| Literature DB >> 21583120 |
Manuela Ramos Silva, Joana A Silva, Ana Matos Beja, Abilio J F N Sobral.
Abstract
The title compound, C(20)H(26)N(4), is composed of two (6-methyl-2-pyridyl)methyl-ene units linked by a 1,6-diamine hexane chain. The mol-ecule has C(i) symmetry with the inversion center situated at the mid-point of the central C-C bond. The alkyl chain has an all-trans conformation, with all the non-H atoms sharing the same plane [maximum deviation 0.004 (3) Å]. The pyridylmethyl-ene groups are also planar [maximum deviation 0.009 (3) Å], making an angle of 53.78 (19)° with the hexane chain plane. In the crystal, the mol-ecules assemble in layers, stacking along the a axis. The stacks are hold together by attractive interactions between π electron systems.Entities:
Year: 2009 PMID: 21583120 PMCID: PMC2969618 DOI: 10.1107/S1600536809016730
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H26N4 | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 546 reflections |
| θ = 3.2–20.3° | |
| µ = 0.07 mm−1 | |
| Prism, yellow | |
| 0.17 × 0.12 × 0.09 mm |
| Bruker APEX CCD area-detector diffractometer | 2308 independent reflections |
| Radiation source: fine-focus sealed tube | 742 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.3°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 7591 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2308 reflections | (Δ/σ)max < 0.001 |
| 111 parameters | Δρmax = 0.12 e Å−3 |
| 0 restraints | Δρmin = −0.14 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N2 | 0.1193 (3) | 0.29540 (19) | 0.10261 (10) | 0.0731 (7) | |
| C1 | 0.0485 (4) | 0.4665 (2) | 0.14588 (13) | 0.0633 (8) | |
| N1 | −0.0101 (3) | 0.56245 (18) | 0.12827 (10) | 0.0667 (7) | |
| C5 | −0.0300 (4) | 0.6357 (2) | 0.17502 (13) | 0.0683 (8) | |
| C10 | 0.0506 (4) | 0.05151 (18) | −0.00364 (12) | 0.0711 (8) | |
| H10A | 0.0034 | 0.0880 | −0.0418 | 0.085* | |
| H10B | 0.1796 | 0.0366 | −0.0115 | 0.085* | |
| C9 | 0.0355 (4) | 0.1241 (2) | 0.05473 (12) | 0.0719 (8) | |
| H9A | −0.0932 | 0.1400 | 0.0624 | 0.086* | |
| H9B | 0.0820 | 0.0877 | 0.0930 | 0.086* | |
| C2 | 0.0901 (4) | 0.4398 (2) | 0.20945 (14) | 0.0792 (9) | |
| H2 | 0.1312 | 0.3724 | 0.2199 | 0.095* | |
| C7 | 0.0688 (4) | 0.3890 (2) | 0.09307 (13) | 0.0674 (8) | |
| H7 | 0.0430 | 0.4102 | 0.0505 | 0.081* | |
| C8 | 0.1391 (4) | 0.2259 (2) | 0.04644 (12) | 0.0760 (9) | |
| H8A | 0.2684 | 0.2104 | 0.0399 | 0.091* | |
| H8B | 0.0945 | 0.2619 | 0.0077 | 0.091* | |
| C6 | −0.0943 (5) | 0.7425 (2) | 0.15397 (13) | 0.0892 (10) | |
| H6A | 0.0012 | 0.7933 | 0.1616 | 0.134* | |
| H6B | −0.2018 | 0.7617 | 0.1785 | 0.134* | |
| H6C | −0.1238 | 0.7411 | 0.1082 | 0.134* | |
| C4 | 0.0072 (4) | 0.6140 (2) | 0.23978 (14) | 0.0762 (9) | |
| H4 | −0.0095 | 0.6658 | 0.2715 | 0.091* | |
| C3 | 0.0690 (4) | 0.5156 (3) | 0.25715 (14) | 0.0852 (10) | |
| H3 | 0.0963 | 0.5002 | 0.3005 | 0.102* |
| N2 | 0.0935 (18) | 0.0568 (16) | 0.0689 (14) | −0.0005 (13) | −0.0027 (13) | −0.0059 (12) |
| C1 | 0.071 (2) | 0.061 (2) | 0.0577 (16) | −0.0117 (15) | 0.0005 (15) | −0.0023 (14) |
| N1 | 0.0852 (17) | 0.0543 (15) | 0.0605 (13) | −0.0067 (13) | 0.0013 (12) | −0.0032 (12) |
| C5 | 0.080 (2) | 0.064 (2) | 0.0614 (17) | −0.0082 (16) | −0.0006 (16) | −0.0020 (15) |
| C10 | 0.091 (2) | 0.0550 (18) | 0.0675 (16) | 0.0042 (15) | 0.0070 (17) | 0.0000 (14) |
| C9 | 0.091 (2) | 0.0575 (18) | 0.0677 (17) | 0.0042 (17) | 0.0051 (16) | −0.0029 (14) |
| C2 | 0.101 (3) | 0.067 (2) | 0.0701 (19) | −0.0010 (18) | −0.0052 (18) | −0.0026 (17) |
| C7 | 0.081 (2) | 0.061 (2) | 0.0605 (16) | −0.0091 (16) | −0.0001 (15) | −0.0005 (15) |
| C8 | 0.097 (2) | 0.065 (2) | 0.0654 (17) | 0.0011 (17) | 0.0064 (16) | −0.0070 (15) |
| C6 | 0.130 (3) | 0.061 (2) | 0.0771 (18) | 0.0014 (19) | 0.000 (2) | −0.0048 (16) |
| C4 | 0.095 (2) | 0.068 (2) | 0.0651 (19) | −0.0068 (19) | −0.0056 (16) | −0.0116 (15) |
| C3 | 0.114 (3) | 0.081 (2) | 0.0602 (17) | −0.004 (2) | −0.0119 (18) | 0.0020 (18) |
| N2—C7 | 1.257 (3) | C9—H9A | 0.9700 |
| N2—C8 | 1.455 (3) | C9—H9B | 0.9700 |
| C1—N1 | 1.338 (3) | C2—C3 | 1.377 (4) |
| C1—C2 | 1.377 (4) | C2—H2 | 0.9300 |
| C1—C7 | 1.467 (4) | C7—H7 | 0.9300 |
| N1—C5 | 1.340 (3) | C8—H8A | 0.9700 |
| C5—C4 | 1.380 (4) | C8—H8B | 0.9700 |
| C5—C6 | 1.495 (4) | C6—H6A | 0.9600 |
| C10—C10i | 1.506 (5) | C6—H6B | 0.9600 |
| C10—C9 | 1.511 (3) | C6—H6C | 0.9600 |
| C10—H10A | 0.9700 | C4—C3 | 1.373 (4) |
| C10—H10B | 0.9700 | C4—H4 | 0.9300 |
| C9—C8 | 1.503 (3) | C3—H3 | 0.9300 |
| C7—N2—C8 | 118.5 (2) | C1—C2—H2 | 120.9 |
| N1—C1—C2 | 123.2 (3) | N2—C7—C1 | 123.1 (3) |
| N1—C1—C7 | 116.2 (2) | N2—C7—H7 | 118.5 |
| C2—C1—C7 | 120.6 (3) | C1—C7—H7 | 118.5 |
| C1—N1—C5 | 118.1 (2) | N2—C8—C9 | 112.4 (2) |
| N1—C5—C4 | 121.7 (3) | N2—C8—H8A | 109.1 |
| N1—C5—C6 | 117.1 (2) | C9—C8—H8A | 109.1 |
| C4—C5—C6 | 121.2 (3) | N2—C8—H8B | 109.1 |
| C10i—C10—C9 | 114.4 (3) | C9—C8—H8B | 109.1 |
| C10i—C10—H10A | 108.7 | H8A—C8—H8B | 107.9 |
| C9—C10—H10A | 108.7 | C5—C6—H6A | 109.5 |
| C10i—C10—H10B | 108.7 | C5—C6—H6B | 109.5 |
| C9—C10—H10B | 108.7 | H6A—C6—H6B | 109.5 |
| H10A—C10—H10B | 107.6 | C5—C6—H6C | 109.5 |
| C8—C9—C10 | 113.3 (2) | H6A—C6—H6C | 109.5 |
| C8—C9—H9A | 108.9 | H6B—C6—H6C | 109.5 |
| C10—C9—H9A | 108.9 | C3—C4—C5 | 119.6 (3) |
| C8—C9—H9B | 108.9 | C3—C4—H4 | 120.2 |
| C10—C9—H9B | 108.9 | C5—C4—H4 | 120.2 |
| H9A—C9—H9B | 107.7 | C4—C3—C2 | 119.1 (3) |
| C3—C2—C1 | 118.3 (3) | C4—C3—H3 | 120.5 |
| C3—C2—H2 | 120.9 | C2—C3—H3 | 120.5 |
| C2—C1—N1—C5 | −0.4 (4) | N1—C1—C7—N2 | −178.7 (3) |
| C7—C1—N1—C5 | −179.8 (2) | C2—C1—C7—N2 | 1.9 (4) |
| C1—N1—C5—C4 | −0.3 (4) | C7—N2—C8—C9 | −127.9 (3) |
| C1—N1—C5—C6 | 179.6 (3) | C10—C9—C8—N2 | 178.8 (2) |
| C10i—C10—C9—C8 | 179.5 (3) | N1—C5—C4—C3 | 1.0 (4) |
| N1—C1—C2—C3 | 0.4 (5) | C6—C5—C4—C3 | −178.9 (3) |
| C7—C1—C2—C3 | 179.9 (3) | C5—C4—C3—C2 | −0.9 (5) |
| C8—N2—C7—C1 | −178.5 (2) | C1—C2—C3—C4 | 0.3 (5) |