Literature DB >> 21582779

(Z)-1-[(3-Cyano-phen-yl)iminiometh-yl]-2-naphtholate.

Yong-Feng Zhao1, Jin-Ping Xiong, Yu Zuo.   

Abstract

The title compound, C(18)H(12)N(2)O, crystallizes in a zwitterionic form. The dihedral angle between the planes of the benzene ring and naphthalene ring system is 13.95 (5)°. An intra-molecular N-H⋯O inter-action results in the formation of a planar six-membered ring, which is oriented at dihedral angles of 13.50 (4) and 4.49 (4)° with respect to the benzene ring and naphthalene ring system, respectively. In the crystal structure, inter-molecular C-H⋯O and C-H⋯N inter-actions link the mol-ecules into a two-dimensional network. π-π contacts between the naphthalene systems [centroid-centroid distance = 3.974 (1) Å] may further stabilize the structure.

Entities:  

Year:  2009        PMID: 21582779      PMCID: PMC2969241          DOI: 10.1107/S1600536809020224

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of Schiff base compounds, see: Dao et al. (2000 ▶); Sriram et al. (2006 ▶). For the role played by Schiff base compounds in coordination chemistry related to magnetism, see: Chen et al. (2008 ▶); Weber et al. (2007 ▶). For related structures, see: Elmali et al. (2001 ▶); Yüce et al. (2006 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C18H12N2O M = 272.30 Triclinic, a = 7.8943 (16) Å b = 9.1356 (18) Å c = 9.4933 (19) Å α = 83.97 (3)° β = 84.41 (3)° γ = 82.50 (3)° V = 672.6 (2) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 294 K 0.20 × 0.20 × 0.20 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.976, T max = 0.983 6177 measured reflections 2628 independent reflections 1146 reflections with I > 2σ(I) R int = 0.061

Refinement

R[F 2 > 2σ(F 2)] = 0.067 wR(F 2) = 0.195 S = 0.94 2628 reflections 190 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97 and PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809020224/hk2700sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809020224/hk2700Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H12N2OZ = 2
Mr = 272.30F(000) = 284
Triclinic, P1Dx = 1.345 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.8943 (16) ÅCell parameters from 4320 reflections
b = 9.1356 (18) Åθ = 3.2–27.5°
c = 9.4933 (19) ŵ = 0.09 mm1
α = 83.97 (3)°T = 294 K
β = 84.41 (3)°Prism, yellow
γ = 82.50 (3)°0.20 × 0.20 × 0.20 mm
V = 672.6 (2) Å3
Rigaku SCXmini diffractometer2628 independent reflections
Radiation source: fine-focus sealed tube1146 reflections with I > 2σ(I)
graphiteRint = 0.061
Detector resolution: 13.6612 pixels mm-1θmax = 26.0°, θmin = 3.2°
ω scansh = −9→9
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −11→11
Tmin = 0.976, Tmax = 0.983l = −11→11
6177 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.067Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.195H-atom parameters constrained
S = 0.94w = 1/[σ2(Fo2) + (0.0919P)2] where P = (Fo2 + 2Fc2)/3
2628 reflections(Δ/σ)max = 0.016
190 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.9002 (3)0.6505 (3)0.2062 (2)0.0608 (8)
N10.7833 (3)0.3998 (3)0.2569 (3)0.0439 (7)
H1A0.82700.46520.19740.053*
N20.4237 (5)−0.1364 (4)0.3557 (4)0.0852 (12)
C10.7515 (4)0.2689 (4)0.2031 (3)0.0421 (8)
C20.6494 (4)0.1697 (3)0.2774 (3)0.0452 (9)
H2A0.59840.18760.36750.054*
C30.6234 (4)0.0444 (4)0.2177 (4)0.0482 (9)
C40.6973 (5)0.0157 (4)0.0832 (4)0.0609 (11)
H4A0.6799−0.06950.04370.073*
C50.7971 (5)0.1160 (4)0.0093 (4)0.0654 (11)
H5A0.84670.0985−0.08120.079*
C60.8240 (4)0.2410 (4)0.0675 (3)0.0514 (10)
H6A0.89140.30770.01600.062*
C70.5115 (5)−0.0569 (4)0.2954 (4)0.0611 (11)
C80.7525 (4)0.4310 (3)0.3886 (3)0.0408 (8)
H8A0.70160.36300.45360.049*
C90.7916 (4)0.5615 (3)0.4381 (3)0.0405 (8)
C100.8725 (4)0.6662 (3)0.3400 (4)0.0433 (9)
C110.9241 (5)0.7903 (4)0.3945 (4)0.0576 (11)
H11A0.97890.85820.33230.069*
C120.8969 (5)0.8139 (4)0.5334 (4)0.0577 (10)
H12A0.93340.89680.56450.069*
C130.8122 (4)0.7125 (3)0.6335 (4)0.0424 (9)
C140.7876 (4)0.7374 (4)0.7790 (4)0.0533 (10)
H14A0.82610.81990.80910.064*
C150.7077 (4)0.6415 (4)0.8761 (4)0.0554 (10)
H15A0.69080.65900.97150.067*
C160.6524 (4)0.5185 (4)0.8304 (4)0.0509 (9)
H16A0.59810.45290.89570.061*
C170.6766 (4)0.4920 (4)0.6902 (3)0.0483 (9)
H17A0.63740.40870.66230.058*
C180.7585 (4)0.5863 (3)0.5875 (3)0.0367 (8)
U11U22U33U12U13U23
O10.083 (2)0.0657 (17)0.0347 (15)−0.0255 (14)0.0047 (13)0.0010 (12)
N10.0520 (19)0.0430 (17)0.0370 (17)−0.0146 (13)0.0051 (13)−0.0025 (14)
N20.120 (3)0.064 (2)0.076 (3)−0.043 (2)0.011 (2)−0.010 (2)
C10.043 (2)0.044 (2)0.040 (2)−0.0072 (16)−0.0024 (16)−0.0059 (17)
C20.057 (2)0.044 (2)0.035 (2)−0.0102 (18)0.0011 (16)−0.0075 (16)
C30.057 (2)0.042 (2)0.048 (2)−0.0068 (18)−0.0062 (18)−0.0107 (17)
C40.079 (3)0.055 (2)0.051 (3)−0.008 (2)−0.004 (2)−0.018 (2)
C50.083 (3)0.069 (3)0.047 (2)−0.018 (2)0.010 (2)−0.020 (2)
C60.053 (2)0.061 (2)0.040 (2)−0.0129 (19)0.0046 (17)−0.0033 (18)
C70.080 (3)0.051 (2)0.054 (3)−0.014 (2)−0.001 (2)−0.011 (2)
C80.040 (2)0.044 (2)0.038 (2)−0.0066 (16)0.0015 (15)−0.0029 (16)
C90.039 (2)0.041 (2)0.041 (2)−0.0065 (16)−0.0007 (15)0.0003 (16)
C100.052 (2)0.0366 (19)0.042 (2)−0.0093 (16)−0.0054 (17)−0.0010 (16)
C110.070 (3)0.047 (2)0.058 (3)−0.0253 (19)−0.001 (2)0.003 (2)
C120.068 (3)0.050 (2)0.060 (3)−0.022 (2)−0.003 (2)−0.007 (2)
C130.041 (2)0.042 (2)0.046 (2)−0.0029 (16)−0.0066 (16)−0.0074 (17)
C140.053 (2)0.055 (2)0.056 (3)−0.0066 (19)−0.0103 (19)−0.020 (2)
C150.058 (2)0.064 (3)0.043 (2)−0.003 (2)0.0004 (18)−0.009 (2)
C160.057 (2)0.051 (2)0.043 (2)−0.0085 (18)0.0046 (17)−0.0013 (18)
C170.052 (2)0.045 (2)0.048 (2)−0.0097 (18)0.0029 (17)−0.0074 (18)
C180.0366 (19)0.0372 (19)0.0377 (19)−0.0076 (15)−0.0012 (14)−0.0074 (15)
O1—C101.287 (4)C9—C101.431 (4)
N1—C11.409 (4)C9—C181.453 (4)
N1—C81.304 (4)C11—C101.416 (4)
N1—H1A0.8600C11—C121.350 (5)
N2—C71.142 (4)C11—H11A0.9300
C2—C11.384 (4)C12—H12A0.9300
C2—C31.376 (4)C13—C121.435 (4)
C2—H2A0.9300C13—C141.414 (4)
C4—C31.387 (5)C13—C181.403 (4)
C4—C51.377 (5)C14—H14A0.9300
C4—H4A0.9300C15—C141.370 (4)
C5—H5A0.9300C15—C161.382 (5)
C6—C11.392 (4)C15—H15A0.9300
C6—C51.369 (5)C16—H16A0.9300
C6—H6A0.9300C17—C161.369 (4)
C7—C31.458 (5)C17—C181.399 (4)
C8—H8A0.9300C17—H17A0.9300
C9—C81.406 (4)
C1—N1—H1A117.0O1—C10—C9122.5 (3)
C8—N1—C1126.0 (3)O1—C10—C11119.7 (3)
C8—N1—H1A117.0C11—C10—C9117.8 (3)
C2—C1—N1123.1 (3)C10—C11—H11A118.7
C2—C1—C6119.0 (3)C12—C11—C10122.6 (3)
C6—C1—N1117.9 (3)C12—C11—H11A118.7
C1—C2—H2A120.1C11—C12—C13120.8 (3)
C3—C2—C1119.8 (3)C11—C12—H12A119.6
C3—C2—H2A120.1C13—C12—H12A119.6
C2—C3—C4121.1 (3)C14—C13—C12120.0 (3)
C2—C3—C7119.2 (3)C18—C13—C12119.9 (3)
C4—C3—C7119.6 (3)C18—C13—C14120.0 (3)
C3—C4—H4A120.7C13—C14—H14A119.6
C5—C4—C3118.6 (4)C15—C14—C13120.8 (3)
C5—C4—H4A120.7C15—C14—H14A119.6
C4—C5—H5A119.6C14—C15—C16119.1 (3)
C6—C5—C4120.9 (4)C14—C15—H15A120.5
C6—C5—H5A119.6C16—C15—H15A120.5
C1—C6—H6A119.7C15—C16—H16A119.6
C5—C6—C1120.5 (3)C17—C16—C15120.8 (3)
C5—C6—H6A119.7C17—C16—H16A119.6
N2—C7—C3179.7 (4)C16—C17—C18122.1 (3)
N1—C8—C9123.9 (3)C16—C17—H17A119.0
N1—C8—H8A118.0C18—C17—H17A119.0
C9—C8—H8A118.0C13—C18—C9118.5 (3)
C8—C9—C10118.8 (3)C17—C18—C13117.1 (3)
C8—C9—C18120.7 (3)C17—C18—C9124.4 (3)
C10—C9—C18120.4 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O10.861.872.562 (3)136
C2—H2A···N2i0.932.613.463 (3)152
C6—H6A···O1ii0.932.573.376 (3)145
C17—H17A···N2i0.932.623.522 (3)163
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O10.861.872.562 (3)136
C2—H2A⋯N2i0.932.613.463 (3)152
C6—H6A⋯O1ii0.932.573.376 (3)145
C17—H17A⋯N2i0.932.623.522 (3)163

Symmetry codes: (i) ; (ii) .

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