Literature DB >> 21583108

2,8-Dimethyl-tricyclo-[5.3.1.1]dodecane-syn-2,syn-8-diol-propanoic acid (1/1).

Yuji Mizobe1, Roger Bishop, Donald C Craig, Marcia L Scudder.   

Abstract

The racemic title compound, C(14)H(24)O(2)·C(3)H(6)O(2), crystallizes in the monoclinic space group P2(1)/c as a 1:1 diol/carboxylic acid cocrystal, A-B. The lattice incorporates infinite chains of the alcohol-carboxylic acid-alcohol supra-molecular synthon, (⋯O-H⋯O=C(R)-O-H⋯O-H⋯), in which the hydrogen-bonded mol-ecules (A-B-A)(n) surround a pseudo-threefold screw axis. The carboxylic acid group functions like an extended alcohol hydr-oxy group. Each diol, A, takes part in two such threefold screw arrangements, leading to a hydrogen-bonded layer structure, with adjacent layers containing diol mol-ecules of opposite handedness. The central C atom of the propano bridge is disordered over two sites of occupancies 0.75 (1) and 0.25 (1). The methyl group of the propanoic acid molecule is disordered over two sites of occupancies 0.68 (1) and 0.32 (1).

Entities:  

Year:  2009        PMID: 21583108      PMCID: PMC2969646          DOI: 10.1107/S1600536809016547

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature on the diol component of the title compound, see: Bishop (2009 ▶); Dance et al. (1986 ▶). Two members of this diol family have been found previously to form such 1:1 compounds with carboxylic acids, see: Alshahateet et al. (2004 ▶); Yue et al. (2006 ▶).

Experimental

Crystal data

C14H24O2·C3H6O2 M = 298.4 Monoclinic, a = 7.390 (4) Å b = 13.218 (5) Å c = 18.469 (8) Å β = 110.23 (2)° V = 1693 (1) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 294 K 0.10 mm (radius)

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: none 3188 measured reflections 2942 independent reflections 1786 reflections with I > 2σ(I) R int = 0.014 1 standard reflections frequency: 30 min intensity decay: 29%

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.070 S = 1.32 2942 reflections 199 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.41 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: local program; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: RAELS (Rae, 2000 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and CrystalMaker (Palmer, 2005 ▶); software used to prepare material for publication: local programs. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809016547/hg2504sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016547/hg2504Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H24O2·C3H6O2F(000) = 656.0
Mr = 298.4Dx = 1.17 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 7.390 (4) ÅCell parameters from 11 reflections
b = 13.218 (5) Åθ = 11–12°
c = 18.469 (8) ŵ = 0.08 mm1
β = 110.23 (2)°T = 294 K
V = 1693 (1) Å3Irregular, colourless
Z = 40.10 mm (radius)
Enraf–Nonius CAD-4 diffractometerθmax = 25°
ω/2θ scansh = 0→8
3188 measured reflectionsk = 0→15
2942 independent reflectionsl = −22→22
1786 reflections with I > 2σ(I)1 standard reflections every 30 min
Rint = 0.014 intensity decay: 29%
Refinement on F0 restraints
R[F2 > 2σ(F2)] = 0.056H-atom parameters constrained
wR(F2) = 0.070w = 1/[σ2(F) + 0.0004F2]
S = 1.32(Δ/σ)max = 0.003
2942 reflectionsΔρmax = 0.39 e Å3
199 parametersΔρmin = −0.41 e Å3
xyzUiso*/UeqOcc. (<1)
O10.7617 (2)0.2866 (1)0.2685 (1)0.0659 (5)
O20.4331 (2)0.66382 (11)0.16336 (9)0.0559 (5)
C10.4896 (3)0.3428 (2)0.1636 (1)0.0495 (6)
C20.7107 (3)0.3385 (2)0.1951 (1)0.0496 (6)
C30.8088 (3)0.4441 (2)0.2035 (1)0.0513 (6)
C40.6996 (3)0.5155 (2)0.1356 (1)0.0503 (6)
C50.4789 (3)0.5105 (2)0.1032 (1)0.0475 (6)
C60.3662 (3)0.5599 (2)0.1493 (1)0.0472 (6)
C70.3899 (3)0.5039 (2)0.2262 (1)0.0528 (6)
C80.3898 (4)0.3878 (2)0.2161 (1)0.0579 (7)
C90.4195 (3)0.4001 (2)0.0871 (1)0.0536 (6)
C100.7824 (4)0.2728 (2)0.1425 (2)0.0718 (8)
C110.1519 (4)0.5658 (2)0.1009 (2)0.0656 (8)
C120.8701 (4)0.4943 (2)0.2831 (2)0.0695 (8)
C130.7455 (5)0.5768 (3)0.2979 (2)0.067 (1)0.75
C13'0.7388 (9)0.4872 (7)0.3304 (4)0.067 (1)0.25
C140.5481 (5)0.5443 (2)0.2994 (1)0.0707 (8)
O1P0.5377 (3)0.7775 (1)0.0674 (1)0.0740 (6)
O2P0.8391 (3)0.7734 (2)0.1482 (1)0.0801 (6)
C1P0.7228 (4)0.7995 (2)0.0878 (2)0.0667 (7)
C2P0.7710 (5)0.8619 (3)0.0287 (2)0.096 (1)
C3P0.9587 (9)0.8359 (5)0.0180 (3)0.119 (2)0.68
C3'P0.6746 (18)0.9630 (8)0.0220 (6)0.119 (2)0.32
H1010.90310.28190.29800.066
H1020.36220.70850.18820.056
HC10.44270.27160.15230.049
HC30.93350.43010.19550.051
H1C40.74660.50010.09210.050
H2C40.73570.58650.15360.050
HC50.43770.54540.05200.047
HC70.26660.51810.23540.053
H1C80.25200.36570.19530.058
H2C80.45350.35800.26860.058
H1C90.27590.39510.06360.054
H2C90.47950.37060.05090.054
H1C100.74990.30610.09090.072
H2C100.92540.26430.16600.072
H3C100.71880.20500.13600.072
H1C110.09790.49580.08940.066
H2C110.08200.60350.13010.066
H3C110.13540.60180.05140.066
H1C121.00070.52420.29290.0690.75
H2C120.87940.43940.32150.0690.75
H1'C120.88860.56790.27520.0690.25
H2'C120.99630.46350.31470.0690.25
H1C130.72370.62890.25650.0670.75
H2C130.81850.60790.34910.0670.75
H1C13'0.81140.51420.38310.0670.25
H2C13'0.70850.41410.33420.0670.25
H1C140.57270.48970.33910.0710.75
H2C140.49210.60470.31660.0710.75
H1'C140.49200.54560.34150.0710.25
H2'C140.57850.61500.28800.0710.25
H101P0.49800.73440.10380.074
H1C2P0.77700.93450.04470.0960.68
H2C2P0.66490.8527−0.02210.0960.68
H1'C2P0.72360.8267−0.02240.0960.32
H2'C2P0.91380.87130.04520.0960.32
H1C3P0.97770.8811−0.02220.1190.68
H2C3P1.06750.84560.06790.1190.68
H3C3P0.95540.76380.00110.1190.68
H1C3P'0.70561.0050−0.01720.1190.32
H2C3P'0.53180.95330.00560.1190.32
H3C3P'0.72190.99790.07320.1190.32
U11U22U33U12U13U23
O10.052 (1)0.071 (1)0.071 (1)−0.0012 (9)0.0151 (9)0.0241 (9)
O20.060 (1)0.046 (1)0.068 (1)−0.0018 (8)0.0298 (8)−0.0045 (8)
C10.049 (1)0.041 (1)0.059 (1)−0.008 (1)0.021 (1)−0.002 (1)
C20.050 (1)0.045 (1)0.057 (1)−0.001 (1)0.022 (1)0.003 (1)
C30.046 (1)0.048 (1)0.061 (2)−0.002 (1)0.020 (1)0.000 (1)
C40.051 (1)0.047 (1)0.060 (2)−0.002 (1)0.028 (1)0.000 (1)
C50.051 (1)0.049 (1)0.044 (1)−0.003 (1)0.019 (1)0.001 (1)
C60.047 (1)0.043 (1)0.054 (1)−0.003 (1)0.020 (1)−0.002 (1)
C70.053 (2)0.058 (1)0.056 (1)0.003 (1)0.030 (1)0.005 (1)
C80.054 (2)0.057 (2)0.070 (2)−0.002 (1)0.031 (1)0.007 (1)
C90.054 (2)0.052 (1)0.053 (2)−0.003 (1)0.016 (1)−0.005 (1)
C100.067 (2)0.058 (2)0.099 (2)0.005 (1)0.039 (2)−0.010 (2)
C110.047 (2)0.070 (2)0.074 (2)0.002 (1)0.014 (1)0.004 (1)
C120.059 (2)0.067 (2)0.068 (2)0.000 (1)0.003 (1)−0.008 (1)
C130.069 (2)0.068 (2)0.055 (2)−0.005 (2)0.008 (2)−0.015 (2)
C13'0.069 (2)0.068 (2)0.055 (2)−0.005 (2)0.008 (2)−0.015 (2)
C140.087 (2)0.077 (2)0.049 (2)0.002 (2)0.025 (1)−0.008 (1)
O1P0.068 (1)0.083 (1)0.066 (1)−0.010 (1)0.0154 (9)0.008 (1)
O2P0.067 (1)0.087 (1)0.074 (1)−0.013 (1)0.008 (1)0.011 (1)
C1P0.073 (2)0.058 (2)0.067 (2)−0.012 (2)0.022 (2)−0.002 (1)
C2P0.105 (3)0.099 (3)0.084 (2)−0.020 (2)0.031 (2)0.017 (2)
C3P0.136 (5)0.143 (5)0.083 (3)−0.002 (4)0.046 (3)0.024 (3)
C3'P0.136 (5)0.143 (5)0.083 (3)−0.002 (4)0.046 (3)0.024 (3)
O1—C21.448 (3)C11—H2C111.000
O1—H1011.000C11—H3C111.000
O2—C61.453 (3)C12—C131.512 (4)
O2—H1021.000C12—C13'1.516 (5)
C1—C21.535 (3)C12—H1C121.000
C1—C81.527 (3)C12—H2C121.000
C1—C91.527 (3)C12—H1'C121.000
C1—HC11.000C12—H2'C121.000
C2—C31.555 (3)C13—C141.531 (4)
C2—C101.528 (3)C13—H1C131.000
C3—C41.555 (3)C13—H2C131.000
C3—C121.532 (3)C13'—C141.525 (5)
C3—HC31.000C13'—H1C13'1.000
C4—C51.532 (3)C13'—H2C13'1.000
C4—H1C41.000C14—H1C141.000
C4—H2C41.000C14—H2C141.000
C5—C61.529 (3)O1P—C1P1.319 (3)
C5—C91.524 (3)O1P—H101P1.000
C5—HC51.000O2P—C1P1.199 (3)
C6—C71.556 (3)C1P—C2P1.506 (4)
C6—C111.528 (3)C2P—C3P1.507 (6)
C7—C81.547 (3)C2P—C3'P1.499 (8)
C7—C141.545 (4)C2P—H1C2P1.000
C7—HC71.000C2P—H2C2P1.000
C8—H1C81.000C2P—H1'C2P1.000
C8—H2C81.000C2P—H2'C2P1.000
C9—H1C91.000C3P—H1C3P1.000
C9—H2C91.000C3P—H2C3P1.000
C10—H1C101.000C3P—H3C3P1.000
C10—H2C101.000C3'P—H1C3P'1.000
C10—H3C101.000C3'P—H2C3P'1.000
C11—H1C111.000C3'P—H3C3P'1.000
C2—O1—H101115.1C6—C11—H1C11109.5
C6—O2—H102116.1C6—C11—H2C11109.5
C2—C1—C8117.3 (2)C6—C11—H3C11109.5
C2—C1—C9110.2 (2)H1C11—C11—H2C11109.5
C2—C1—HC1106.9H1C11—C11—H3C11109.5
C8—C1—C9108.1 (2)H2C11—C11—H3C11109.5
C8—C1—HC1106.9C3—C12—C13119.4 (2)
C9—C1—HC1106.9C3—C12—C13'119.4 (4)
O1—C2—C1105.7 (2)C3—C12—H1C12106.9
O1—C2—C3111.7 (2)C3—C12—H2C12106.9
O1—C2—C10106.9 (2)C3—C12—H1'C12106.9
C1—C2—C3113.8 (2)C3—C12—H2'C12106.9
C1—C2—C10109.8 (2)C13—C12—H1C12106.9
C3—C2—C10108.8 (2)C13—C12—H2C12106.9
C2—C3—C4111.7 (2)C13'—C12—H1'C12106.9
C2—C3—C12117.2 (2)C13'—C12—H2'C12106.9
C2—C3—HC3103.9H1C12—C12—H2C12109.5
C4—C3—C12114.2 (2)H1'C12—C12—H2'C12109.5
C4—C3—HC3103.9C12—C13—C14116.4 (3)
C12—C3—HC3103.9C12—C13—H1C13107.7
C3—C4—C5118.3 (2)C12—C13—H2C13107.7
C3—C4—H1C4107.2C14—C13—H1C13107.7
C3—C4—H2C4107.2C14—C13—H2C13107.7
C5—C4—H1C4107.2H1C13—C13—H2C13109.5
C5—C4—H2C4107.2C12—C13'—C14116.5 (4)
H1C4—C4—H2C4109.5C12—C13'—H1C13'107.7
C4—C5—C6118.4 (2)C12—C13'—H2C13'107.7
C4—C5—C9108.3 (2)C14—C13'—H1C13'107.7
C4—C5—HC5106.5C14—C13'—H2C13'107.7
C6—C5—C9110.0 (2)H1C13'—C13'—H2C13'109.5
C6—C5—HC5106.5C7—C14—C13121.3 (2)
C9—C5—HC5106.5C7—C14—C13'118.6 (4)
O2—C6—C5106.6 (2)C7—C14—H1C14106.4
O2—C6—C7111.3 (2)C7—C14—H2C14106.4
O2—C6—C11106.0 (2)C13—C14—H1C14106.4
C5—C6—C7113.3 (2)C13—C14—H2C14106.4
C5—C6—C11110.5 (2)H1C14—C14—H2C14109.5
C7—C6—C11109.0 (2)C1P—O1P—H101P116.7
C6—C7—C8111.5 (2)O1P—C1P—O2P122.8 (3)
C6—C7—C14116.5 (2)O1P—C1P—C2P113.2 (3)
C6—C7—HC7104.2O2P—C1P—C2P124.0 (3)
C8—C7—C14114.6 (2)C1P—C2P—C3P115.4 (3)
C8—C7—HC7104.2C1P—C2P—C3'P108.8 (5)
C14—C7—HC7104.2C1P—C2P—H1C2P108.0
C1—C8—C7118.9 (2)C1P—C2P—H2C2P108.0
C1—C8—H1C8107.1C1P—C2P—H1'C2P109.6
C1—C8—H2C8107.1C1P—C2P—H2'C2P109.6
C7—C8—H1C8107.1H1C2P—C2P—H2C2P109.5
C7—C8—H2C8107.1H1'C2P—C2P—H2'C2P109.5
H1C8—C8—H2C8109.5C2P—C3P—H1C3P109.5
C1—C9—C5108.2 (2)C2P—C3P—H2C3P109.5
C1—C9—H1C9109.8C2P—C3P—H3C3P109.5
C1—C9—H2C9109.8H1C3P—C3P—H2C3P109.5
C5—C9—H1C9109.8H1C3P—C3P—H3C3P109.5
C5—C9—H2C9109.8H2C3P—C3P—H3C3P109.5
H1C9—C9—H2C9109.5C2P—C3'P—H1C3P'109.5
C2—C10—H1C10109.5C2P—C3'P—H2C3P'109.5
C2—C10—H2C10109.5C2P—C3'P—H3C3P'109.5
C2—C10—H3C10109.5H1C3P'—C3'P—H2C3P'109.5
H1C10—C10—H2C10109.5H1C3P'—C3'P—H3C3P'109.5
H1C10—C10—H3C10109.5H2C3P'—C3'P—H3C3P'109.5
H2C10—C10—H3C10109.5
D—H···AD—HH···AD···AD—H···A
O1—H101···O2Pi1.001.822.822 (3)180
O2—H102···O1ii1.001.752.746 (3)180
O1P—H101P···O21.001.642.635 (3)180
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H101⋯O2Pi1.001.822.822 (3)180
O2—H102⋯O1ii1.001.752.746 (3)180
O1P—H101P⋯O21.001.642.635 (3)180

Symmetry codes: (i) ; (ii) .

  1 in total

1.  Helical tubuland diols: a synthetic and crystal engineering quest.

Authors:  Roger Bishop
Journal:  Acc Chem Res       Date:  2009-01-20       Impact factor: 22.384

  1 in total

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