ω/2θ scans | |
| 2894 measured reflections | |
| 2621 independent reflections | 3 standard reflections every 100 reflections |
| 1399 reflections with | intensity decay: 1.8% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2621 reflections | (Δ/σ)max < 0.001 |
| 197 parameters | Δρmax = 0.23 e Å−3 |
| 0 restraints | Δρmin = −0.34 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.4606 (3) | 0.5224 (2) | 0.87501 (13) | 0.0548 (6) | |
| O2 | 0.4847 (3) | 0.3153 (3) | 0.75537 (13) | 0.0585 (6) | |
| O3 | 0.5363 (3) | 0.8104 (3) | 0.83800 (15) | 0.0713 (7) | |
| O4 | 0.5696 (3) | 0.4044 (3) | 0.60005 (14) | 0.0688 (7) | |
| O5 | 0.9300 (3) | 1.4570 (3) | 0.25900 (17) | 0.0767 (7) | |
| N1 | 0.6950 (3) | 0.7445 (3) | 0.54722 (17) | 0.0485 (6) | |
| H1N | 0.674 (4) | 0.644 (5) | 0.528 (2) | 0.066 (9)* | |
| C1 | 0.3511 (5) | 0.2250 (4) | 0.9154 (2) | 0.0677 (9) | |
| H1A | 0.3605 | 0.2286 | 0.9836 | 0.101* | |
| H1B | 0.3674 | 0.1003 | 0.9010 | 0.101* | |
| H1C | 0.2284 | 0.2754 | 0.8999 | 0.101* | |
| C2 | 0.6988 (5) | 0.2750 (5) | 0.8795 (2) | 0.0708 (9) | |
| H2A | 0.7894 | 0.3472 | 0.8371 | 0.106* | |
| H2B | 0.7236 | 0.1478 | 0.8706 | 0.106* | |
| H2C | 0.7094 | 0.2910 | 0.9463 | 0.106* | |
| C3 | 0.5022 (4) | 0.3356 (4) | 0.8554 (2) | 0.0504 (7) | |
| C4 | 0.5331 (4) | 0.6609 (4) | 0.8097 (2) | 0.0503 (7) | |
| C5 | 0.5861 (4) | 0.6195 (3) | 0.71100 (18) | 0.0440 (6) | |
| C6 | 0.5512 (4) | 0.4421 (4) | 0.6835 (2) | 0.0486 (7) | |
| C7 | 0.6522 (4) | 0.7568 (3) | 0.64119 (19) | 0.0443 (7) | |
| H7 | 0.6681 | 0.8692 | 0.6625 | 0.053* | |
| C8 | 0.7584 (4) | 0.8835 (4) | 0.47359 (19) | 0.0443 (7) | |
| C9 | 0.8222 (4) | 0.8338 (4) | 0.3821 (2) | 0.0561 (8) | |
| H9 | 0.8262 | 0.7113 | 0.3711 | 0.067* | |
| C10 | 0.8804 (4) | 0.9674 (4) | 0.3063 (2) | 0.0562 (8) | |
| H10 | 0.9233 | 0.9337 | 0.2447 | 0.067* | |
| C11 | 0.8752 (4) | 1.1500 (4) | 0.3217 (2) | 0.0475 (7) | |
| C12 | 0.8132 (4) | 1.1971 (4) | 0.4143 (2) | 0.0510 (7) | |
| H12 | 0.8113 | 1.3192 | 0.4256 | 0.061* | |
| C13 | 0.7541 (4) | 1.0661 (4) | 0.4903 (2) | 0.0491 (7) | |
| H13 | 0.7118 | 1.0998 | 0.5521 | 0.059* | |
| C14 | 0.9294 (4) | 1.2990 (4) | 0.2415 (2) | 0.0558 (8) | |
| C15 | 0.9783 (5) | 1.2522 (5) | 0.1391 (2) | 0.0731 (10) | |
| H15A | 1.0042 | 1.3622 | 0.0958 | 0.110* | |
| H15B | 0.8735 | 1.1954 | 0.1195 | 0.110* | |
| H15C | 1.0885 | 1.1690 | 0.1365 | 0.110* |
| O1 | 0.0800 (14) | 0.0361 (11) | 0.0476 (11) | 0.0014 (9) | −0.0018 (10) | −0.0097 (9) |
| O2 | 0.0936 (15) | 0.0361 (11) | 0.0467 (11) | −0.0137 (10) | −0.0013 (10) | −0.0087 (9) |
| O3 | 0.125 (2) | 0.0320 (11) | 0.0598 (12) | −0.0023 (11) | −0.0121 (12) | −0.0163 (9) |
| O4 | 0.1213 (19) | 0.0381 (11) | 0.0475 (12) | −0.0173 (12) | 0.0040 (11) | −0.0130 (9) |
| O5 | 0.0993 (18) | 0.0370 (13) | 0.0893 (17) | −0.0106 (11) | 0.0019 (13) | 0.0012 (11) |
| N1 | 0.0641 (16) | 0.0299 (13) | 0.0525 (15) | −0.0091 (11) | −0.0043 (12) | −0.0071 (11) |
| C1 | 0.087 (2) | 0.056 (2) | 0.0591 (19) | −0.0135 (17) | 0.0026 (17) | −0.0095 (16) |
| C2 | 0.078 (2) | 0.053 (2) | 0.078 (2) | 0.0051 (16) | −0.0068 (18) | 0.0021 (16) |
| C3 | 0.071 (2) | 0.0296 (14) | 0.0505 (16) | 0.0001 (13) | −0.0032 (14) | −0.0068 (12) |
| C4 | 0.0647 (19) | 0.0389 (16) | 0.0488 (16) | 0.0057 (13) | −0.0135 (14) | −0.0092 (13) |
| C5 | 0.0512 (16) | 0.0371 (15) | 0.0455 (15) | 0.0007 (12) | −0.0106 (13) | −0.0086 (12) |
| C6 | 0.0670 (19) | 0.0346 (15) | 0.0435 (16) | −0.0027 (13) | −0.0018 (13) | −0.0065 (12) |
| C7 | 0.0527 (16) | 0.0300 (14) | 0.0525 (17) | −0.0017 (12) | −0.0121 (13) | −0.0086 (12) |
| C8 | 0.0449 (16) | 0.0374 (15) | 0.0520 (16) | −0.0071 (12) | −0.0067 (12) | −0.0067 (12) |
| C9 | 0.069 (2) | 0.0416 (16) | 0.0597 (18) | −0.0133 (14) | 0.0005 (15) | −0.0137 (14) |
| C10 | 0.0639 (19) | 0.0526 (19) | 0.0525 (17) | −0.0094 (15) | 0.0036 (14) | −0.0140 (14) |
| C11 | 0.0434 (16) | 0.0431 (16) | 0.0548 (17) | −0.0042 (12) | −0.0029 (13) | −0.0029 (13) |
| C12 | 0.0608 (19) | 0.0312 (14) | 0.0611 (18) | −0.0040 (12) | −0.0069 (14) | −0.0048 (13) |
| C13 | 0.0588 (18) | 0.0377 (15) | 0.0518 (16) | 0.0021 (13) | −0.0048 (13) | −0.0129 (13) |
| C14 | 0.0464 (17) | 0.0531 (19) | 0.066 (2) | 0.0003 (14) | −0.0062 (14) | −0.0001 (15) |
| C15 | 0.083 (2) | 0.063 (2) | 0.065 (2) | −0.0021 (18) | 0.0077 (18) | 0.0072 (16) |
| O1—C4 | 1.361 (3) | C5—C7 | 1.374 (4) |
| O1—C3 | 1.438 (3) | C5—C6 | 1.450 (4) |
| O2—C6 | 1.342 (3) | C7—H7 | 0.9300 |
| O2—C3 | 1.434 (3) | C8—C9 | 1.380 (4) |
| O3—C4 | 1.216 (3) | C8—C13 | 1.389 (4) |
| O4—C6 | 1.212 (3) | C9—C10 | 1.390 (4) |
| O5—C14 | 1.217 (3) | C9—H9 | 0.9300 |
| N1—C7 | 1.315 (3) | C10—C11 | 1.383 (4) |
| N1—C8 | 1.408 (3) | C10—H10 | 0.9300 |
| N1—H1N | 0.85 (3) | C11—C12 | 1.384 (4) |
| C1—C3 | 1.498 (4) | C11—C14 | 1.495 (4) |
| C1—H1A | 0.9600 | C12—C13 | 1.383 (4) |
| C1—H1B | 0.9600 | C12—H12 | 0.9300 |
| C1—H1C | 0.9600 | C13—H13 | 0.9300 |
| C2—C3 | 1.499 (4) | C14—C15 | 1.497 (4) |
| C2—H2A | 0.9600 | C15—H15A | 0.9600 |
| C2—H2B | 0.9600 | C15—H15B | 0.9600 |
| C2—H2C | 0.9600 | C15—H15C | 0.9600 |
| C4—C5 | 1.438 (3) | ||
| C4—O1—C3 | 119.3 (2) | O2—C6—C5 | 117.1 (2) |
| C6—O2—C3 | 120.1 (2) | N1—C7—C5 | 126.2 (2) |
| C7—N1—C8 | 127.6 (2) | N1—C7—H7 | 116.9 |
| C7—N1—H1N | 116 (2) | C5—C7—H7 | 116.9 |
| C8—N1—H1N | 116 (2) | C9—C8—C13 | 120.2 (3) |
| C3—C1—H1A | 109.5 | C9—C8—N1 | 117.8 (3) |
| C3—C1—H1B | 109.5 | C13—C8—N1 | 122.0 (2) |
| H1A—C1—H1B | 109.5 | C8—C9—C10 | 119.7 (3) |
| C3—C1—H1C | 109.5 | C8—C9—H9 | 120.1 |
| H1A—C1—H1C | 109.5 | C10—C9—H9 | 120.1 |
| H1B—C1—H1C | 109.5 | C11—C10—C9 | 120.7 (3) |
| C3—C2—H2A | 109.5 | C11—C10—H10 | 119.7 |
| C3—C2—H2B | 109.5 | C9—C10—H10 | 119.7 |
| H2A—C2—H2B | 109.5 | C10—C11—C12 | 118.8 (3) |
| C3—C2—H2C | 109.5 | C10—C11—C14 | 122.5 (3) |
| H2A—C2—H2C | 109.5 | C12—C11—C14 | 118.7 (3) |
| H2B—C2—H2C | 109.5 | C13—C12—C11 | 121.3 (3) |
| O2—C3—O1 | 111.4 (2) | C13—C12—H12 | 119.4 |
| O2—C3—C1 | 105.9 (2) | C11—C12—H12 | 119.4 |
| O1—C3—C1 | 106.4 (2) | C12—C13—C8 | 119.3 (3) |
| O2—C3—C2 | 110.2 (2) | C12—C13—H13 | 120.4 |
| O1—C3—C2 | 109.4 (2) | C8—C13—H13 | 120.4 |
| C1—C3—C2 | 113.4 (3) | O5—C14—C11 | 120.4 (3) |
| O3—C4—O1 | 117.5 (2) | O5—C14—C15 | 120.4 (3) |
| O3—C4—C5 | 125.9 (3) | C11—C14—C15 | 119.2 (3) |
| O1—C4—C5 | 116.5 (2) | C14—C15—H15A | 109.5 |
| C7—C5—C4 | 118.8 (2) | C14—C15—H15B | 109.5 |
| C7—C5—C6 | 120.4 (2) | H15A—C15—H15B | 109.5 |
| C4—C5—C6 | 120.5 (2) | C14—C15—H15C | 109.5 |
| O4—C6—O2 | 118.4 (2) | H15A—C15—H15C | 109.5 |
| O4—C6—C5 | 124.5 (3) | H15B—C15—H15C | 109.5 |
| H··· | ||||
| N1—H1N···O4 | 0.84 (4) | 2.05 (3) | 2.699 (3) | 133 (2) |
| C1—H1B···O3i | 0.96 | 2.57 | 3.480 (4) | 158 |
| C9—H9···O5i | 0.93 | 2.59 | 3.429 (4) | 150 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.84 (4) | 2.05 (3) | 2.699 (3) | 133 (2) |
| C1—H1 | 0.96 | 2.57 | 3.480 (4) | 158 |
| C9—H9⋯O5i | 0.93 | 2.59 | 3.429 (4) | 150 |
Symmetry code: (i) .