Literature DB >> 21583087

2-Acetyl-pyridinium bromanilate.

Lynne H Thomas, Bryan Boyle, Lesley A Clive, Anna Collins, Lynsey D Currie, Malgorzata Gogol, Claire Hastings, Andrew O F Jones, Jennifer L Kennedy, Graham B Kerr, Alastair Kidd, Lorreta M Lawton, Susan J Macintyre, Niall M Maclean, Alan R G Martin, Kate McGonagle, Samantha Melrose, Gaius A Rew, Colin W Robinson, Marc Schmidtmann, Felicity B Turnbull, Lewis G Williams, Alan Y Wiseman, Malgorzata H Wocial, Chick C Wilson.   

Abstract

In the crystal of the title mol-ecular salt (systematic name: 2-acetyl-pyridinium 2,5-dibromo-4-hydr-oxy-3,6-dioxocyclo-hexa-1,4-dienolate), C(7)H(8)NO(+)·C(6)HBr(2)O(4) (-), centrosymmetric rings consisting of two cations and two anions are formed, with the components linked by alternating O-H⋯O and N-H⋯O hydrogen bonds. Short O⋯Br contacts [3.243 (2) and 3.359 (2) Å] may help to consolidate the packing.

Entities:  

Year:  2009        PMID: 21583087      PMCID: PMC2969770          DOI: 10.1107/S1600536809016456

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of bromanilic acid, see: Robl (1987 ▶). For related structures, see: Tomura & Yamashita (2000 ▶); Zaman et al. (2001 ▶, 2004 ▶); Horiuchi et al. (2005 ▶).

Experimental

Crystal data

C7H8NOC6HBr2O4 M = 419.03 Monoclinic, a = 9.1323 (5) Å b = 13.3821 (7) Å c = 12.2287 (7) Å β = 112.396 (2)° V = 1381.74 (13) Å3 Z = 4 Mo Kα radiation μ = 5.89 mm−1 T = 100 K 0.25 × 0.2 × 0.1 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: empirical (using intensity measurements) (CrystalClear; Rigaku/MSC, 2008 ▶) T min = 0.561, T max = 1.000 (expected range = 0.311–0.555) 17193 measured reflections 3156 independent reflections 2793 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.022 wR(F 2) = 0.050 S = 1.04 3156 reflections 219 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.43 e Å−3 Δρmin = −0.31 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2008 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809016456/hb2948sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016456/hb2948Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H8NO+·C6HBr2O4F(000) = 816
Mr = 419.03Dx = 2.014 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 13698 reflections
a = 9.1323 (5) Åθ = 6.1–55.2°
b = 13.3821 (7) ŵ = 5.89 mm1
c = 12.2287 (7) ÅT = 100 K
β = 112.396 (2)°Block, red
V = 1381.74 (13) Å30.25 × 0.2 × 0.1 mm
Z = 4
Rigaku R-AXIS RAPID IP diffractometer2793 reflections with I > 2σ(I)
graphiteRint = 0.036
ω scansθmax = 27.5°, θmin = 3.0°
Absorption correction: empirical (using intensity measurements) (CrystalClear; Rigaku/MSC, 2008)h = −11→11
Tmin = 0.561, Tmax = 1.000k = −17→17
17193 measured reflectionsl = −15→15
3156 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.022Hydrogen site location: difference Fourier map
wR(F2) = 0.050H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0229P)2 + 0.7894P] where P = (Fo2 + 2Fc2)/3
3156 reflections(Δ/σ)max = 0.001
219 parametersΔρmax = 0.43 e Å3
0 restraintsΔρmin = −0.31 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. The isotropic displacement parameters for the hydrogen atoms involved in hydrogenbonds are refined freely. All other hydrogen atoms are refined against the atoms to which they are bonded.
xyzUiso*/Ueq
H60.611 (3)0.307 (2)0.195 (3)0.041 (8)*
O50.50649 (17)0.44777 (11)0.25644 (13)0.0201 (3)
N10.5396 (2)0.29814 (12)0.11977 (16)0.0152 (3)
C120.4282 (2)0.45501 (15)0.15172 (18)0.0160 (4)
C110.5549 (2)0.22016 (16)0.05849 (19)0.0200 (4)
H50.637 (3)0.1735 (18)0.102 (2)0.024*
C80.3294 (2)0.36207 (16)−0.04572 (18)0.0173 (4)
H20.263 (3)0.4122 (18)−0.076 (2)0.021*
C100.4555 (3)0.20854 (17)−0.0595 (2)0.0223 (5)
H40.468 (3)0.156 (2)−0.099 (2)0.027*
C70.4298 (2)0.37017 (14)0.07151 (17)0.0145 (4)
C90.3417 (3)0.28035 (17)−0.11190 (19)0.0217 (4)
H30.274 (3)0.2759 (19)−0.195 (2)0.026*
C130.3272 (3)0.54328 (17)0.0970 (2)0.0232 (5)
H90.351 (3)0.595 (2)0.152 (2)0.028*
H70.340 (3)0.5618 (19)0.027 (2)0.028*
H80.222 (3)0.5245 (19)0.076 (2)0.028*
H10.663 (4)0.511 (2)0.426 (3)0.050 (10)*
Br10.92699 (2)0.416206 (15)0.738904 (17)0.01764 (6)
Br20.98903 (2)0.811177 (15)0.427719 (17)0.01869 (6)
O11.19471 (16)0.56928 (11)0.79086 (12)0.0180 (3)
O21.22536 (16)0.73058 (10)0.67034 (12)0.0186 (3)
O30.73311 (16)0.64428 (11)0.37219 (12)0.0198 (3)
C50.9790 (2)0.69726 (14)0.51628 (17)0.0150 (4)
O40.70848 (17)0.48853 (11)0.48976 (14)0.0197 (3)
C10.8359 (2)0.54445 (15)0.54043 (18)0.0152 (4)
C60.8462 (2)0.63450 (15)0.46801 (17)0.0149 (4)
C41.1029 (2)0.67882 (14)0.62391 (18)0.0139 (4)
C31.0879 (2)0.58650 (14)0.69581 (17)0.0143 (4)
C20.9474 (2)0.52459 (14)0.64757 (17)0.0145 (4)
U11U22U33U12U13U23
O50.0225 (8)0.0205 (7)0.0161 (7)−0.0024 (6)0.0059 (6)−0.0021 (6)
N10.0126 (8)0.0165 (8)0.0135 (8)0.0001 (6)0.0014 (7)0.0008 (7)
C120.0157 (10)0.0161 (10)0.0184 (10)−0.0023 (7)0.0088 (8)0.0005 (8)
C110.0178 (10)0.0179 (10)0.0219 (11)0.0044 (8)0.0048 (9)0.0002 (8)
C80.0129 (10)0.0206 (10)0.0158 (10)0.0007 (8)0.0024 (8)0.0035 (8)
C100.0277 (12)0.0212 (11)0.0185 (11)0.0005 (9)0.0093 (9)−0.0056 (9)
C70.0138 (9)0.0143 (9)0.0158 (10)−0.0004 (7)0.0062 (8)0.0011 (8)
C90.0242 (11)0.0246 (11)0.0137 (10)−0.0027 (9)0.0045 (9)−0.0002 (8)
C130.0271 (12)0.0209 (11)0.0249 (12)0.0057 (9)0.0135 (10)0.0023 (9)
Br10.01649 (11)0.01824 (11)0.01617 (11)−0.00241 (7)0.00395 (8)0.00493 (7)
Br20.02145 (12)0.01616 (11)0.01540 (11)−0.00364 (7)0.00360 (9)0.00339 (7)
O10.0164 (7)0.0188 (7)0.0144 (7)−0.0007 (5)0.0011 (6)0.0018 (6)
O20.0172 (7)0.0158 (7)0.0185 (7)−0.0026 (5)0.0020 (6)0.0016 (6)
O30.0182 (7)0.0229 (8)0.0137 (7)−0.0020 (6)0.0008 (6)0.0032 (6)
C50.0184 (10)0.0128 (9)0.0129 (9)−0.0001 (7)0.0051 (8)0.0021 (7)
O40.0168 (8)0.0208 (8)0.0154 (7)−0.0058 (6)−0.0008 (6)0.0026 (6)
C10.0155 (10)0.0153 (9)0.0154 (10)−0.0005 (7)0.0065 (8)−0.0014 (8)
C60.0156 (10)0.0165 (10)0.0127 (9)0.0016 (7)0.0057 (8)0.0005 (8)
C40.0147 (10)0.0122 (9)0.0152 (10)0.0003 (7)0.0061 (8)−0.0013 (7)
C30.0164 (10)0.0136 (9)0.0145 (10)0.0013 (7)0.0077 (8)−0.0015 (7)
C20.0167 (10)0.0130 (9)0.0151 (9)−0.0001 (7)0.0075 (8)0.0012 (7)
O5—C121.209 (2)C13—H70.94 (3)
N1—C111.323 (3)C13—H80.93 (3)
N1—C71.353 (2)Br1—C21.8826 (19)
N1—H60.91 (3)Br2—C51.8922 (19)
C12—C131.491 (3)O1—C31.221 (2)
C12—C71.504 (3)O2—C41.253 (2)
C11—C101.390 (3)O3—C61.239 (2)
C11—H50.96 (3)C5—C41.392 (3)
C8—C71.381 (3)C5—C61.407 (3)
C8—C91.390 (3)O4—C11.322 (2)
C8—H20.89 (2)O4—H10.79 (3)
C10—C91.381 (3)C1—C21.344 (3)
C10—H40.88 (3)C1—C61.520 (3)
C9—H30.97 (3)C4—C31.552 (3)
C13—H90.93 (3)C3—C21.451 (3)
C11—N1—C7122.38 (18)H9—C13—H7112 (2)
C11—N1—H6119.2 (18)C12—C13—H8107.8 (16)
C7—N1—H6118.2 (18)H9—C13—H8110 (2)
O5—C12—C13123.61 (19)H7—C13—H8107 (2)
O5—C12—C7118.77 (18)C4—C5—C6123.42 (18)
C13—C12—C7117.62 (18)C4—C5—Br2119.00 (14)
N1—C11—C10120.53 (19)C6—C5—Br2117.57 (14)
N1—C11—H5115.3 (15)C1—O4—H1107 (2)
C10—C11—H5124.2 (15)O4—C1—C2123.31 (19)
C7—C8—C9119.83 (19)O4—C1—C6114.51 (17)
C7—C8—H2117.2 (16)C2—C1—C6122.18 (17)
C9—C8—H2122.9 (16)O3—C6—C5127.49 (19)
C9—C10—C11118.8 (2)O3—C6—C1114.86 (17)
C9—C10—H4122.0 (16)C5—C6—C1117.65 (17)
C11—C10—H4119.1 (16)O2—C4—C5126.44 (18)
N1—C7—C8119.03 (18)O2—C4—C3116.07 (17)
N1—C7—C12116.30 (17)C5—C4—C3117.48 (17)
C8—C7—C12124.67 (18)O1—C3—C2122.78 (18)
C10—C9—C8119.39 (19)O1—C3—C4118.58 (17)
C10—C9—H3120.6 (15)C2—C3—C4118.64 (17)
C8—C9—H3119.9 (15)C1—C2—C3120.51 (18)
C12—C13—H9109.4 (16)C1—C2—Br1121.41 (15)
C12—C13—H7110.4 (16)C3—C2—Br1118.08 (14)
D—H···AD—HH···AD···AD—H···A
O4—H1···O50.78 (3)2.20 (3)2.798 (2)134 (3)
N1—H6···O2i0.91 (3)1.83 (3)2.673 (2)154 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H1⋯O50.78 (3)2.20 (3)2.798 (2)134 (3)
N1—H6⋯O2i0.91 (3)1.83 (3)2.673 (2)154 (3)

Symmetry code: (i) .

  3 in total

1.  Room-temperature ferroelectricity and gigantic dielectric susceptibility on a supramolecular architecture of phenazine and deuterated chloranilic acid.

Authors:  Sachio Horiuchi; Reiji Kumai; Yoshinori Tokura
Journal:  J Am Chem Soc       Date:  2005-04-13       Impact factor: 15.419

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Crystal engineering using anilic acids and dipyridyl compounds through a new supramolecular synthon.

Authors:  M B Zaman; M Tomura; Y Yamashita
Journal:  J Org Chem       Date:  2001-09-07       Impact factor: 4.354

  3 in total
  1 in total

1.  1,1',2,2',3,3',4,4'-Octa-methyl-ferro-cenium 2,5-dibromo-4-hy-droxy-3,6-dioxocyclo-hexa-1,4-dien-1-olate.

Authors:  Tomoyuki Mochida
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-02
  1 in total

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