| Literature DB >> 21582910 |
Abstract
The title mol-ecule, C(9)H(9)N(3)O(4), syhthesized from 1H-pyrazole-3,5-dicarboxylic acid and 2-bromo-acetonitrile, is approximately planar; the inter-planar angles between the pyrazole ring and the mean planes of the two carboxylate units and the cyanomethyl unit are 4.49 (10), 5.56 (9) and 5.03 (19)°, respectively. In the crystal, inversion dimers linked by pairs of weak C-H ⋯O bonds occur, and the packing is further stabilized by aromatic π-π stacking [centroid-centroid separation = 3.793 (4) Å].Entities:
Year: 2009 PMID: 21582910 PMCID: PMC2969226 DOI: 10.1107/S160053680902306X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H9N3O4 | |
| Triclinic, | |
| Mo | |
| µ = 0.11 mm−1 | |
| α = 71.633 (8)° | |
| β = 80.625 (10)° | Prism, colourless |
| γ = 68.195 (6)° | 0.25 × 0.17 × 0.15 mm |
| Rigaku SCXmini diffractometer | 2356 independent reflections |
| Radiation source: fine-focus sealed tube | 1363 reflections with |
| graphite | |
| CCD_Profile_fitting scans | θmax = 27.5°, θmin = 2.9° |
| Absorption correction: multi-scan ( | |
| 5303 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2356 reflections | (Δ/σ)max < 0.001 |
| 147 parameters | Δρmax = 0.14 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.3907 (4) | 0.3854 (3) | 0.8442 (2) | 0.0532 (6) | |
| C2 | 0.3416 (4) | 0.3412 (3) | 0.9739 (2) | 0.0526 (6) | |
| H2 | 0.3711 | 0.2192 | 1.0311 | 0.063* | |
| C3 | 0.2401 (4) | 0.5159 (3) | 1.0001 (2) | 0.0499 (6) | |
| C4 | 0.1549 (4) | 0.5643 (4) | 1.1201 (2) | 0.0546 (6) | |
| C5 | 0.1088 (6) | 0.4259 (5) | 1.3408 (3) | 0.0854 (10) | |
| H5A | 0.2016 | 0.4738 | 1.3658 | 0.128* | |
| H5B | 0.1149 | 0.3033 | 1.3989 | 0.128* | |
| H5C | −0.0322 | 0.5153 | 1.3414 | 0.128* | |
| C6 | 0.5019 (4) | 0.2473 (4) | 0.7684 (3) | 0.0598 (7) | |
| C7 | 0.6214 (6) | 0.2060 (4) | 0.5643 (3) | 0.0843 (10) | |
| H7A | 0.7659 | 0.1417 | 0.5851 | 0.126* | |
| H7B | 0.6136 | 0.2814 | 0.4773 | 0.126* | |
| H7C | 0.5551 | 0.1121 | 0.5772 | 0.126* | |
| C8 | 0.1385 (5) | 0.8634 (3) | 0.8624 (3) | 0.0684 (8) | |
| H8A | −0.0104 | 0.8971 | 0.8865 | 0.082* | |
| H8B | 0.2023 | 0.9057 | 0.9142 | 0.082* | |
| C9 | 0.1666 (5) | 0.9611 (4) | 0.7305 (3) | 0.0727 (8) | |
| N1 | 0.2333 (3) | 0.6541 (3) | 0.88623 (19) | 0.0519 (5) | |
| N2 | 0.3246 (3) | 0.5768 (3) | 0.7904 (2) | 0.0554 (6) | |
| N3 | 0.1808 (6) | 1.0496 (4) | 0.6284 (3) | 0.1128 (12) | |
| O1 | 0.0817 (3) | 0.7247 (3) | 1.13202 (17) | 0.0727 (6) | |
| O2 | 0.1727 (3) | 0.4040 (3) | 1.21396 (18) | 0.0693 (6) | |
| O3 | 0.5740 (4) | 0.0765 (3) | 0.8165 (2) | 0.0895 (8) | |
| O4 | 0.5140 (3) | 0.3323 (2) | 0.64578 (17) | 0.0697 (6) |
| C1 | 0.0572 (15) | 0.0334 (12) | 0.0590 (16) | −0.0092 (11) | −0.0024 (12) | −0.0072 (11) |
| C2 | 0.0561 (15) | 0.0386 (13) | 0.0536 (16) | −0.0145 (12) | −0.0002 (12) | −0.0036 (11) |
| C3 | 0.0509 (14) | 0.0420 (14) | 0.0503 (15) | −0.0140 (11) | −0.0028 (11) | −0.0062 (11) |
| C4 | 0.0588 (16) | 0.0464 (15) | 0.0551 (16) | −0.0175 (12) | −0.0031 (12) | −0.0099 (12) |
| C5 | 0.114 (3) | 0.086 (2) | 0.0453 (17) | −0.033 (2) | 0.0022 (16) | −0.0077 (15) |
| C6 | 0.0692 (18) | 0.0396 (14) | 0.0589 (17) | −0.0130 (13) | −0.0013 (13) | −0.0057 (12) |
| C7 | 0.110 (3) | 0.0609 (19) | 0.0632 (19) | −0.0110 (17) | 0.0130 (17) | −0.0222 (15) |
| C8 | 0.090 (2) | 0.0368 (13) | 0.0594 (18) | −0.0099 (14) | −0.0006 (15) | −0.0041 (12) |
| C9 | 0.093 (2) | 0.0416 (14) | 0.066 (2) | −0.0115 (14) | 0.0034 (16) | −0.0100 (13) |
| N1 | 0.0597 (12) | 0.0375 (11) | 0.0487 (12) | −0.0110 (9) | −0.0022 (9) | −0.0058 (9) |
| N2 | 0.0631 (13) | 0.0401 (12) | 0.0516 (13) | −0.0097 (10) | 0.0019 (10) | −0.0092 (9) |
| N3 | 0.167 (3) | 0.0614 (17) | 0.073 (2) | −0.0194 (18) | 0.0156 (19) | −0.0031 (15) |
| O1 | 0.0984 (15) | 0.0522 (12) | 0.0589 (12) | −0.0172 (11) | 0.0024 (10) | −0.0174 (9) |
| O2 | 0.0928 (14) | 0.0542 (11) | 0.0506 (11) | −0.0238 (10) | 0.0010 (9) | −0.0047 (8) |
| O3 | 0.136 (2) | 0.0370 (11) | 0.0682 (14) | −0.0105 (11) | 0.0055 (13) | −0.0070 (9) |
| O4 | 0.0914 (14) | 0.0451 (10) | 0.0536 (12) | −0.0108 (10) | 0.0064 (10) | −0.0083 (8) |
| C1—N2 | 1.344 (3) | C6—O3 | 1.203 (3) |
| C1—C2 | 1.390 (4) | C6—O4 | 1.320 (3) |
| C1—C6 | 1.483 (4) | C7—O4 | 1.461 (3) |
| C2—C3 | 1.378 (3) | C7—H7A | 0.9600 |
| C2—H2 | 0.9300 | C7—H7B | 0.9600 |
| C3—N1 | 1.374 (3) | C7—H7C | 0.9600 |
| C3—C4 | 1.472 (4) | C8—C9 | 1.444 (4) |
| C4—O1 | 1.201 (3) | C8—N1 | 1.464 (3) |
| C4—O2 | 1.330 (3) | C8—H8A | 0.9700 |
| C5—O2 | 1.453 (4) | C8—H8B | 0.9700 |
| C5—H5A | 0.9600 | C9—N3 | 1.139 (4) |
| C5—H5B | 0.9600 | N1—N2 | 1.342 (3) |
| C5—H5C | 0.9600 | ||
| N2—C1—C2 | 111.5 (2) | O4—C6—C1 | 113.0 (2) |
| N2—C1—C6 | 121.5 (2) | O4—C7—H7A | 109.5 |
| C2—C1—C6 | 127.0 (2) | O4—C7—H7B | 109.5 |
| C3—C2—C1 | 105.6 (2) | H7A—C7—H7B | 109.5 |
| C3—C2—H2 | 127.2 | O4—C7—H7C | 109.5 |
| C1—C2—H2 | 127.2 | H7A—C7—H7C | 109.5 |
| N1—C3—C2 | 105.9 (2) | H7B—C7—H7C | 109.5 |
| N1—C3—C4 | 122.6 (2) | C9—C8—N1 | 111.2 (2) |
| C2—C3—C4 | 131.5 (2) | C9—C8—H8A | 109.4 |
| O1—C4—O2 | 124.9 (3) | N1—C8—H8A | 109.4 |
| O1—C4—C3 | 125.2 (2) | C9—C8—H8B | 109.4 |
| O2—C4—C3 | 110.0 (2) | N1—C8—H8B | 109.4 |
| O2—C5—H5A | 109.5 | H8A—C8—H8B | 108.0 |
| O2—C5—H5B | 109.5 | N3—C9—C8 | 175.4 (3) |
| H5A—C5—H5B | 109.5 | N2—N1—C3 | 112.2 (2) |
| O2—C5—H5C | 109.5 | N2—N1—C8 | 120.3 (2) |
| H5A—C5—H5C | 109.5 | C3—N1—C8 | 127.5 (2) |
| H5B—C5—H5C | 109.5 | N1—N2—C1 | 104.8 (2) |
| O3—C6—O4 | 124.8 (3) | C4—O2—C5 | 116.9 (2) |
| O3—C6—C1 | 122.2 (3) | C6—O4—C7 | 116.4 (2) |
| N2—C1—C2—C3 | −0.1 (3) | C4—C3—N1—N2 | 178.5 (2) |
| C6—C1—C2—C3 | 179.7 (3) | C2—C3—N1—C8 | 178.9 (2) |
| C1—C2—C3—N1 | 0.1 (3) | C4—C3—N1—C8 | −2.5 (4) |
| C1—C2—C3—C4 | −178.3 (3) | C9—C8—N1—N2 | −2.1 (4) |
| N1—C3—C4—O1 | −3.7 (4) | C9—C8—N1—C3 | 178.9 (3) |
| C2—C3—C4—O1 | 174.5 (3) | C3—N1—N2—C1 | 0.1 (3) |
| N1—C3—C4—O2 | 176.9 (2) | C8—N1—N2—C1 | −179.0 (2) |
| C2—C3—C4—O2 | −4.8 (4) | C2—C1—N2—N1 | 0.0 (3) |
| N2—C1—C6—O3 | 175.0 (3) | C6—C1—N2—N1 | −179.8 (2) |
| C2—C1—C6—O3 | −4.7 (4) | O1—C4—O2—C5 | −3.5 (4) |
| N2—C1—C6—O4 | −4.3 (4) | C3—C4—O2—C5 | 175.9 (2) |
| C2—C1—C6—O4 | 176.0 (2) | O3—C6—O4—C7 | 0.8 (4) |
| N1—C8—C9—N3 | 176 (5) | C1—C6—O4—C7 | −180.0 (2) |
| C2—C3—N1—N2 | −0.1 (3) |
| H··· | ||||
| C2—H2···O3i | 0.93 | 2.33 | 3.256 (4) | 176 |
| Group 1 | Group 2 | α | Cg–Cg | τ |
| Cg1 | Cg1i | 0.03 | 3.793 (4) | 26.14 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C2—H2⋯O3i | 0.93 | 2.33 | 3.256 (4) | 176 |
Symmetry code: (i) .