Literature DB >> 21583018

Bis(μ-5-carboxyl-ato-1-carboxyl-ato-methyl-2-oxidopyridinium)-κO:O;κO:O-[diaqua-(phenan-throline-κN,N')manganese(II)] dihydrate.

Mei-Xiang Jiang1, Yun-Long Feng.   

Abstract

The centrosymmetric binuclear title complex, [Mn(2)(C(8)H(5)NO(5))(2)(C(12)n class="Species">H(8)N(2))(2)(H(2)O)(4)]·2H(2)O, was obtained by the reaction of manganese chloride with 5-carb-oxy-1-carboxy-methyl-2-oxidopyridinium and 1,10-phenanthroline. The Mn(II) atom is coordinated by two N atoms from the 1,10-phenanthroline ligand, two O atoms from two 5-carboxyl-ato-1-carboxyl-atomethyl-2-oxidopyridinium ligands and two water mol-ecules, leading to a distorted octahedral MnN(2)O(4) environment. Inter-molecular O-H⋯O hydrogen bonds link neighbouring mol-ecules into a layer structure parallel to (001).

Entities:  

Year:  2009        PMID: 21583018      PMCID: PMC2969745          DOI: 10.1107/S1600536809017668

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of compounds with multicarboxyl­ate ligands and metal centers, see: He et al. (2008 ▶); Huang et al. (2008 ▶); Jiang et al. (2009 ▶); Tong et al. (2005 ▶).

Experimental

Crystal data

[Mn2(C8H5NO5)2(C12H8N2)2(H2O)4]·2H2O M = 968.64 Triclinic, a = 7.7726 (11) Å b = 9.9519 (14) Å c = 15.411 (3) Å α = 98.744 (10)° β = 103.553 (10)° γ = 110.252 (7)° V = 1051.1 (3) Å3 Z = 1 Mo Kα radiation μ = 0.68 mm−1 T = 293 K 0.60 × 0.15 × 0.10 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.885, T max = 0.934 19359 measured reflections 4779 independent reflections 3675 reflections with I > 2σ(I) R int = 0.171

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.141 S = 1.00 4779 reflections 307 parameters 9 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.81 e Å−3 Δρmin = −0.79 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809017668/at2783sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809017668/at2783Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mn2(C8H5NO5)2(C12H8N2)2(H2O)4]·2H2OV = 1051.1 (3) Å3
Mr = 968.64Z = 1
Triclinic, P1F(000) = 498
Hall symbol: -P 1Dx = 1.530 Mg m3
a = 7.7726 (11) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.9519 (14) Åθ = 2.8–27.5°
c = 15.411 (3) ŵ = 0.68 mm1
α = 98.744 (10)°T = 293 K
β = 103.553 (10)°Block, yellow
γ = 110.252 (7)°0.60 × 0.15 × 0.10 mm
Bruker APEXII area-detector diffractometer4779 independent reflections
Radiation source: fine-focus sealed tube3675 reflections with I > 2σ(I)
graphiteRint = 0.171
ω scansθmax = 27.5°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.885, Tmax = 0.934k = −12→12
19359 measured reflectionsl = −19→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.141H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.083P)2 + 0.0025P] where P = (Fo2 + 2Fc2)/3
4779 reflections(Δ/σ)max = 0.001
307 parametersΔρmax = 0.81 e Å3
9 restraintsΔρmin = −0.79 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mn10.34180 (4)0.38197 (3)0.24659 (2)0.03192 (14)
C10.8430 (3)0.9583 (2)0.60141 (17)0.0399 (5)
H1A0.73650.95750.55330.048*
H1B0.93351.06050.62840.048*
C20.7670 (3)0.89610 (18)0.67529 (14)0.0334 (4)
C31.1327 (3)0.9121 (2)0.60386 (16)0.0416 (5)
C41.2123 (3)0.8185 (2)0.56435 (17)0.0447 (5)
H41.34210.83880.59050.054*
C51.1068 (3)0.7009 (2)0.49014 (16)0.0397 (5)
H51.16400.64230.46630.048*
C60.9079 (3)0.66801 (19)0.44911 (15)0.0350 (5)
C70.8321 (3)0.75625 (19)0.48720 (15)0.0358 (5)
H70.70160.73440.46200.043*
C80.7808 (3)0.5421 (2)0.36561 (15)0.0363 (5)
C9−0.0500 (3)0.1365 (2)0.09487 (19)0.0561 (7)
H9−0.06410.09260.14330.067*
C10−0.1881 (4)0.0671 (3)0.0077 (2)0.0672 (9)
H10−0.2900−0.0226−0.00120.081*
C11−0.1736 (3)0.1298 (2)−0.06335 (19)0.0565 (7)
H11−0.26540.0839−0.12120.068*
C12−0.0184 (3)0.2654 (2)−0.04935 (16)0.0413 (5)
C130.0048 (3)0.3422 (3)−0.11964 (18)0.0506 (6)
H13−0.08210.2997−0.17890.061*
C140.1498 (3)0.4747 (3)−0.10162 (17)0.0495 (6)
H140.16070.5238−0.14810.059*
C150.2884 (3)0.5414 (2)−0.01126 (16)0.0405 (5)
C160.4418 (4)0.6812 (2)0.01077 (19)0.0509 (6)
H160.45840.7336−0.03380.061*
C170.5659 (3)0.7382 (2)0.09913 (19)0.0509 (6)
H170.66600.83120.11560.061*
C180.5416 (3)0.6564 (2)0.16410 (17)0.0429 (5)
H180.62890.69620.22340.051*
C190.2732 (3)0.46827 (18)0.05867 (14)0.0331 (4)
C200.1150 (3)0.32712 (18)0.04029 (14)0.0338 (4)
O1W0.2082 (2)0.51934 (15)0.30069 (13)0.0469 (4)
H1WA0.107 (3)0.494 (3)0.3146 (19)0.056*
H1WB0.262 (3)0.6101 (18)0.3185 (18)0.056*
O10.6879 (2)0.96382 (15)0.71523 (12)0.0473 (4)
O2W0.5101 (2)0.24567 (16)0.20164 (12)0.0439 (4)
H2WA0.612 (3)0.297 (2)0.2403 (16)0.053*
H2WB0.459 (3)0.177 (2)0.2261 (16)0.053*
O20.7879 (2)0.78107 (15)0.68951 (12)0.0440 (4)
O31.2212 (2)1.02222 (18)0.67190 (14)0.0640 (6)
O3W0.5827 (3)1.18225 (16)0.65623 (18)0.0688 (6)
H3WA0.632 (4)1.129 (3)0.680 (2)0.083*
H3WB0.471 (3)1.149 (3)0.659 (2)0.083*
O40.84928 (19)0.46805 (15)0.32338 (12)0.0449 (4)
O50.6043 (2)0.52140 (18)0.34392 (12)0.0526 (5)
N10.9381 (2)0.87521 (16)0.56051 (13)0.0361 (4)
N20.3998 (2)0.52424 (16)0.14566 (13)0.0351 (4)
N30.0999 (2)0.26257 (16)0.11052 (13)0.0390 (4)
U11U22U33U12U13U23
Mn10.03112 (19)0.02749 (17)0.0329 (2)0.00883 (12)0.00698 (15)0.00713 (12)
C10.0513 (11)0.0308 (8)0.0417 (13)0.0170 (8)0.0180 (10)0.0135 (8)
C20.0322 (9)0.0295 (8)0.0345 (12)0.0102 (7)0.0072 (8)0.0069 (7)
C30.0390 (10)0.0365 (9)0.0403 (13)0.0071 (8)0.0112 (9)0.0057 (8)
C40.0306 (9)0.0466 (10)0.0455 (14)0.0107 (8)0.0024 (9)0.0055 (9)
C50.0340 (9)0.0377 (9)0.0433 (13)0.0132 (8)0.0079 (9)0.0079 (8)
C60.0318 (9)0.0330 (8)0.0348 (12)0.0092 (7)0.0055 (8)0.0098 (8)
C70.0331 (9)0.0334 (8)0.0360 (12)0.0088 (7)0.0066 (8)0.0118 (8)
C80.0336 (9)0.0343 (8)0.0361 (12)0.0094 (7)0.0079 (8)0.0094 (8)
C90.0537 (13)0.0374 (10)0.0535 (17)−0.0012 (9)0.0010 (12)0.0158 (10)
C100.0565 (14)0.0399 (11)0.066 (2)−0.0090 (10)−0.0065 (13)0.0106 (12)
C110.0491 (12)0.0441 (11)0.0491 (17)0.0073 (9)−0.0067 (11)−0.0029 (10)
C120.0399 (10)0.0406 (9)0.0383 (13)0.0177 (8)0.0041 (9)0.0038 (8)
C130.0523 (12)0.0593 (13)0.0370 (14)0.0270 (11)0.0037 (10)0.0076 (10)
C140.0587 (13)0.0624 (13)0.0383 (14)0.0315 (11)0.0165 (11)0.0235 (11)
C150.0467 (11)0.0407 (9)0.0425 (13)0.0223 (9)0.0184 (10)0.0151 (9)
C160.0622 (14)0.0437 (11)0.0559 (16)0.0202 (10)0.0270 (12)0.0265 (10)
C170.0540 (13)0.0328 (9)0.0608 (18)0.0071 (9)0.0225 (12)0.0149 (10)
C180.0422 (10)0.0306 (8)0.0455 (15)0.0061 (8)0.0113 (10)0.0039 (8)
C190.0364 (9)0.0291 (8)0.0360 (12)0.0156 (7)0.0120 (8)0.0068 (7)
C200.0350 (9)0.0301 (8)0.0347 (12)0.0144 (7)0.0076 (8)0.0050 (7)
O1W0.0401 (8)0.0323 (6)0.0712 (13)0.0146 (6)0.0243 (8)0.0096 (7)
O10.0589 (9)0.0417 (7)0.0532 (11)0.0275 (7)0.0266 (8)0.0131 (7)
O2W0.0446 (8)0.0401 (7)0.0439 (11)0.0140 (6)0.0143 (7)0.0084 (7)
O20.0562 (9)0.0403 (7)0.0529 (11)0.0258 (6)0.0295 (8)0.0251 (7)
O30.0481 (9)0.0496 (9)0.0649 (14)0.0037 (7)0.0082 (8)−0.0152 (8)
O3W0.0591 (10)0.0344 (7)0.1180 (19)0.0198 (7)0.0337 (12)0.0212 (9)
O40.0352 (7)0.0413 (7)0.0505 (11)0.0110 (6)0.0120 (7)0.0020 (7)
O50.0323 (7)0.0601 (9)0.0504 (11)0.0180 (7)0.0006 (7)−0.0080 (8)
N10.0384 (8)0.0304 (7)0.0386 (11)0.0108 (6)0.0135 (7)0.0104 (7)
N20.0344 (8)0.0282 (7)0.0383 (11)0.0085 (6)0.0113 (7)0.0058 (6)
N30.0376 (8)0.0286 (7)0.0411 (11)0.0059 (6)0.0063 (8)0.0085 (7)
Mn1—O52.0761 (14)C10—C111.348 (4)
Mn1—O2i2.1066 (15)C10—H100.9300
Mn1—O1W2.1643 (15)C11—C121.409 (3)
Mn1—N22.2768 (18)C11—H110.9300
Mn1—N32.2788 (17)C12—C201.411 (3)
Mn1—O2W2.3237 (17)C12—C131.428 (3)
C1—N11.454 (3)C13—C141.341 (3)
C1—C21.518 (3)C13—H130.9300
C1—H1A0.9700C14—C151.436 (3)
C1—H1B0.9700C14—H140.9300
C2—O11.245 (2)C15—C191.394 (3)
C2—O21.254 (2)C15—C161.411 (3)
C3—O31.251 (2)C16—C171.370 (4)
C3—N11.391 (3)C16—H160.9300
C3—C41.423 (3)C17—C181.390 (3)
C4—C51.356 (3)C17—H170.9300
C4—H40.9300C18—N21.327 (2)
C5—C61.423 (3)C18—H180.9300
C5—H50.9300C19—N21.361 (3)
C6—C71.352 (3)C19—C201.444 (2)
C6—C81.503 (3)C20—N31.348 (3)
C7—N11.356 (2)O1W—H1WA0.831 (16)
C7—H70.9300O1W—H1WB0.822 (15)
C8—O41.240 (3)O2W—H2WA0.807 (16)
C8—O51.267 (2)O2W—H2WB0.856 (16)
C9—N31.324 (2)O2—Mn1i2.1066 (15)
C9—C101.401 (3)O3W—H3WA0.833 (17)
C9—H90.9300O3W—H3WB0.833 (17)
O5—Mn1—O2i105.32 (7)C10—C11—C12119.5 (2)
O5—Mn1—O1W89.47 (6)C10—C11—H11120.2
O2i—Mn1—O1W90.24 (6)C12—C11—H11120.2
O5—Mn1—N290.90 (7)C11—C12—C20116.6 (2)
O2i—Mn1—N2163.71 (6)C11—C12—C13123.4 (2)
O1W—Mn1—N288.34 (7)C20—C12—C13120.00 (19)
O5—Mn1—N3162.47 (8)C14—C13—C12121.1 (2)
O2i—Mn1—N391.35 (6)C14—C13—H13119.5
O1W—Mn1—N395.98 (7)C12—C13—H13119.5
N2—Mn1—N372.68 (6)C13—C14—C15120.6 (2)
O5—Mn1—O2W85.20 (6)C13—C14—H14119.7
O2i—Mn1—O2W89.67 (6)C15—C14—H14119.7
O1W—Mn1—O2W174.44 (6)C19—C15—C16117.6 (2)
N2—Mn1—O2W93.29 (6)C19—C15—C14120.02 (19)
N3—Mn1—O2W89.58 (6)C16—C15—C14122.4 (2)
N1—C1—C2112.73 (16)C17—C16—C15118.7 (2)
N1—C1—H1A109.0C17—C16—H16120.7
C2—C1—H1A109.0C15—C16—H16120.7
N1—C1—H1B109.0C16—C17—C18119.7 (2)
C2—C1—H1B109.0C16—C17—H17120.1
H1A—C1—H1B107.8C18—C17—H17120.1
O1—C2—O2126.3 (2)N2—C18—C17123.2 (2)
O1—C2—C1116.48 (17)N2—C18—H18118.4
O2—C2—C1117.18 (19)C17—C18—H18118.4
O3—C3—N1118.6 (2)N2—C19—C15123.24 (17)
O3—C3—C4126.2 (2)N2—C19—C20117.09 (18)
N1—C3—C4115.20 (17)C15—C19—C20119.66 (18)
C5—C4—C3122.79 (19)N3—C20—C12123.26 (18)
C5—C4—H4118.6N3—C20—C19118.13 (17)
C3—C4—H4118.6C12—C20—C19118.59 (19)
C4—C5—C6119.4 (2)Mn1—O1W—H1WA128.8 (17)
C4—C5—H5120.3Mn1—O1W—H1WB122.9 (17)
C6—C5—H5120.3H1WA—O1W—H1WB108 (2)
C7—C6—C5117.71 (18)Mn1—O2W—H2WA96 (2)
C7—C6—C8119.05 (17)Mn1—O2W—H2WB93.0 (18)
C5—C6—C8123.23 (19)H2WA—O2W—H2WB104 (2)
C6—C7—N1122.87 (18)C2—O2—Mn1i134.18 (16)
C6—C7—H7118.6H3WA—O3W—H3WB104 (2)
N1—C7—H7118.6C8—O5—Mn1140.26 (15)
O4—C8—O5124.86 (19)C7—N1—C3121.96 (18)
O4—C8—C6120.83 (18)C7—N1—C1119.42 (17)
O5—C8—C6114.31 (19)C3—N1—C1118.32 (17)
N3—C9—C10122.1 (2)C18—N2—C19117.50 (19)
N3—C9—H9118.9C18—N2—Mn1126.40 (15)
C10—C9—H9118.9C19—N2—Mn1116.08 (12)
C11—C10—C9120.2 (2)C9—N3—C20118.22 (18)
C11—C10—H10119.9C9—N3—Mn1125.89 (16)
C9—C10—H10119.9C20—N3—Mn1115.89 (12)
N1—C1—C2—O1178.22 (17)N2—Mn1—O5—C8−84.9 (3)
N1—C1—C2—O2−2.5 (3)N3—Mn1—O5—C8−64.8 (4)
O3—C3—C4—C5−179.9 (3)O2W—Mn1—O5—C88.3 (3)
N1—C3—C4—C5−0.4 (3)C6—C7—N1—C3−2.2 (3)
C3—C4—C5—C60.0 (4)C6—C7—N1—C1−175.7 (2)
C4—C5—C6—C7−0.6 (3)O3—C3—N1—C7−179.1 (2)
C4—C5—C6—C8178.7 (2)C4—C3—N1—C71.5 (3)
C5—C6—C7—N11.6 (3)O3—C3—N1—C1−5.4 (3)
C8—C6—C7—N1−177.63 (18)C4—C3—N1—C1175.09 (19)
C7—C6—C8—O4172.8 (2)C2—C1—N1—C787.7 (2)
C5—C6—C8—O4−6.4 (3)C2—C1—N1—C3−86.1 (2)
C7—C6—C8—O5−6.9 (3)C17—C18—N2—C19−0.3 (3)
C5—C6—C8—O5173.9 (2)C17—C18—N2—Mn1−178.77 (18)
N3—C9—C10—C11−1.5 (5)C15—C19—N2—C181.4 (3)
C9—C10—C11—C120.2 (5)C20—C19—N2—C18−177.59 (18)
C10—C11—C12—C200.3 (4)C15—C19—N2—Mn1−179.97 (16)
C10—C11—C12—C13−177.8 (3)C20—C19—N2—Mn11.1 (2)
C11—C12—C13—C14176.6 (2)O5—Mn1—N2—C18−9.93 (18)
C20—C12—C13—C14−1.5 (4)O2i—Mn1—N2—C18164.7 (2)
C12—C13—C14—C151.3 (4)O1W—Mn1—N2—C1879.51 (18)
C13—C14—C15—C190.2 (3)N3—Mn1—N2—C18176.30 (19)
C13—C14—C15—C16−179.3 (2)O2W—Mn1—N2—C18−95.17 (18)
C19—C15—C16—C17−0.7 (3)O5—Mn1—N2—C19171.54 (14)
C14—C15—C16—C17178.9 (2)O2i—Mn1—N2—C19−13.9 (3)
C15—C16—C17—C181.7 (4)O1W—Mn1—N2—C19−99.02 (14)
C16—C17—C18—N2−1.3 (4)N3—Mn1—N2—C19−2.23 (13)
C16—C15—C19—N2−0.9 (3)O2W—Mn1—N2—C1986.30 (14)
C14—C15—C19—N2179.6 (2)C10—C9—N3—C202.0 (4)
C16—C15—C19—C20178.02 (19)C10—C9—N3—Mn1−177.0 (2)
C14—C15—C19—C20−1.5 (3)C12—C20—N3—C9−1.4 (3)
C11—C12—C20—N30.2 (3)C19—C20—N3—C9176.9 (2)
C13—C12—C20—N3178.5 (2)C12—C20—N3—Mn1177.73 (16)
C11—C12—C20—C19−178.11 (19)C19—C20—N3—Mn1−3.9 (2)
C13—C12—C20—C190.1 (3)O5—Mn1—N3—C9161.2 (2)
N2—C19—C20—N31.9 (3)O2i—Mn1—N3—C9−0.9 (2)
C15—C19—C20—N3−177.08 (18)O1W—Mn1—N3—C9−91.3 (2)
N2—C19—C20—C12−179.65 (18)N2—Mn1—N3—C9−177.7 (2)
C15—C19—C20—C121.4 (3)O2W—Mn1—N3—C988.7 (2)
O1—C2—O2—Mn1i17.7 (3)O5—Mn1—N3—C20−17.9 (3)
C1—C2—O2—Mn1i−161.47 (15)O2i—Mn1—N3—C20179.98 (15)
O4—C8—O5—Mn11.0 (4)O1W—Mn1—N3—C2089.60 (15)
C6—C8—O5—Mn1−179.30 (18)N2—Mn1—N3—C203.23 (14)
O2i—Mn1—O5—C896.6 (3)O2W—Mn1—N3—C20−90.35 (15)
O1W—Mn1—O5—C8−173.3 (3)
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O4ii0.83 (2)1.97 (2)2.773 (2)163 (3)
O1W—H1WB···O3Wiii0.82 (2)1.92 (2)2.730 (2)169 (3)
O2W—H2WA···O40.81 (2)2.00 (2)2.783 (2)164 (2)
O2W—H2WA···O50.81 (2)2.57 (3)2.984 (2)114 (2)
O2W—H2WB···O1i0.86 (2)1.96 (2)2.806 (2)170 (3)
O3W—H3WA···O10.83 (2)1.96 (2)2.775 (2)165 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O4i0.831 (16)1.967 (18)2.773 (2)163 (3)
O1W—H1WB⋯O3Wii0.822 (15)1.920 (15)2.730 (2)169 (3)
O2W—H2WA⋯O40.807 (16)1.998 (15)2.783 (2)164 (2)
O2W—H2WA⋯O50.807 (16)2.57 (3)2.984 (2)114 (2)
O2W—H2WB⋯O1iii0.856 (16)1.959 (16)2.806 (2)170 (3)
O3W—H3WA⋯O10.833 (17)1.962 (19)2.775 (2)165 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  Bis(μ-biphenyl-2,2'-dicarboxyl-ato)bis-[aqua-(4,4'-dimethyl-2,2'-bipyridine-κN,N')copper(II)].

Authors:  Xi-Yan Dong; Xiao-Jie Xu; Lei Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-17
  1 in total

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