Literature DB >> 21582897

2-Hydr-oxy-3-nitro-benzamide.

Abdul Rauf Raza, Muhammad Danish, M Nawaz Tahir, Bushra Nisar, Mohammad S Iqbal.   

Abstract

The asymmetric unit of title compound, C(7)H(6)N(2)O(4), contains two mol-ecules, one of which has a disordered nitro group with an occupancy ratio of 0.517 (9):0.483 (9) for the O atoms. Both mol-ecules contain an intra-molecular O-H⋯O hydrogen bond. In the crystal, both mol-ecules form inversion dimers linked by pairs of N-H⋯O hydrogen bonds, resulting in R(2) (2)(8) ring motifs. The dimers are connected by further N-H⋯O links and weak C-H⋯O inter-actions, resulting in a layered motif.

Entities:  

Year:  2009        PMID: 21582897      PMCID: PMC2969278          DOI: 10.1107/S1600536809022843

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Liu & Zhu (2007 ▶); Pertlik (1990 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C7H6N2O4 M = 182.14 Triclinic, a = 3.8390 (2) Å b = 13.0347 (8) Å c = 16.0409 (9) Å α = 98.207 (3)° β = 95.658 (2)° γ = 98.365 (3)° V = 780.16 (8) Å3 Z = 4 Mo Kα radiation μ = 0.13 mm−1 T = 296 K 0.25 × 0.22 × 0.18 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.966, T max = 0.979 15183 measured reflections 3658 independent reflections 1932 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.139 S = 1.00 3658 reflections 287 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.19 e Å−3 Δρmin = −0.18 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809022843/hb5009sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809022843/hb5009Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H6N2O4Z = 4
Mr = 182.14F(000) = 376
Triclinic, P1Dx = 1.551 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 3.8390 (2) ÅCell parameters from 3658 reflections
b = 13.0347 (8) Åθ = 1.3–27.9°
c = 16.0409 (9) ŵ = 0.13 mm1
α = 98.207 (3)°T = 296 K
β = 95.658 (2)°Prism, brown
γ = 98.365 (3)°0.25 × 0.22 × 0.18 mm
V = 780.16 (8) Å3
Bruker Kappa APEXII CCD diffractometer3658 independent reflections
Radiation source: fine-focus sealed tube1932 reflections with I > 2σ(I)
graphiteRint = 0.039
Detector resolution: 7.40 pixels mm-1θmax = 27.9°, θmin = 1.3°
ω scansh = −5→5
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −17→16
Tmin = 0.966, Tmax = 0.979l = −20→20
15183 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.139H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.0563P)2 + 0.1478P] where P = (Fo2 + 2Fc2)/3
3658 reflections(Δ/σ)max < 0.001
287 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.18 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O51.3003 (4)0.14269 (11)0.28007 (10)0.0574 (6)
O6A1.0846 (17)0.2123 (3)0.1437 (3)0.0622 (16)0.517 (9)
O7A0.9012 (16)0.0976 (4)0.0315 (3)0.0726 (16)0.517 (9)
O81.4309 (4)0.06126 (12)0.40897 (9)0.0602 (6)
N30.9800 (5)0.12260 (17)0.11120 (12)0.0517 (8)
N41.1499 (6)−0.09612 (17)0.42380 (13)0.0584 (7)
C81.0438 (5)−0.03373 (16)0.28965 (12)0.0398 (6)
C91.1008 (5)0.05167 (16)0.24507 (12)0.0390 (6)
C100.9365 (5)0.03748 (17)0.16144 (13)0.0416 (7)
C110.7300 (6)−0.05660 (19)0.12321 (14)0.0488 (8)
C120.6838 (6)−0.1393 (2)0.16654 (14)0.0522 (8)
C130.8391 (6)−0.12754 (18)0.24892 (14)0.0476 (8)
C141.2174 (5)−0.02094 (17)0.37827 (13)0.0442 (7)
O7B1.2731 (16)0.1761 (5)0.1186 (3)0.0686 (17)0.483 (9)
O6B0.7212 (15)0.1376 (4)0.0676 (4)0.0765 (19)0.483 (9)
O11.1680 (4)0.64772 (12)0.23085 (10)0.0576 (6)
O21.6092 (5)0.69953 (13)0.37229 (11)0.0717 (7)
O31.3820 (6)0.64564 (16)0.47695 (12)0.0965 (9)
O40.7934 (4)0.56454 (13)0.09498 (10)0.0650 (6)
N11.4064 (5)0.63841 (15)0.40149 (12)0.0521 (7)
N20.5075 (6)0.40043 (18)0.07421 (14)0.0632 (8)
C10.8539 (5)0.47141 (16)0.21067 (13)0.0412 (7)
C21.0752 (5)0.55872 (16)0.26058 (13)0.0409 (7)
C31.1871 (5)0.54999 (16)0.34496 (13)0.0418 (7)
C41.0917 (6)0.45937 (19)0.37779 (15)0.0492 (8)
C50.8859 (6)0.37445 (19)0.32808 (15)0.0543 (8)
C60.7662 (6)0.38048 (18)0.24564 (14)0.0482 (8)
C70.7143 (6)0.48026 (19)0.12263 (14)0.0475 (8)
H4B0.984 (7)−0.1544 (19)0.4054 (15)0.0701*
H5O1.387390.138130.327900.0689*
H120.533 (7)−0.208 (2)0.1414 (15)0.075 (7)*
H130.808 (6)−0.1821 (18)0.2792 (14)0.0571*
H110.632 (6)−0.0653 (17)0.0674 (15)0.0586*
H4A1.260 (7)−0.0911 (19)0.4746 (17)0.0701*
H1O1.077850.641780.181530.0692*
H2A0.444 (7)0.347 (2)0.0911 (17)0.0758*
H2B0.420 (6)0.4100 (19)0.0199 (17)0.0758*
H41.161 (6)0.4557 (17)0.4324 (15)0.0589*
H50.820 (6)0.3154 (19)0.3482 (15)0.0651*
H60.614 (6)0.3254 (18)0.2137 (14)0.0578*
U11U22U33U12U13U23
O50.0718 (10)0.0450 (10)0.0451 (9)−0.0112 (8)−0.0179 (8)0.0107 (7)
O6A0.079 (3)0.052 (3)0.053 (2)0.000 (2)−0.002 (2)0.0178 (19)
O7A0.075 (3)0.097 (3)0.038 (2)−0.010 (2)−0.011 (2)0.021 (2)
O80.0729 (10)0.0528 (10)0.0431 (9)−0.0137 (8)−0.0177 (8)0.0098 (8)
N30.0482 (12)0.0617 (15)0.0429 (12)0.0011 (10)−0.0054 (9)0.0157 (11)
N40.0716 (14)0.0557 (13)0.0403 (11)−0.0074 (10)−0.0156 (10)0.0154 (10)
C80.0405 (10)0.0413 (12)0.0345 (11)0.0025 (9)−0.0022 (9)0.0042 (10)
C90.0362 (10)0.0402 (12)0.0362 (11)0.0001 (9)−0.0040 (8)0.0032 (9)
C100.0379 (10)0.0486 (14)0.0373 (12)0.0035 (9)−0.0005 (9)0.0108 (10)
C110.0467 (12)0.0599 (16)0.0330 (12)−0.0004 (11)−0.0075 (10)0.0023 (11)
C120.0548 (13)0.0498 (15)0.0428 (14)−0.0073 (11)−0.0062 (10)0.0011 (12)
C130.0542 (13)0.0437 (14)0.0406 (13)−0.0031 (10)−0.0013 (10)0.0086 (10)
C140.0482 (12)0.0459 (13)0.0353 (12)0.0034 (10)−0.0036 (9)0.0062 (10)
O7B0.060 (3)0.071 (3)0.070 (3)−0.016 (2)−0.008 (2)0.033 (2)
O6B0.064 (3)0.092 (3)0.074 (4)0.010 (2)−0.020 (3)0.037 (3)
O10.0725 (11)0.0494 (10)0.0490 (10)−0.0047 (8)−0.0044 (8)0.0242 (8)
O20.0808 (12)0.0613 (12)0.0630 (11)−0.0209 (9)0.0007 (9)0.0152 (9)
O30.1297 (18)0.0999 (16)0.0415 (11)−0.0298 (13)−0.0012 (11)0.0073 (10)
O40.0848 (11)0.0577 (11)0.0489 (10)−0.0052 (9)−0.0095 (8)0.0257 (8)
N10.0565 (11)0.0520 (12)0.0454 (12)0.0023 (9)−0.0024 (9)0.0127 (10)
N20.0773 (14)0.0598 (15)0.0466 (12)−0.0077 (12)−0.0122 (10)0.0217 (11)
C10.0417 (11)0.0458 (13)0.0385 (12)0.0082 (9)0.0049 (9)0.0141 (10)
C20.0428 (11)0.0416 (12)0.0412 (12)0.0061 (9)0.0066 (9)0.0160 (10)
C30.0416 (11)0.0439 (13)0.0406 (12)0.0054 (9)0.0041 (9)0.0117 (10)
C40.0521 (12)0.0568 (15)0.0406 (13)0.0065 (11)0.0005 (10)0.0206 (12)
C50.0604 (14)0.0493 (15)0.0530 (15)−0.0013 (12)−0.0022 (11)0.0242 (12)
C60.0495 (13)0.0465 (14)0.0468 (14)0.0007 (10)−0.0010 (10)0.0137 (11)
C70.0494 (12)0.0520 (14)0.0424 (13)0.0063 (11)0.0028 (10)0.0158 (11)
O5—C91.330 (3)C8—C131.390 (3)
O6A—N31.203 (5)C8—C141.485 (3)
O6B—N31.214 (6)C8—C91.409 (3)
O7A—N31.268 (5)C9—C101.400 (3)
O7B—N31.220 (7)C10—C111.384 (3)
O8—C141.256 (3)C11—C121.364 (3)
O5—H5O0.8200C12—C131.373 (3)
O1—C21.331 (3)C11—H110.92 (2)
O2—N11.208 (3)C12—H121.00 (3)
O3—N11.215 (3)C13—H130.92 (2)
O4—C71.251 (3)C1—C71.487 (3)
O1—H1O0.8200C1—C21.408 (3)
N3—C101.462 (3)C1—C61.394 (3)
N4—C141.315 (3)C2—C31.405 (3)
N4—H4B0.91 (3)C3—C41.377 (3)
N4—H4A0.87 (3)C4—C51.362 (3)
N1—C31.459 (3)C5—C61.374 (3)
N2—C71.313 (3)C4—H40.90 (2)
N2—H2B0.93 (3)C5—H50.89 (2)
N2—H2A0.80 (3)C6—H60.91 (2)
C9—O5—H5O109.00O8—C14—N4120.4 (2)
C2—O1—H1O109.00O8—C14—C8119.73 (19)
O6A—N3—C10121.8 (3)C10—C11—H11120.5 (14)
O7A—N3—C10116.8 (3)C12—C11—H11119.2 (14)
O7B—N3—C10117.3 (3)C11—C12—H12122.5 (14)
O6B—N3—O7B124.6 (4)C13—C12—H12118.2 (14)
O6A—N3—O7A121.4 (4)C8—C13—H13117.7 (14)
O6B—N3—C10118.1 (3)C12—C13—H13120.4 (14)
C14—N4—H4A120.6 (17)C6—C1—C7122.08 (19)
H4A—N4—H4B116 (2)C2—C1—C6119.27 (19)
C14—N4—H4B123.0 (15)C2—C1—C7118.64 (19)
O2—N1—C3119.37 (18)O1—C2—C3120.55 (18)
O3—N1—C3117.86 (19)C1—C2—C3117.33 (19)
O2—N1—O3122.7 (2)O1—C2—C1122.09 (18)
H2A—N2—H2B120 (2)N1—C3—C2120.54 (18)
C7—N2—H2B117.6 (15)N1—C3—C4117.60 (19)
C7—N2—H2A122.1 (19)C2—C3—C4121.9 (2)
C9—C8—C13119.43 (18)C3—C4—C5120.2 (2)
C13—C8—C14122.27 (19)C4—C5—C6119.7 (2)
C9—C8—C14118.26 (18)C1—C6—C5121.6 (2)
O5—C9—C10120.59 (19)O4—C7—C1119.6 (2)
C8—C9—C10117.21 (19)N2—C7—C1120.3 (2)
O5—C9—C8122.19 (17)O4—C7—N2120.1 (2)
N3—C10—C11117.63 (19)C3—C4—H4120.7 (15)
N3—C10—C9120.55 (19)C5—C4—H4119.1 (14)
C9—C10—C11121.8 (2)C4—C5—H5121.6 (15)
C10—C11—C12120.3 (2)C6—C5—H5118.7 (15)
C11—C12—C13119.3 (2)C1—C6—H6118.7 (15)
C8—C13—C12122.0 (2)C5—C6—H6119.6 (15)
N4—C14—C8119.9 (2)
O6A—N3—C10—C9−17.2 (5)C9—C10—C11—C12−0.6 (3)
O6A—N3—C10—C11163.1 (4)N3—C10—C11—C12179.1 (2)
O7A—N3—C10—C9163.0 (4)C10—C11—C12—C131.2 (4)
O7A—N3—C10—C11−16.7 (4)C11—C12—C13—C8−0.2 (4)
O2—N1—C3—C2−30.7 (3)C6—C1—C2—O1−179.93 (18)
O2—N1—C3—C4150.2 (2)C6—C1—C2—C3−2.0 (3)
O3—N1—C3—C2151.1 (2)C7—C1—C2—O1−1.3 (3)
O3—N1—C3—C4−28.0 (3)C7—C1—C2—C3176.59 (19)
C13—C8—C9—C101.7 (3)C2—C1—C6—C51.0 (3)
C14—C8—C9—O5−0.7 (3)C7—C1—C6—C5−177.5 (2)
C13—C8—C9—O5−178.57 (19)C2—C1—C7—O4−0.5 (3)
C9—C8—C14—N4175.1 (2)C2—C1—C7—N2179.9 (2)
C13—C8—C14—O8172.1 (2)C6—C1—C7—O4178.1 (2)
C13—C8—C14—N4−7.1 (3)C6—C1—C7—N2−1.5 (3)
C14—C8—C13—C12−179.0 (2)O1—C2—C3—N10.1 (3)
C14—C8—C9—C10179.55 (18)O1—C2—C3—C4179.2 (2)
C9—C8—C13—C12−1.3 (3)C1—C2—C3—N1−177.82 (18)
C9—C8—C14—O8−5.6 (3)C1—C2—C3—C41.3 (3)
O5—C9—C10—N3−0.3 (3)N1—C3—C4—C5179.7 (2)
O5—C9—C10—C11179.5 (2)C2—C3—C4—C50.6 (3)
C8—C9—C10—N3179.46 (18)C3—C4—C5—C6−1.7 (4)
C8—C9—C10—C11−0.8 (3)C4—C5—C6—C10.9 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1O···O40.821.772.500 (2)148
N2—H2A···O6Ai0.80 (3)2.38 (3)3.142 (5)161 (3)
N2—H2B···O4ii0.93 (3)2.03 (3)2.966 (3)177 (2)
N4—H4A···O8iii0.87 (3)2.07 (3)2.929 (3)172 (2)
N4—H4B···O2iv0.91 (3)2.18 (3)3.084 (3)174 (2)
O5—H5O···O80.821.762.496 (2)148
C6—H6···O6Ai0.91 (2)2.40 (2)3.285 (6)163 (2)
C11—H11···O7Av0.92 (2)2.41 (2)3.221 (6)147 (2)
C11—H11···O7Avi0.92 (2)2.55 (2)2.997 (6)110.5 (17)
C13—H13···O2iv0.92 (2)2.39 (2)3.289 (3)165 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1O⋯O40.821.772.500 (2)148
N2—H2A⋯O6Ai0.80 (3)2.38 (3)3.142 (5)161 (3)
N2—H2B⋯O4ii0.93 (3)2.03 (3)2.966 (3)177 (2)
N4—H4A⋯O8iii0.87 (3)2.07 (3)2.929 (3)172 (2)
N4—H4B⋯O2iv0.91 (3)2.18 (3)3.084 (3)174 (2)
O5—H5O⋯O80.821.762.496 (2)148
C6—H6⋯O6Ai0.91 (2)2.40 (2)3.285 (6)163 (2)
C11—H11⋯O7Av0.92 (2)2.41 (2)3.221 (6)147 (2)
C11—H11⋯O7Avi0.92 (2)2.55 (2)2.997 (6)110.5 (17)
C13—H13⋯O2iv0.92 (2)2.39 (2)3.289 (3)165 (2)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  2 in total
  1 in total

1.  2-Hydr-oxy-5-nitro-benzamide.

Authors:  Abdul Rauf Raza; M Nawaz Tahir; Bushra Nisar; Mohammad Danish; Mohammad S Iqbal
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-28
  1 in total

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