| Literature DB >> 21583022 |
Abstract
In the title compound, [Zn(C(8)H(3)NO(6))(C(10)H(8)N(2)O(2))(H(2)O)(3)], the Zn(II) ion is coordinated in a distorted octa-hedral geometry by three water mol-ecules, one O atom from a 5-nitro-benzene-1,3-dicarboxyl-ate ligand and two O atoms from a chelating 2,2'-bipyridine N,N'-dioxide ligand. An extensive network of O-H⋯O hydrogen bonds is formed between the water mol-ecules and the carboxyl-ate groups. C-H⋯O inter-actions are also present.Entities:
Year: 2009 PMID: 21583022 PMCID: PMC2969831 DOI: 10.1107/S1600536809015451
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C8H3NO6)(C10H8N2O2)(H2O)3] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1831 reflections | |
| θ = 2.5–25.8° | |
| µ = 1.26 mm−1 | |
| α = 87.217 (3)° | |
| β = 88.436 (3)° | Plate, colourless |
| γ = 87.006 (3)° | 0.20 × 0.19 × 0.15 mm |
| Bruker SMART CCD area-detector diffractometer | 3604 independent reflections |
| Radiation source: fine-focus sealed tube | 2737 reflections with |
| graphite | |
| Detector resolution: 0 pixels mm-1 | θmax = 25.0°, θmin = 1.8° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 6281 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3604 reflections | (Δ/σ)max = 0.001 |
| 316 parameters | Δρmax = 0.62 e Å−3 |
| 15 restraints | Δρmin = −0.52 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.1974 (7) | 0.7637 (5) | 0.4162 (4) | 0.0393 (13) | |
| H1 | 0.2819 | 0.7530 | 0.3629 | 0.047* | |
| C2 | 0.0764 (7) | 0.8456 (5) | 0.3923 (5) | 0.0501 (15) | |
| H2 | 0.0790 | 0.8941 | 0.3239 | 0.060* | |
| C3 | −0.0552 (7) | 0.8599 (5) | 0.4689 (5) | 0.0422 (14) | |
| H3 | −0.1426 | 0.9146 | 0.4510 | 0.051* | |
| C4 | −0.0514 (7) | 0.7907 (5) | 0.5715 (5) | 0.0419 (13) | |
| H4 | −0.1365 | 0.7988 | 0.6245 | 0.050* | |
| C5 | 0.0808 (6) | 0.7082 (4) | 0.5958 (4) | 0.0291 (11) | |
| C6 | 0.0829 (6) | 0.6224 (4) | 0.6979 (4) | 0.0316 (11) | |
| C7 | −0.0296 (7) | 0.5359 (5) | 0.7202 (5) | 0.0446 (14) | |
| H7 | −0.1152 | 0.5322 | 0.6710 | 0.054* | |
| C8 | −0.0185 (7) | 0.4531 (5) | 0.8157 (5) | 0.0467 (15) | |
| H8 | −0.0946 | 0.3931 | 0.8298 | 0.056* | |
| C9 | 0.1038 (7) | 0.4616 (5) | 0.8867 (5) | 0.0437 (14) | |
| H9 | 0.1116 | 0.4074 | 0.9514 | 0.052* | |
| C10 | 0.2200 (6) | 0.5500 (5) | 0.8659 (4) | 0.0383 (12) | |
| H10 | 0.3051 | 0.5543 | 0.9155 | 0.046* | |
| C11 | 0.6375 (6) | 0.7121 (4) | 0.8717 (4) | 0.0319 (11) | |
| C12 | 0.6641 (6) | 0.8090 (4) | 0.9588 (4) | 0.0294 (11) | |
| C13 | 0.6310 (6) | 0.7849 (4) | 1.0732 (4) | 0.0315 (12) | |
| H13 | 0.5928 | 0.7074 | 1.0966 | 0.038* | |
| C14 | 0.6522 (6) | 0.8719 (4) | 1.1562 (4) | 0.0279 (11) | |
| C15 | 0.6128 (6) | 0.8387 (4) | 1.2805 (4) | 0.0313 (12) | |
| C16 | 0.7084 (6) | 0.9882 (4) | 1.1206 (4) | 0.0308 (11) | |
| H16 | 0.7229 | 1.0490 | 1.1732 | 0.037* | |
| C17 | 0.7419 (6) | 1.0105 (4) | 1.0055 (4) | 0.0305 (11) | |
| C18 | 0.7202 (6) | 0.9267 (5) | 0.9228 (4) | 0.0345 (12) | |
| H18 | 0.7417 | 0.9469 | 0.8456 | 0.041* | |
| N1 | 0.1998 (5) | 0.6958 (4) | 0.5163 (3) | 0.0334 (10) | |
| N2 | 0.2069 (5) | 0.6291 (4) | 0.7726 (3) | 0.0337 (10) | |
| N3 | 0.8039 (6) | 1.1326 (4) | 0.9671 (4) | 0.0534 (14) | |
| O1 | 0.3113 (4) | 0.7178 (3) | 0.7539 (3) | 0.0333 (8) | |
| O2 | 0.3271 (4) | 0.6146 (3) | 0.5377 (3) | 0.0321 (8) | |
| O3 | 0.6489 (4) | 0.7466 (3) | 0.7662 (3) | 0.0352 (8) | |
| O4 | 0.6108 (5) | 0.6041 (3) | 0.9116 (3) | 0.0420 (9) | |
| O5 | 0.5983 (5) | 0.7257 (3) | 1.3088 (3) | 0.0444 (10) | |
| O6 | 0.5973 (5) | 0.9246 (3) | 1.3487 (3) | 0.0473 (10) | |
| O7 | 0.8838 (7) | 1.1868 (4) | 1.0367 (4) | 0.0822 (16) | |
| O8 | 0.7846 (7) | 1.1702 (4) | 0.8683 (4) | 0.0804 (16) | |
| O9 | 0.5579 (5) | 0.4929 (3) | 0.7204 (3) | 0.0339 (8) | |
| H9A | 0.546 (7) | 0.418 (2) | 0.732 (4) | 0.051* | |
| H9B | 0.562 (7) | 0.518 (4) | 0.786 (2) | 0.051* | |
| O10 | 0.4917 (6) | 0.8518 (3) | 0.5648 (3) | 0.0561 (12) | |
| H10A | 0.544 (7) | 0.872 (6) | 0.509 (4) | 0.084* | |
| H10B | 0.421 (6) | 0.904 (5) | 0.583 (5) | 0.084* | |
| O11 | 0.6736 (4) | 0.6260 (3) | 0.5182 (3) | 0.0326 (8) | |
| H11A | 0.640 (6) | 0.556 (2) | 0.514 (4) | 0.049* | |
| H11B | 0.644 (6) | 0.664 (4) | 0.458 (3) | 0.049* | |
| Zn1 | 0.50994 (7) | 0.67555 (5) | 0.64551 (4) | 0.0280 (2) |
| C1 | 0.045 (3) | 0.047 (3) | 0.025 (3) | 0.002 (3) | 0.001 (2) | 0.001 (2) |
| C2 | 0.064 (4) | 0.049 (4) | 0.036 (3) | −0.006 (3) | −0.001 (3) | 0.014 (3) |
| C3 | 0.039 (3) | 0.034 (3) | 0.053 (4) | −0.002 (2) | −0.009 (3) | 0.005 (3) |
| C4 | 0.049 (3) | 0.033 (3) | 0.045 (3) | −0.016 (3) | 0.003 (3) | −0.002 (3) |
| C5 | 0.025 (3) | 0.031 (3) | 0.032 (3) | −0.003 (2) | 0.002 (2) | 0.000 (2) |
| C6 | 0.032 (3) | 0.031 (3) | 0.031 (3) | −0.005 (2) | 0.005 (2) | 0.005 (2) |
| C7 | 0.055 (4) | 0.039 (3) | 0.041 (3) | −0.012 (3) | 0.003 (3) | 0.004 (3) |
| C8 | 0.051 (4) | 0.037 (3) | 0.052 (4) | −0.015 (3) | 0.011 (3) | 0.007 (3) |
| C9 | 0.059 (4) | 0.035 (3) | 0.035 (3) | −0.002 (3) | 0.009 (3) | 0.011 (2) |
| C10 | 0.041 (3) | 0.042 (3) | 0.032 (3) | 0.003 (2) | 0.003 (2) | −0.002 (2) |
| C11 | 0.039 (3) | 0.032 (3) | 0.026 (3) | −0.004 (2) | 0.001 (2) | −0.007 (2) |
| C12 | 0.040 (3) | 0.025 (3) | 0.022 (3) | −0.003 (2) | 0.001 (2) | 0.000 (2) |
| C13 | 0.053 (3) | 0.017 (2) | 0.024 (3) | −0.004 (2) | 0.005 (2) | −0.004 (2) |
| C14 | 0.036 (3) | 0.027 (3) | 0.020 (2) | −0.002 (2) | 0.003 (2) | 0.000 (2) |
| C15 | 0.046 (3) | 0.021 (3) | 0.027 (3) | −0.006 (2) | 0.005 (2) | −0.007 (2) |
| C16 | 0.036 (3) | 0.027 (3) | 0.029 (3) | −0.005 (2) | 0.004 (2) | −0.004 (2) |
| C17 | 0.037 (3) | 0.021 (2) | 0.034 (3) | −0.010 (2) | 0.009 (2) | −0.002 (2) |
| C18 | 0.045 (3) | 0.038 (3) | 0.021 (3) | −0.011 (2) | 0.008 (2) | 0.005 (2) |
| N1 | 0.049 (3) | 0.028 (2) | 0.024 (2) | −0.0079 (19) | −0.001 (2) | −0.0047 (18) |
| N2 | 0.048 (3) | 0.028 (2) | 0.025 (2) | −0.0071 (19) | 0.012 (2) | 0.0035 (18) |
| N3 | 0.083 (4) | 0.034 (3) | 0.043 (3) | −0.021 (3) | 0.028 (3) | −0.007 (2) |
| O1 | 0.0317 (18) | 0.035 (2) | 0.0343 (19) | −0.0105 (15) | 0.0064 (15) | −0.0039 (15) |
| O2 | 0.0346 (19) | 0.0302 (19) | 0.0315 (19) | 0.0060 (15) | −0.0029 (15) | −0.0078 (15) |
| O3 | 0.056 (2) | 0.035 (2) | 0.0162 (17) | −0.0189 (17) | 0.0065 (16) | −0.0040 (14) |
| O4 | 0.075 (3) | 0.027 (2) | 0.0250 (19) | −0.0127 (18) | −0.0032 (18) | −0.0032 (15) |
| O5 | 0.089 (3) | 0.0219 (19) | 0.0234 (19) | −0.0153 (18) | 0.0033 (19) | 0.0003 (14) |
| O6 | 0.089 (3) | 0.028 (2) | 0.0233 (19) | −0.0018 (19) | 0.0155 (19) | −0.0030 (16) |
| O7 | 0.141 (5) | 0.055 (3) | 0.056 (3) | −0.055 (3) | 0.033 (3) | −0.023 (2) |
| O8 | 0.136 (5) | 0.056 (3) | 0.051 (3) | −0.041 (3) | 0.012 (3) | 0.019 (2) |
| O9 | 0.054 (2) | 0.0217 (18) | 0.0266 (19) | −0.0063 (17) | −0.0021 (17) | −0.0016 (15) |
| O10 | 0.118 (4) | 0.021 (2) | 0.028 (2) | −0.003 (2) | 0.026 (2) | −0.0001 (16) |
| O11 | 0.048 (2) | 0.0273 (19) | 0.0229 (19) | −0.0100 (17) | 0.0039 (16) | 0.0005 (15) |
| Zn1 | 0.0418 (4) | 0.0228 (3) | 0.0197 (3) | −0.0056 (2) | 0.0028 (2) | −0.0024 (2) |
| C1—C2 | 1.325 (7) | C13—H13 | 0.9300 |
| C1—N1 | 1.344 (6) | C14—C16 | 1.393 (6) |
| C1—H1 | 0.9300 | C14—C15 | 1.507 (6) |
| C2—C3 | 1.399 (8) | C15—O6 | 1.243 (5) |
| C2—H2 | 0.9300 | C15—O5 | 1.249 (5) |
| C3—C4 | 1.375 (7) | C16—C17 | 1.374 (6) |
| C3—H3 | 0.9300 | C16—H16 | 0.9300 |
| C4—C5 | 1.398 (7) | C17—C18 | 1.370 (6) |
| C4—H4 | 0.9300 | C17—N3 | 1.475 (6) |
| C5—N1 | 1.342 (6) | C18—H18 | 0.9300 |
| C5—C6 | 1.468 (6) | N1—O2 | 1.353 (5) |
| C6—C7 | 1.361 (7) | N2—O1 | 1.325 (5) |
| C6—N2 | 1.374 (6) | N3—O8 | 1.214 (6) |
| C7—C8 | 1.390 (7) | N3—O7 | 1.244 (6) |
| C7—H7 | 0.9300 | O1—Zn1 | 2.094 (3) |
| C8—C9 | 1.338 (7) | O2—Zn1 | 2.144 (3) |
| C8—H8 | 0.9300 | O3—Zn1 | 2.043 (3) |
| C9—C10 | 1.394 (7) | O9—Zn1 | 2.125 (3) |
| C9—H9 | 0.9300 | O9—H9A | 0.816 (19) |
| C10—N2 | 1.349 (6) | O9—H9B | 0.821 (19) |
| C10—H10 | 0.9300 | O10—Zn1 | 2.067 (3) |
| C11—O4 | 1.254 (5) | O10—H10A | 0.80 (2) |
| C11—O3 | 1.268 (5) | O10—H10B | 0.818 (19) |
| C11—C12 | 1.514 (6) | O11—Zn1 | 2.054 (4) |
| C12—C13 | 1.370 (6) | O11—H11A | 0.814 (19) |
| C12—C18 | 1.407 (6) | O11—H11B | 0.833 (19) |
| C13—C14 | 1.395 (6) | ||
| C2—C1—N1 | 120.9 (5) | C17—C16—C14 | 118.1 (4) |
| C2—C1—H1 | 119.5 | C17—C16—H16 | 121.0 |
| N1—C1—H1 | 119.5 | C14—C16—H16 | 121.0 |
| C1—C2—C3 | 120.7 (5) | C18—C17—C16 | 124.3 (4) |
| C1—C2—H2 | 119.7 | C18—C17—N3 | 117.2 (4) |
| C3—C2—H2 | 119.7 | C16—C17—N3 | 118.6 (4) |
| C4—C3—C2 | 118.0 (5) | C17—C18—C12 | 117.7 (4) |
| C4—C3—H3 | 121.0 | C17—C18—H18 | 121.2 |
| C2—C3—H3 | 121.0 | C12—C18—H18 | 121.2 |
| C3—C4—C5 | 119.9 (5) | C5—N1—C1 | 121.6 (5) |
| C3—C4—H4 | 120.1 | C5—N1—O2 | 119.5 (4) |
| C5—C4—H4 | 120.1 | C1—N1—O2 | 118.9 (4) |
| N1—C5—C4 | 118.8 (5) | O1—N2—C10 | 120.1 (4) |
| N1—C5—C6 | 118.7 (4) | O1—N2—C6 | 118.9 (4) |
| C4—C5—C6 | 122.0 (4) | C10—N2—C6 | 121.0 (4) |
| C7—C6—N2 | 119.1 (5) | O8—N3—O7 | 123.8 (5) |
| C7—C6—C5 | 123.2 (5) | O8—N3—C17 | 118.8 (5) |
| N2—C6—C5 | 117.8 (4) | O7—N3—C17 | 117.2 (5) |
| C6—C7—C8 | 121.0 (5) | N2—O1—Zn1 | 116.6 (3) |
| C6—C7—H7 | 119.5 | N1—O2—Zn1 | 117.1 (2) |
| C8—C7—H7 | 119.5 | C11—O3—Zn1 | 121.9 (3) |
| C9—C8—C7 | 118.6 (5) | Zn1—O9—H9A | 157 (4) |
| C9—C8—H8 | 120.7 | Zn1—O9—H9B | 93 (3) |
| C7—C8—H8 | 120.7 | H9A—O9—H9B | 102 (4) |
| C8—C9—C10 | 121.4 (5) | Zn1—O10—H10A | 124 (4) |
| C8—C9—H9 | 119.3 | Zn1—O10—H10B | 122 (4) |
| C10—C9—H9 | 119.3 | H10A—O10—H10B | 114 (5) |
| N2—C10—C9 | 119.0 (5) | Zn1—O11—H11A | 94 (4) |
| N2—C10—H10 | 120.5 | Zn1—O11—H11B | 107 (4) |
| C9—C10—H10 | 120.5 | H11A—O11—H11B | 104 (4) |
| O4—C11—O3 | 126.4 (4) | O3—Zn1—O11 | 103.59 (13) |
| O4—C11—C12 | 116.2 (4) | O3—Zn1—O10 | 88.62 (16) |
| O3—C11—C12 | 117.4 (4) | O11—Zn1—O10 | 87.49 (15) |
| C13—C12—C18 | 118.8 (4) | O3—Zn1—O1 | 86.88 (13) |
| C13—C12—C11 | 120.9 (4) | O11—Zn1—O1 | 169.46 (12) |
| C18—C12—C11 | 120.3 (4) | O10—Zn1—O1 | 91.57 (15) |
| C12—C13—C14 | 122.7 (4) | O3—Zn1—O9 | 89.47 (13) |
| C12—C13—H13 | 118.6 | O11—Zn1—O9 | 86.47 (13) |
| C14—C13—H13 | 118.6 | O10—Zn1—O9 | 173.05 (17) |
| C16—C14—C13 | 118.4 (4) | O1—Zn1—O9 | 95.00 (13) |
| C16—C14—C15 | 121.9 (4) | O3—Zn1—O2 | 169.33 (13) |
| C13—C14—C15 | 119.7 (4) | O11—Zn1—O2 | 86.92 (12) |
| O6—C15—O5 | 124.0 (5) | O10—Zn1—O2 | 90.04 (16) |
| O6—C15—C14 | 118.4 (4) | O1—Zn1—O2 | 82.58 (12) |
| O5—C15—C14 | 117.6 (4) | O9—Zn1—O2 | 93.05 (13) |
| H··· | ||||
| O9—H9A···O5i | 0.82 (3) | 2.08 (4) | 2.773 (5) | 143 (5) |
| O9—H9B···O4 | 0.83 (3) | 1.83 (3) | 2.635 (5) | 164 (4) |
| O10—H10A···O6ii | 0.81 (5) | 1.96 (5) | 2.735 (5) | 161 (6) |
| O10—H10B···O6iii | 0.82 (5) | 2.03 (5) | 2.702 (5) | 139 (5) |
| O11—H11A···O2iv | 0.82 (3) | 1.95 (3) | 2.687 (5) | 149 (5) |
| O11—H11B···O5ii | 0.83 (3) | 1.87 (4) | 2.692 (5) | 169 (4) |
| C2—H2···O8v | 0.93 | 2.59 | 3.229 (8) | 126 |
| C3—H3···O6vi | 0.93 | 2.49 | 3.269 (7) | 141 |
| C4—H4···O3vii | 0.93 | 2.46 | 3.358 (7) | 162 |
| C13—H13···O4i | 0.93 | 2.47 | 2.780 (6) | 100 |
Selected bond lengths (Å)
| O1—Zn1 | 2.094 (3) |
| O2—Zn1 | 2.144 (3) |
| O3—Zn1 | 2.043 (3) |
| O9—Zn1 | 2.125 (3) |
| O10—Zn1 | 2.067 (3) |
| O11—Zn1 | 2.054 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O9—H9 | 0.82 (3) | 2.08 (4) | 2.773 (5) | 143 (5) |
| O9—H9 | 0.83 (3) | 1.83 (3) | 2.635 (5) | 164 (4) |
| O10—H10 | 0.81 (5) | 1.96 (5) | 2.735 (5) | 161 (6) |
| O10—H10 | 0.82 (5) | 2.03 (5) | 2.702 (5) | 139 (5) |
| O11—H11 | 0.82 (3) | 1.95 (3) | 2.687 (5) | 149 (5) |
| O11—H11 | 0.83 (3) | 1.87 (4) | 2.692 (5) | 169 (4) |
| C2—H2⋯O8v | 0.93 | 2.59 | 3.229 (8) | 126 |
| C3—H3⋯O6vi | 0.93 | 2.49 | 3.269 (7) | 141 |
| C4—H4⋯O3vii | 0.93 | 2.46 | 3.358 (7) | 162 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .