Literature DB >> 21583089

1,2-Diiodo-4,5-dimethyl-benzene.

Bruce A Hathaway1, Uriah J Kilgore, Marcus R Bond.   

Abstract

The structure of the title compound, C(8)H(8)I(2), conforms closely to the mm2 symmetry expected for the free mol-ecule and is the first reported structure of a diiodo-dimethyl-benzene. Repulsion by neighboring I atoms and the neighboring methyl groups opposite to them results in a slight elongation of the mol-ecule along the approximate twofold rotation axis that bis-ects the ring between the two I atoms. In the extended structure, the mol-ecules form inversion-related pairs which are organized in approximately hexa-gonal close-packed layers and the layers then stacked so that mol-ecules in neighboring layers abut head-to-tail in a manner that optimizes dipole-dipole inter-actions.

Entities:  

Year:  2009        PMID: 21583089      PMCID: PMC2969782          DOI: 10.1107/S1600536809016018

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis see: Suzuki (1988 ▶). For the structure of 1,2-diiodo-4,5-dimethoxy­benzene, see: Cukiernik et al. (2008 ▶). For methods of iodinating substituted benzenes, see: Hathaway et al. (2007 ▶). For related work on diacetyl­enes, see: Hathaway (1988 ▶); Hathaway & Scates (1997 ▶).

Experimental

Crystal data

C8H8I2 M = 357.94 Monoclinic, a = 9.4458 (1) Å b = 8.1334 (1) Å c = 13.4562 (2) Å β = 110.109 (1)° V = 970.77 (2) Å3 Z = 4 Mo Kα radiation μ = 6.41 mm−1 T = 298 K 0.3 × 0.2 × 0.18 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SORTAV; Blessing, 1995 ▶) T min = 0.184, T max = 0.316 32763 measured reflections 4243 independent reflections 2520 reflections with I > 2σ(I) R int = 0.057

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.090 S = 1.10 4243 reflections 94 parameters H-atom parameters constrained Δρmax = 0.90 e Å−3 Δρmin = −0.75 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: SCALEPACK and DENZO (Otwinowski & Minor, 1997 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809016018/is2407sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016018/is2407Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H8I2F(000) = 648
Mr = 357.94Dx = 2.449 Mg m3
Monoclinic, P21/nMelting point = 365–363 K
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 9.4458 (1) ÅCell parameters from 4493 reflections
b = 8.1334 (1) Åθ = 2.9–35.0°
c = 13.4562 (2) ŵ = 6.41 mm1
β = 110.109 (1)°T = 298 K
V = 970.77 (2) Å3Prism, colorless
Z = 40.3 × 0.2 × 0.18 mm
Nonius KappaCCD diffractometer2520 reflections with I > 2σ(I)
φ and ω scansRint = 0.057
Absorption correction: multi-scan (SORTAV; Blessing, 1995)θmax = 35.1°, θmin = 3.0°
Tmin = 0.184, Tmax = 0.316h = −15→15
32763 measured reflectionsk = −13→13
4243 independent reflectionsl = −21→21
Refinement on F2H-atom parameters constrained
Least-squares matrix: fullw = 1/[σ2(Fo2) + (0.0253P)2 + 1.2156P] where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.035(Δ/σ)max = 0.002
wR(F2) = 0.090Δρmax = 0.90 e Å3
S = 1.10Δρmin = −0.75 e Å3
4243 reflectionsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
94 parametersExtinction coefficient: 0.0069 (6)
0 restraints
Experimental. 13 C-NMR (CDCl3, 75.5 MHz): δ 140.0, 138.6, 104.0, 19.1. IR (thin film on a KBr disk) cm-1: 2976, 2938, 1720, 1438, 1370, 1329, 1264, 1153, 1018, 864.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.Mean plane calculation for molecule: m1 = -0.09103(0.00034) m2 = 0.84014(0.00006) m3 = -0.53468(0.00010) D = 1.69893(0.00184) Atom d s d/s (d/s)**2 I1 * -0.0006 0.0003 - 1.888 3.565 I2 * 0.0008 0.0003 2.741 7.511 C1 * -0.0032 0.0034 - 0.919 0.844 C2 * -0.0310 0.0033 - 9.414 88.619 C3 * -0.0569 0.0035 - 16.075 258.411 C4 * -0.0270 0.0036 - 7.562 57.183 C5 * 0.0431 0.0036 11.962 143.098 C6 * 0.0336 0.0037 9.187 84.400 C41 * -0.0843 0.0048 - 17.682 312.643 C51 * 0.1187 0.0049 24.074 579.539 ============ Sum((d/s)**2) for starred atoms 1535.813 Chi-squared at 95% for 7 degrees of freedom: 14.10 The group of atoms deviates significantly from planarity
xyzUiso*/Ueq
I10.60697 (3)0.54314 (4)0.23538 (2)0.06585 (12)
I20.74073 (3)0.78802 (4)0.48114 (2)0.06329 (11)
C10.4696 (4)0.6067 (4)0.3230 (3)0.0443 (7)
C20.5208 (4)0.6956 (4)0.4163 (3)0.0432 (7)
C30.4222 (4)0.7288 (4)0.4696 (3)0.0472 (7)
H30.45730.78640.53310.057*
C40.2729 (4)0.6790 (4)0.4315 (3)0.0465 (7)
C50.2204 (4)0.5941 (4)0.3360 (3)0.0478 (7)
C60.3202 (4)0.5567 (5)0.2835 (3)0.0484 (8)
H60.28610.4970.22080.058*
C410.1722 (5)0.7162 (6)0.4942 (4)0.0655 (11)
H41A0.09320.78930.45460.098*
H41B0.23020.76710.560.098*
H41C0.12890.61580.50820.098*
C510.0575 (5)0.5410 (6)0.2889 (4)0.0686 (11)
H51A0.03130.4760.33950.103*
H51B0.04380.4770.22630.103*
H51C−0.00610.63640.27080.103*
U11U22U33U12U13U23
I10.06034 (17)0.0866 (2)0.05987 (17)0.00565 (14)0.03258 (13)−0.00308 (14)
I20.04658 (14)0.06653 (19)0.06980 (19)−0.01353 (11)0.01107 (11)−0.00086 (13)
C10.0471 (16)0.0459 (17)0.0444 (16)−0.0011 (14)0.0215 (13)0.0011 (13)
C20.0424 (15)0.0438 (17)0.0406 (15)−0.0035 (13)0.0106 (12)0.0038 (13)
C30.0541 (18)0.0462 (18)0.0394 (15)−0.0009 (15)0.0137 (13)−0.0036 (14)
C40.0478 (17)0.0467 (18)0.0489 (17)0.0030 (14)0.0217 (14)0.0042 (14)
C50.0437 (16)0.0456 (18)0.0529 (18)−0.0012 (14)0.0152 (14)0.0045 (14)
C60.0485 (18)0.0529 (19)0.0411 (16)−0.0062 (15)0.0119 (13)−0.0046 (14)
C410.068 (3)0.075 (3)0.067 (2)0.005 (2)0.041 (2)0.000 (2)
C510.046 (2)0.073 (3)0.083 (3)−0.007 (2)0.0168 (19)−0.006 (2)
I1—C12.097 (3)C41—H41B0.96
I2—C22.097 (3)C41—H41C0.96
C1—C21.384 (5)C4—C51.391 (5)
C1—C61.386 (5)C5—C511.512 (5)
C2—C31.384 (5)C51—H51A0.96
C3—C41.385 (5)C51—H51B0.96
C3—H30.93C51—H51C0.96
C4—C411.504 (5)C5—C61.392 (5)
C41—H41A0.96C6—H60.93
I1···I2i4.1737 (3)I1···I2ii4.2126 (4)
C2—C1—C6119.6 (3)H41A—C41—H41C109.5
C2—C1—I1123.2 (2)H41B—C41—H41C109.5
C6—C1—I1117.2 (2)C5—C4—C41121.7 (4)
C1—C2—C3119.0 (3)C4—C5—C6119.2 (3)
C1—C2—I2123.5 (2)C4—C5—C51121.2 (4)
C3—C2—I2117.5 (2)C5—C51—H51A109.5
C2—C3—C4122.1 (3)C5—C51—H51B109.5
C2—C3—H3118.9H51A—C51—H51B109.5
C4—C3—H3118.9C5—C51—H51C109.5
C3—C4—C5118.8 (3)H51A—C51—H51C109.5
C3—C4—C41119.5 (3)H51B—C51—H51C109.5
C4—C41—H41A109.5C6—C5—C51119.6 (4)
C4—C41—H41B109.5C1—C6—C5121.3 (3)
H41A—C41—H41B109.5C1—C6—H6119.4
C4—C41—H41C109.5C5—C6—H6119.4
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

3.  Halogen bonding in 1,2-dibromo-4,5-dimethoxybenzene and 1,2-diiodo-4,5-dimethoxybenzene.

Authors:  Fabio D Cukiernik; Andrés Zelcer; Maria Teresa Garland; Ricardo Baggio
Journal:  Acta Crystallogr C       Date:  2008-10-22       Impact factor: 1.172

  3 in total
  1 in total

1.  4,4'-(4,5-dimethyl-1,2-phenylene)bis(2-methylbut-3-yn-2-ol): structural variation in vicinal dialkynols.

Authors:  Marcus R Bond; Bruce A Hathaway; Uriah J Kilgore
Journal:  Acta Crystallogr C       Date:  2012-03-31       Impact factor: 1.172

  1 in total

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