Literature DB >> 21583086

2,6-Bis(trifluoro-meth-yl)benzoic acid.

John M Tobin1, Jason D Masuda.   

Abstract

The title compound, C(9)H(4)F(6)O(2), contains two mol-ecules in the asymmetric unit, one of which exhibits disorder in both of its trifluoro-methyl groups. The dihedral angles between the benzene ring and the carboxyl group are 71.5 (2) and 99.3 (2)° in the two independent mol-ecules. The compound exhibits a catemeric structure resulting from inter-molecular O-H⋯O hydrogen bonding between the carboxyl groups.

Entities:  

Year:  2009        PMID: 21583086      PMCID: PMC2969748          DOI: 10.1107/S1600536809016468

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

There is only one example in the literature of a crystallographically characterized benzoic acid with trifluoro­methyl groups in the ortho position, namely 2-trifluoro­methyl-3-pyrrole benzoic acid (see Faigl et al., 1999 ▶). For a recent example of crystal engineering to promote the formation of dimeric or catemeric structures in benzoic acids, see: Moorthy et al. (2002 ▶). For synthesis details, see: Dmowski & Piasecka-Macieiewska (1998 ▶).

Experimental

Crystal data

C9H4F6O2 M = 258.12 Monoclinic, a = 10.873 (2) Å b = 15.755 (3) Å c = 11.561 (2) Å β = 94.961 (2)° V = 1973.0 (6) Å3 Z = 8 Mo Kα radiation μ = 0.20 mm−1 T = 296 K 0.39 × 0.31 × 0.26 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.834, T max = 0.951 12904 measured reflections 3438 independent reflections 2889 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.112 S = 1.02 3438 reflections 331 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809016468/bi2369sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809016468/bi2369Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H4F6O2F(000) = 1024
Mr = 258.12Dx = 1.738 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6970 reflections
a = 10.873 (2) Åθ = 2.3–28.0°
b = 15.755 (3) ŵ = 0.20 mm1
c = 11.561 (2) ÅT = 296 K
β = 94.961 (2)°Block, colorless
V = 1973.0 (6) Å30.39 × 0.31 × 0.26 mm
Z = 8
Bruker APEXII CCD diffractometer3438 independent reflections
Radiation source: fine-focus sealed tube2889 reflections with I > 2σ(I)
graphiteRint = 0.021
φ and ω scansθmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −12→12
Tmin = 0.834, Tmax = 0.951k = −18→18
12904 measured reflectionsl = −13→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.112H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.058P)2 + 0.5224P] where P = (Fo2 + 2Fc2)/3
3438 reflections(Δ/σ)max < 0.001
331 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
C10.25273 (16)0.14562 (11)0.00186 (14)0.0532 (4)
C20.34011 (15)0.08652 (10)0.07069 (14)0.0490 (4)
C30.43893 (16)0.11687 (12)0.14433 (16)0.0564 (4)
C40.51596 (17)0.06028 (14)0.20807 (17)0.0666 (5)
H4A0.58070.08080.25810.080*
C50.49740 (19)−0.02557 (14)0.19783 (18)0.0689 (5)
H5A0.5498−0.06290.24050.083*
C60.40178 (18)−0.05640 (12)0.12489 (16)0.0614 (5)
H6A0.3900−0.11470.11750.074*
C70.32257 (15)−0.00131 (10)0.06209 (14)0.0508 (4)
C80.46743 (19)0.20978 (14)0.1562 (2)0.0756 (6)
F10.5244 (2)0.22865 (11)0.25885 (18)0.1361 (7)
F20.53907 (15)0.23619 (9)0.07602 (19)0.1232 (7)
F30.36850 (12)0.25931 (8)0.14440 (14)0.0893 (4)
C90.21830 (18)−0.03876 (12)−0.01534 (17)0.0632 (5)
F40.11518 (12)−0.04286 (10)0.03733 (13)0.0975 (4)
F50.19338 (14)0.00483 (8)−0.11254 (11)0.0911 (4)
F60.24344 (13)−0.11707 (8)−0.04877 (12)0.0906 (4)
C100.10257 (17)0.15284 (11)0.30263 (15)0.0545 (4)
C110.07034 (16)0.13002 (10)0.42282 (14)0.0514 (4)
C12−0.04150 (17)0.15569 (11)0.46310 (15)0.0561 (4)
C13−0.0643 (2)0.14110 (13)0.57757 (18)0.0711 (5)
H13A−0.13800.15930.60450.085*
C140.0220 (2)0.09977 (15)0.65140 (18)0.0801 (6)
H14A0.00660.09060.72830.096*
C150.1301 (2)0.07212 (14)0.61252 (17)0.0730 (6)
H15A0.18690.04300.66260.088*
C160.15558 (18)0.08709 (12)0.49899 (16)0.0603 (5)
O10.14736 (11)0.15753 (8)0.02411 (10)0.0606 (3)
O20.30404 (14)0.18036 (9)−0.08444 (12)0.0751 (4)
H2A0.25490.2129−0.11920.113*
O30.05615 (13)0.10397 (9)0.22093 (11)0.0684 (4)
H3A0.08180.11820.15920.103*
O40.16936 (19)0.21110 (11)0.28586 (13)0.0999 (6)
C17−0.13950 (10)0.19782 (8)0.38373 (10)0.0726 (5)
F7A−0.09321 (12)0.25255 (8)0.31618 (10)0.1010 (13)0.569 (5)
F8A−0.19164 (10)0.13805 (10)0.31178 (10)0.0901 (11)0.569 (5)
F9A−0.22489 (10)0.23045 (8)0.43893 (12)0.139 (2)0.569 (5)
F7B−0.17175 (10)0.16347 (9)0.28614 (11)0.144 (3)0.431 (5)
F9B−0.10986 (11)0.28028 (10)0.35381 (9)0.1164 (19)0.431 (5)
F8B−0.24254 (11)0.21614 (8)0.43317 (12)0.0970 (19)0.431 (5)
C180.27540 (10)0.05569 (8)0.46034 (11)0.0751 (6)
F10A0.26369 (10)0.01894 (8)0.35789 (13)0.0877 (11)0.689 (5)
F11A0.36230 (10)0.11205 (10)0.46284 (11)0.1163 (14)0.689 (5)
F12A0.32020 (9)−0.01015 (9)0.52898 (13)0.1142 (11)0.689 (5)
F10B0.33236 (9)0.12165 (10)0.40107 (11)0.108 (2)0.311 (5)
F12B0.35672 (10)0.03614 (8)0.54011 (13)0.125 (3)0.311 (5)
F11B0.26173 (10)0.00490 (9)0.37781 (12)0.154 (5)0.311 (5)
U11U22U33U12U13U23
C10.0618 (10)0.0542 (9)0.0442 (9)0.0104 (7)0.0085 (7)0.0040 (7)
C20.0497 (8)0.0552 (9)0.0428 (8)0.0073 (7)0.0077 (7)0.0041 (7)
C30.0508 (9)0.0623 (10)0.0566 (10)0.0011 (8)0.0089 (8)−0.0018 (8)
C40.0507 (10)0.0864 (14)0.0607 (11)0.0064 (9)−0.0062 (8)−0.0020 (10)
C50.0631 (11)0.0776 (13)0.0641 (12)0.0199 (10)−0.0061 (9)0.0105 (10)
C60.0689 (11)0.0567 (10)0.0582 (11)0.0113 (8)0.0025 (9)0.0077 (8)
C70.0535 (9)0.0551 (9)0.0436 (9)0.0056 (7)0.0044 (7)0.0031 (7)
C80.0608 (11)0.0702 (12)0.0965 (16)−0.0044 (10)0.0112 (11)−0.0113 (11)
F10.1536 (16)0.0987 (11)0.1447 (15)−0.0163 (10)−0.0518 (13)−0.0361 (10)
F20.1085 (11)0.0773 (9)0.1956 (19)−0.0172 (8)0.0813 (12)−0.0035 (10)
F30.0828 (8)0.0627 (7)0.1245 (12)0.0037 (6)0.0221 (8)−0.0124 (7)
C90.0672 (11)0.0597 (11)0.0615 (11)0.0030 (9)−0.0013 (9)0.0003 (9)
F40.0628 (7)0.1270 (12)0.1024 (10)−0.0164 (7)0.0050 (7)−0.0162 (9)
F50.1201 (11)0.0832 (8)0.0628 (7)−0.0013 (7)−0.0338 (7)0.0035 (6)
F60.1079 (10)0.0632 (7)0.0972 (10)0.0013 (6)−0.0118 (8)−0.0186 (6)
C100.0609 (10)0.0574 (10)0.0454 (9)−0.0107 (8)0.0059 (7)−0.0075 (7)
C110.0640 (10)0.0495 (9)0.0408 (8)−0.0136 (7)0.0046 (7)−0.0079 (7)
C120.0679 (11)0.0526 (9)0.0486 (9)−0.0112 (8)0.0089 (8)−0.0117 (7)
C130.0839 (13)0.0731 (12)0.0591 (12)−0.0128 (10)0.0231 (10)−0.0126 (10)
C140.1122 (18)0.0860 (15)0.0440 (10)−0.0135 (13)0.0171 (11)0.0010 (10)
C150.0927 (15)0.0781 (13)0.0473 (10)−0.0043 (11)0.0009 (10)0.0031 (9)
C160.0698 (11)0.0606 (10)0.0499 (10)−0.0094 (9)0.0017 (8)−0.0042 (8)
O10.0575 (7)0.0753 (8)0.0490 (7)0.0156 (6)0.0041 (5)0.0077 (6)
O20.0858 (9)0.0756 (9)0.0677 (8)0.0301 (7)0.0294 (7)0.0303 (7)
O30.0850 (9)0.0783 (9)0.0420 (6)−0.0259 (7)0.0064 (6)−0.0103 (6)
O40.1505 (15)0.0963 (11)0.0575 (9)−0.0706 (11)0.0357 (9)−0.0223 (8)
C170.0723 (13)0.0783 (14)0.0675 (13)0.0023 (11)0.0087 (10)−0.0092 (11)
F7A0.115 (2)0.088 (2)0.099 (2)0.0095 (16)0.0008 (17)0.0347 (18)
F8A0.0718 (17)0.0977 (19)0.095 (2)−0.0026 (14)−0.0251 (14)−0.0169 (16)
F9A0.153 (4)0.144 (3)0.121 (4)0.087 (3)0.022 (3)−0.030 (3)
F7B0.156 (5)0.187 (5)0.079 (3)0.090 (4)−0.040 (3)−0.064 (3)
F9B0.100 (3)0.097 (3)0.151 (4)0.009 (2)0.005 (3)0.039 (3)
F8B0.055 (2)0.146 (4)0.092 (4)0.006 (3)0.018 (2)0.007 (3)
C180.0736 (13)0.0807 (15)0.0699 (14)−0.0014 (11)0.0001 (11)−0.0030 (11)
F10A0.082 (2)0.116 (2)0.0655 (15)0.0210 (16)0.0119 (13)−0.0152 (16)
F11A0.0730 (14)0.115 (2)0.161 (3)−0.0229 (14)0.0114 (17)−0.033 (2)
F12A0.1041 (18)0.130 (2)0.107 (2)0.0381 (17)−0.0002 (15)0.0232 (16)
F10B0.076 (3)0.109 (4)0.146 (6)0.006 (3)0.039 (3)0.029 (4)
F12B0.084 (3)0.204 (9)0.081 (4)0.039 (5)−0.020 (3)0.023 (4)
F11B0.099 (7)0.145 (7)0.222 (11)−0.022 (5)0.038 (6)−0.109 (7)
C1—O11.210 (2)C11—C121.399 (3)
C1—O21.305 (2)C12—C131.387 (3)
C1—C21.507 (2)C12—C171.500 (2)
C2—C31.396 (2)C13—C141.376 (3)
C2—C71.399 (2)C13—H13A0.930
C3—C41.390 (3)C14—C151.365 (3)
C3—C81.500 (3)C14—H14A0.930
C4—C51.371 (3)C15—C161.385 (3)
C4—H4A0.930C15—H15A0.930
C5—C61.370 (3)C16—C181.498 (2)
C5—H5A0.930O2—H2A0.820
C6—C71.383 (2)O3—H3A0.820
C6—H6A0.930C17—F7B1.2729 (11)
C7—C91.503 (3)C17—F9A1.2791 (11)
C8—F11.324 (3)C17—F7A1.2941 (11)
C8—F31.326 (3)C17—F8B1.3326 (12)
C8—F21.328 (3)C17—F8A1.3485 (12)
C9—F41.323 (2)C17—F9B1.3895 (12)
C9—F51.325 (2)C18—F11B1.2443 (10)
C9—F61.328 (2)C18—F12B1.2593 (11)
C10—O41.197 (2)C18—F11A1.2952 (11)
C10—O31.287 (2)C18—F10A1.3146 (11)
C10—C111.506 (2)C18—F12A1.3697 (11)
C11—C161.397 (3)C18—F10B1.4165 (12)
O1—C1—O2124.93 (16)C13—C12—C17118.76 (16)
O1—C1—C2123.28 (15)C11—C12—C17121.09 (14)
O2—C1—C2111.78 (14)C14—C13—C12120.1 (2)
C3—C2—C7118.36 (15)C14—C13—H13A119.9
C3—C2—C1121.80 (15)C12—C13—H13A119.9
C7—C2—C1119.84 (15)C15—C14—C13120.45 (19)
C4—C3—C2120.00 (17)C15—C14—H14A119.8
C4—C3—C8117.85 (18)C13—C14—H14A119.8
C2—C3—C8122.14 (17)C14—C15—C16120.4 (2)
C5—C4—C3120.63 (18)C14—C15—H15A119.8
C5—C4—H4A119.7C16—C15—H15A119.8
C3—C4—H4A119.7C15—C16—C11120.24 (19)
C6—C5—C4120.08 (17)C15—C16—C18118.50 (17)
C6—C5—H5A120.0C11—C16—C18121.25 (15)
C4—C5—H5A120.0C1—O2—H2A109.5
C5—C6—C7120.36 (18)C10—O3—H3A109.5
C5—C6—H6A119.8F9A—C17—F7A111.7
C7—C6—H6A119.8F7B—C17—F8B107.2
C6—C7—C2120.55 (16)F9A—C17—F8A107.7
C6—C7—C9118.00 (16)F7A—C17—F8A104.9
C2—C7—C9121.45 (15)F7B—C17—F9B103.2
F1—C8—F3105.80 (19)F8B—C17—F9B97.2
F1—C8—F2107.3 (2)F7B—C17—C12118.73 (8)
F3—C8—F2105.3 (2)F9A—C17—C12112.38 (8)
F1—C8—C3112.2 (2)F7A—C17—C12111.79 (8)
F3—C8—C3113.92 (17)F8B—C17—C12114.37 (8)
F2—C8—C3111.77 (18)F8A—C17—C12107.87 (8)
F4—C9—F5107.23 (17)F9B—C17—C12113.47 (8)
F4—C9—F6107.01 (17)F11B—C18—F12B115.7
F5—C9—F6105.48 (16)F11A—C18—F10A109.6
F4—C9—C7111.76 (16)F11A—C18—F12A106.5
F5—C9—C7112.95 (16)F10A—C18—F12A101.0
F6—C9—C7111.98 (16)F11B—C18—F10B97.4
O4—C10—O3123.01 (17)F12B—C18—F10B103.0
O4—C10—C11121.71 (15)F11B—C18—C16113.07 (8)
O3—C10—C11115.25 (15)F12B—C18—C16115.85 (8)
C16—C11—C12118.60 (16)F11A—C18—C16114.75 (8)
C16—C11—C10120.19 (16)F10A—C18—C16113.29 (8)
C12—C11—C10121.10 (16)F12A—C18—C16110.63 (9)
C13—C12—C11120.14 (18)F10B—C18—C16109.27 (9)
C7—C2—C1—O171.5 (2)C12—C11—C10—O499.3 (2)
D—H···AD—HH···AD···AD—H···A
O2—H2A···O4i0.821.822.6340 (19)169
O3—H3A···O10.821.882.6951 (18)176
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2A⋯O4i0.821.822.6340 (19)169
O3—H3A⋯O10.821.882.6951 (18)176

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Helical self-assembly of substituted benzoic acids: influence of weaker X...X and C-H...X interactions.

Authors:  J Narasimha Moorthy; R Natarajan; Prasenjit Mal; P Venugopalan
Journal:  J Am Chem Soc       Date:  2002-06-12       Impact factor: 15.419

  2 in total
  1 in total

1.  A new polymorph of 2,6-bis-(trifluoro-meth-yl)benzoic acid.

Authors:  Nick A Giffin; Arthur D Hendsbee; Jason D Masuda
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-07
  1 in total

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