Literature DB >> 21582888

1-[1-(Hydroxy-imino)eth-yl]-N-(2-methoxy-phen-yl)cyclo-propane-carboxamide.

Jun-Ling Wang1, Shuang-Ming Meng, Mao-Zhong Tian, Feng Feng.   

Abstract

The title compound, C(13)H(16)N(2)O(3), adopts an E configuration with respect to the C=N bond and an intra-molecular N-H⋯N hydrogen bond results in the formation of a six-membered ring. In the crystal, inter-molecular O-H⋯O n class="Chemical">hydrogen bonds link the mol-ecules into a chain propagating along the b axis. Very weak π-π stacking inter-actions [centroid-centroid distance = 4.18 (2) Å] may further consolidate the packing, forming a two-dimensional supra-molecular network.

Entities:  

Year:  2009        PMID: 21582888      PMCID: PMC2969475          DOI: 10.1107/S1600536809022260

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to cyclo­propane derivatives, see: Liu & Montgomery (2006 ▶); Ogoshi et al. (2006 ▶).

Experimental

Crystal data

C13H16N2O3 M = 248.28 Monoclinic, a = 16.062 (6) Å b = 5.483 (2) Å c = 14.250 (6) Å β = 100.055 (6)° V = 1235.7 (8) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.41 × 0.29 × 0.20 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1999 ▶) T min = 0.96, T max = 0.99 6430 measured reflections 2432 independent reflections 1520 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.073 wR(F 2) = 0.170 S = 1.09 2432 reflections 169 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.21 e Å−3 Δρmin = −0.20 e Å−3 Data collection: SMART (Bruker, 1999 ▶); cell refinement: SAINT (Bruker, 1999 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1008); molecular graphics: SHELXTL-Plus (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809022260/hb2995sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809022260/hb2995Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H16N2O3F(000) = 528
Mr = 248.28Dx = 1.335 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71069 Å
Hall symbol: -P 2ybcCell parameters from 2432 reflections
a = 16.062 (6) Åθ = 1.3–26.1°
b = 5.483 (2) ŵ = 0.10 mm1
c = 14.250 (6) ÅT = 293 K
β = 100.055 (6)°Block, colourless
V = 1235.7 (8) Å30.41 × 0.29 × 0.20 mm
Z = 4
Bruker SMART APEX CCD diffractometer2432 independent reflections
Radiation source: fine-focus sealed tube1520 reflections with I > 2σ(I)
graphiteRint = 0.044
ω scansθmax = 26.1°, θmin = 1.3°
Absorption correction: multi-scan (SADABS; Bruker, 1999)h = −9→19
Tmin = 0.96, Tmax = 0.99k = −6→6
6430 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.073Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.170H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.0648P)2 + 0.566P] where P = (Fo2 + 2Fc2)/3
2432 reflections(Δ/σ)max < 0.001
169 parametersΔρmax = 0.21 e Å3
2 restraintsΔρmin = −0.20 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3277 (2)−0.2371 (7)1.1123 (2)0.0577 (10)
H1A0.2878−0.22491.15500.087*
H1B0.3826−0.18741.14470.087*
H1C0.3303−0.40291.09140.087*
C20.3509 (2)−0.0767 (6)0.9634 (2)0.0428 (8)
C30.4169 (2)−0.2323 (6)0.9573 (3)0.0558 (10)
H30.4305−0.35611.00200.067*
C40.4628 (2)−0.2049 (7)0.8849 (3)0.0578 (10)
H40.5075−0.30990.88120.069*
C50.4432 (2)−0.0246 (6)0.8182 (2)0.0525 (9)
H50.4745−0.00760.76960.063*
C60.3768 (2)0.1321 (6)0.8233 (2)0.0468 (8)
H60.36370.25480.77810.056*
C70.3297 (2)0.1078 (5)0.8954 (2)0.0378 (7)
C80.21464 (19)0.4042 (5)0.8447 (2)0.0365 (7)
C90.14682 (19)0.5534 (5)0.8782 (2)0.0356 (7)
C100.0684 (2)0.5852 (6)0.8000 (2)0.0516 (9)
H10A0.06710.49750.74060.062*
H10B0.01390.60220.81980.062*
C110.1292 (2)0.7886 (6)0.8211 (2)0.0500 (9)
H11A0.11160.92990.85370.060*
H11B0.16470.82520.77450.060*
C120.13045 (19)0.5525 (5)0.9782 (2)0.0366 (7)
C130.0787 (2)0.7537 (6)1.0116 (3)0.0559 (10)
H13A0.07400.72631.07700.084*
H13B0.02330.75530.97310.084*
H13C0.10590.90761.00590.084*
N20.16185 (17)0.3782 (4)1.03227 (17)0.0405 (7)
O10.30181 (15)−0.0837 (4)1.03230 (16)0.0589 (7)
O20.22453 (15)0.4164 (4)0.76124 (15)0.0523 (6)
O30.14111 (17)0.3914 (4)1.12368 (16)0.0580 (7)
H3O0.176 (2)0.300 (7)1.159 (3)0.087*
N10.26309 (17)0.2616 (4)0.90914 (18)0.0392 (7)
H1N0.2470 (19)0.254 (6)0.9632 (16)0.047*
U11U22U33U12U13U23
C10.067 (3)0.060 (2)0.048 (2)0.008 (2)0.0146 (18)0.0174 (18)
C20.051 (2)0.0407 (17)0.0392 (18)0.0018 (16)0.0135 (15)−0.0005 (15)
C30.061 (2)0.050 (2)0.057 (2)0.0181 (19)0.0139 (19)0.0073 (17)
C40.058 (2)0.056 (2)0.064 (3)0.0165 (19)0.0211 (19)−0.0074 (19)
C50.055 (2)0.059 (2)0.049 (2)0.0000 (19)0.0237 (17)−0.0093 (18)
C60.054 (2)0.0429 (18)0.046 (2)−0.0002 (17)0.0155 (17)−0.0008 (15)
C70.045 (2)0.0327 (16)0.0372 (17)−0.0028 (15)0.0115 (14)−0.0061 (14)
C80.046 (2)0.0311 (15)0.0317 (17)−0.0094 (15)0.0058 (14)−0.0012 (13)
C90.0413 (18)0.0258 (14)0.0394 (17)−0.0050 (14)0.0064 (14)0.0022 (13)
C100.049 (2)0.053 (2)0.050 (2)0.0036 (18)0.0013 (16)0.0030 (17)
C110.065 (2)0.0338 (17)0.051 (2)0.0036 (17)0.0092 (18)0.0139 (15)
C120.0402 (19)0.0257 (14)0.0444 (18)−0.0048 (14)0.0089 (14)−0.0011 (13)
C130.068 (3)0.0383 (19)0.067 (3)0.0096 (18)0.026 (2)−0.0046 (17)
N20.0562 (18)0.0345 (14)0.0336 (14)0.0018 (13)0.0154 (12)0.0017 (12)
O10.0641 (17)0.0655 (16)0.0524 (15)0.0226 (13)0.0245 (12)0.0235 (12)
O20.0684 (16)0.0570 (15)0.0329 (13)0.0035 (13)0.0128 (11)0.0033 (11)
O30.0794 (19)0.0602 (16)0.0402 (14)0.0181 (14)0.0264 (12)0.0069 (11)
N10.0509 (17)0.0354 (13)0.0334 (15)0.0070 (13)0.0133 (13)0.0018 (12)
C1—O11.420 (4)C8—C91.505 (4)
C1—H1A0.9600C9—C121.494 (4)
C1—H1B0.9600C9—C111.525 (4)
C1—H1C0.9600C9—C101.540 (4)
C2—O11.362 (4)C10—C111.478 (5)
C2—C31.376 (4)C10—H10A0.9700
C2—C71.402 (4)C10—H10B0.9700
C3—C41.377 (5)C11—H11A0.9700
C3—H30.9300C11—H11B0.9700
C4—C51.369 (5)C12—N21.275 (4)
C4—H40.9300C12—C131.507 (4)
C5—C61.380 (5)C13—H13A0.9600
C5—H50.9300C13—H13B0.9600
C6—C71.385 (4)C13—H13C0.9600
C6—H60.9300N2—O31.402 (3)
C7—N11.402 (4)O3—H3O0.85 (4)
C8—O21.229 (3)N1—H1N0.856 (17)
C8—N11.345 (4)
O1—C1—H1A109.5C12—C9—C10115.7 (3)
O1—C1—H1B109.5C8—C9—C10112.2 (3)
H1A—C1—H1B109.5C11—C9—C1057.7 (2)
O1—C1—H1C109.5C11—C10—C960.6 (2)
H1A—C1—H1C109.5C11—C10—H10A117.7
H1B—C1—H1C109.5C9—C10—H10A117.7
O1—C2—C3125.3 (3)C11—C10—H10B117.7
O1—C2—C7114.7 (3)C9—C10—H10B117.7
C3—C2—C7120.0 (3)H10A—C10—H10B114.8
C2—C3—C4120.0 (3)C10—C11—C961.7 (2)
C2—C3—H3120.0C10—C11—H11A117.6
C4—C3—H3120.0C9—C11—H11A117.6
C5—C4—C3120.7 (3)C10—C11—H11B117.6
C5—C4—H4119.6C9—C11—H11B117.6
C3—C4—H4119.6H11A—C11—H11B114.7
C4—C5—C6119.9 (3)N2—C12—C9117.5 (3)
C4—C5—H5120.0N2—C12—C13122.7 (3)
C6—C5—H5120.0C9—C12—C13119.8 (3)
C5—C6—C7120.4 (3)C12—C13—H13A109.5
C5—C6—H6119.8C12—C13—H13B109.5
C7—C6—H6119.8H13A—C13—H13B109.5
C6—C7—C2119.0 (3)C12—C13—H13C109.5
C6—C7—N1125.1 (3)H13A—C13—H13C109.5
C2—C7—N1115.9 (3)H13B—C13—H13C109.5
O2—C8—N1122.3 (3)C12—N2—O3112.9 (2)
O2—C8—C9120.0 (3)C2—O1—C1118.0 (3)
N1—C8—C9117.7 (2)N2—O3—H3O107 (3)
C12—C9—C8123.9 (3)C8—N1—C7128.2 (3)
C12—C9—C11117.6 (3)C8—N1—H1N114 (2)
C8—C9—C11111.6 (3)C7—N1—H1N117 (2)
O1—C2—C3—C4−179.1 (3)C8—C9—C10—C11−102.3 (3)
C7—C2—C3—C40.8 (5)C12—C9—C11—C10−104.3 (3)
C2—C3—C4—C5−0.4 (6)C8—C9—C11—C10103.3 (3)
C3—C4—C5—C60.1 (6)C8—C9—C12—N2−16.4 (4)
C4—C5—C6—C7−0.2 (5)C11—C9—C12—N2−165.1 (3)
C5—C6—C7—C20.6 (5)C10—C9—C12—N2129.6 (3)
C5—C6—C7—N1177.7 (3)C8—C9—C12—C13163.4 (3)
O1—C2—C7—C6179.0 (3)C11—C9—C12—C1314.7 (4)
C3—C2—C7—C6−0.9 (5)C10—C9—C12—C13−50.6 (4)
O1—C2—C7—N11.7 (4)C9—C12—N2—O3−178.6 (2)
C3—C2—C7—N1−178.2 (3)C13—C12—N2—O31.7 (4)
O2—C8—C9—C12−179.5 (3)C3—C2—O1—C110.3 (5)
N1—C8—C9—C120.1 (4)C7—C2—O1—C1−169.6 (3)
O2—C8—C9—C11−29.2 (4)O2—C8—N1—C7−0.4 (5)
N1—C8—C9—C11150.4 (3)C9—C8—N1—C7−179.9 (3)
O2—C8—C9—C1033.5 (4)C6—C7—N1—C823.1 (5)
N1—C8—C9—C10−146.9 (3)C2—C7—N1—C8−159.8 (3)
C12—C9—C10—C11107.8 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1N···N20.86 (2)1.94 (2)2.670 (3)142 (3)
O3—H3O···O2i0.85 (4)1.93 (2)2.751 (3)162 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯N20.856 (17)1.94 (2)2.670 (3)142 (3)
O3—H3O⋯O2i0.85 (4)1.93 (2)2.751 (3)162 (4)

Symmetry code: (i) .

  3 in total

1.  Dimerization of cyclopropyl ketones and crossed reactions of cyclopropyl ketones with enones as an entry to five-membered rings.

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Authors:  Sensuke Ogoshi; Midue Nagata; Hideo Kurosawa
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3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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