| Literature DB >> 21582751 |
Abstract
In the title coordination polymer, {[AgNd(C(5)H(3)N(2)O(2))(2)(C(2)O(4))]·H(2)O}(n), the Nd(III) atom is coordinated in a distorted monocapped square-anti-prismatic geometry by two O and two N atoms of two N,O-bidentate pyrazine-2-carboxyl-ate (2-pzc) ligands, four O atoms of two bidentate oxalate ligands, and one O atom of a monodentate carboxyl-ate group of a 2-pzc ligand. The Ag(I) ion is coordinated in a distorted tetra-hedral geometry by two N atoms from two monodentate 2-pzc ligands, one O atom from one monodentate oxalate ligand and one O atom of a bridging carboxyl-ate group of a 2-pzc ligand. The oxalate anions link neighbouring neodymium(III) metal centres into Nd-oxalate chains, which are inter-connected by Ag(2-pyz)(2) units, forming a three-dimensional polymeric framework. Inter-molecular O-H⋯O and C-H⋯O hydrogen bonds are observed in the crystal structure.Entities:
Year: 2009 PMID: 21582751 PMCID: PMC2969187 DOI: 10.1107/S160053680902128X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [AgNd(C5H3N2O2)2(C2O4)]·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2433 reflections |
| θ = 1.4–28.0° | |
| µ = 4.72 mm−1 | |
| β = 95.47 (3)° | Block, colourless |
| 0.32 × 0.26 × 0.21 mm | |
| Rigaku/MSC Mercury CCD diffractometer | 2747 independent reflections |
| Radiation source: fine-focus sealed tube | 1946 reflections with |
| graphite | |
| ω scans | θmax = 25.2°, θmin = 3.3° |
| Absorption correction: multi-scan (REQAB; Jacobson, 1998) | |
| 12072 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2747 reflections | (Δ/σ)max = 0.028 |
| 244 parameters | Δρmax = 1.59 e Å−3 |
| 3 restraints | Δρmin = −1.77 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ag1 | 1.15900 (9) | 0.92327 (6) | 0.60684 (11) | 0.0369 (3) | |
| C1 | 0.9481 (10) | 0.9114 (6) | 0.0822 (13) | 0.026 (3) | |
| N1 | 0.8209 (8) | 0.9101 (5) | 0.0274 (10) | 0.027 (2) | |
| Nd1 | 0.64656 (5) | 0.89514 (3) | 0.26047 (7) | 0.02128 (18) | |
| O1 | 0.8807 (6) | 0.9057 (5) | 0.3541 (8) | 0.0298 (19) | |
| O1W | 0.9655 (10) | 0.7408 (7) | 0.0126 (18) | 0.099 (5) | |
| H1W | 0.9199 | 0.7431 | 0.0945 | 0.149* | |
| H2W | 0.9262 | 0.7594 | −0.0734 | 0.149* | |
| C2 | 1.0449 (10) | 0.9146 (6) | −0.0258 (13) | 0.029 (3) | |
| H2 | 1.1337 | 0.9136 | 0.0168 | 0.035* | |
| N2 | 1.0149 (9) | 0.9190 (5) | −0.1900 (11) | 0.030 (2) | |
| O2 | 1.0988 (7) | 0.9106 (5) | 0.3253 (8) | 0.035 (2) | |
| C3 | 0.8869 (11) | 0.9176 (7) | −0.2454 (13) | 0.037 (3) | |
| H3 | 0.8622 | 0.9195 | −0.3598 | 0.045* | |
| O3 | 1.6618 (7) | 0.8233 (4) | 0.5173 (9) | 0.034 (2) | |
| C4 | 0.7896 (11) | 0.9134 (7) | −0.1356 (12) | 0.034 (3) | |
| H4 | 0.7006 | 0.9130 | −0.1775 | 0.041* | |
| O4 | 1.7098 (7) | 0.7193 (4) | 0.6421 (10) | 0.0317 (18) | |
| C5 | 0.9806 (10) | 0.9093 (6) | 0.2720 (13) | 0.027 (3) | |
| O5 | 0.5044 (7) | 0.9079 (4) | −0.0030 (9) | 0.0309 (18) | |
| O6 | 0.3693 (7) | 0.9833 (4) | −0.1510 (9) | 0.0304 (19) | |
| O7 | 0.5658 (7) | 1.0571 (4) | 0.6552 (9) | 0.0274 (18) | |
| O8 | 0.6685 (7) | 0.9827 (4) | 0.4928 (8) | 0.0270 (18) | |
| N10 | 1.2894 (9) | 0.8232 (6) | 0.6898 (12) | 0.039 (3) | |
| C11 | 0.4622 (10) | 0.9689 (6) | −0.0439 (13) | 0.026 (3) | |
| N11 | 1.4588 (8) | 0.7064 (5) | 0.7235 (10) | 0.024 (2) | |
| C12 | 0.5689 (10) | 1.0120 (6) | 0.5441 (11) | 0.022 (2) | |
| C6 | 1.4972 (10) | 0.7674 (6) | 0.6640 (13) | 0.027 (3) | |
| C7 | 1.4155 (11) | 0.8253 (6) | 0.6552 (14) | 0.031 (3) | |
| H7 | 1.4498 | 0.8685 | 0.6234 | 0.037* | |
| C8 | 1.2491 (11) | 0.7609 (6) | 0.7402 (15) | 0.034 (3) | |
| H8 | 1.1617 | 0.7560 | 0.7654 | 0.041* | |
| C9 | 1.3340 (11) | 0.7018 (7) | 0.7569 (14) | 0.033 (3) | |
| H9 | 1.3016 | 0.6587 | 0.7922 | 0.040* | |
| C10 | 1.6348 (11) | 0.7698 (7) | 0.6033 (13) | 0.030 (3) |
| Ag1 | 0.0338 (5) | 0.0520 (7) | 0.0262 (4) | 0.0081 (4) | 0.0096 (4) | 0.0043 (4) |
| C1 | 0.028 (6) | 0.024 (7) | 0.026 (6) | −0.007 (5) | 0.006 (5) | −0.004 (5) |
| N1 | 0.028 (5) | 0.035 (6) | 0.018 (4) | −0.008 (4) | 0.002 (4) | 0.001 (4) |
| Nd1 | 0.0222 (3) | 0.0239 (3) | 0.0182 (3) | 0.0008 (3) | 0.0041 (2) | −0.0008 (3) |
| O1 | 0.009 (3) | 0.063 (6) | 0.017 (3) | −0.001 (4) | 0.001 (3) | 0.002 (4) |
| O1W | 0.052 (7) | 0.092 (11) | 0.155 (12) | 0.000 (6) | 0.020 (7) | −0.042 (9) |
| C2 | 0.019 (5) | 0.040 (8) | 0.028 (6) | 0.009 (5) | 0.003 (4) | 0.009 (5) |
| N2 | 0.032 (5) | 0.037 (6) | 0.022 (5) | −0.001 (4) | 0.008 (4) | 0.004 (4) |
| O2 | 0.021 (4) | 0.066 (7) | 0.017 (4) | 0.004 (4) | −0.004 (3) | −0.006 (4) |
| C3 | 0.033 (7) | 0.064 (10) | 0.014 (5) | 0.016 (6) | −0.003 (5) | −0.007 (5) |
| O3 | 0.036 (5) | 0.040 (6) | 0.027 (4) | −0.009 (4) | 0.005 (3) | 0.015 (4) |
| C4 | 0.036 (7) | 0.055 (9) | 0.012 (5) | −0.002 (6) | 0.007 (5) | −0.007 (5) |
| O4 | 0.034 (4) | 0.015 (4) | 0.048 (5) | −0.001 (3) | 0.013 (4) | 0.008 (4) |
| C5 | 0.027 (6) | 0.029 (7) | 0.025 (5) | −0.008 (5) | 0.010 (5) | 0.006 (5) |
| O5 | 0.039 (5) | 0.029 (5) | 0.025 (4) | −0.004 (4) | 0.000 (3) | 0.003 (4) |
| O6 | 0.022 (4) | 0.033 (5) | 0.035 (4) | 0.005 (3) | −0.007 (3) | 0.002 (4) |
| O7 | 0.024 (4) | 0.033 (5) | 0.024 (4) | −0.001 (3) | 0.000 (3) | −0.008 (4) |
| O8 | 0.026 (4) | 0.034 (5) | 0.021 (4) | 0.007 (3) | 0.006 (3) | −0.007 (3) |
| N10 | 0.029 (5) | 0.043 (7) | 0.043 (6) | 0.004 (5) | −0.001 (5) | 0.004 (5) |
| C11 | 0.024 (6) | 0.028 (7) | 0.027 (6) | 0.002 (5) | 0.003 (5) | 0.008 (5) |
| N11 | 0.018 (4) | 0.027 (6) | 0.029 (5) | 0.000 (4) | 0.010 (4) | 0.001 (4) |
| C12 | 0.034 (6) | 0.020 (6) | 0.012 (5) | 0.000 (5) | 0.003 (4) | −0.012 (4) |
| C6 | 0.026 (6) | 0.032 (7) | 0.023 (5) | 0.000 (5) | 0.002 (4) | 0.013 (5) |
| C7 | 0.034 (7) | 0.016 (7) | 0.043 (7) | −0.001 (5) | 0.003 (5) | 0.002 (5) |
| C8 | 0.033 (6) | 0.022 (7) | 0.050 (7) | −0.004 (5) | 0.019 (6) | 0.011 (6) |
| C9 | 0.038 (7) | 0.029 (7) | 0.032 (6) | −0.004 (5) | 0.006 (5) | 0.011 (5) |
| C10 | 0.044 (7) | 0.029 (8) | 0.019 (5) | −0.007 (6) | 0.010 (5) | −0.004 (5) |
| Ag1—N2i | 2.291 (9) | C3—H3 | 0.9300 |
| Ag1—O2 | 2.299 (7) | O3—C10 | 1.267 (13) |
| Ag1—N10 | 2.360 (10) | O3—Nd1vii | 2.461 (7) |
| C1—N1 | 1.320 (13) | C4—H4 | 0.9300 |
| C1—C2 | 1.370 (14) | O4—C10 | 1.240 (14) |
| C1—C5 | 1.530 (14) | O4—Nd1viii | 2.465 (7) |
| N1—C4 | 1.319 (13) | O5—C11 | 1.259 (13) |
| N1—Nd1 | 2.707 (8) | O6—C11 | 1.242 (12) |
| Nd1—O1 | 2.423 (6) | O6—Nd1ii | 2.455 (8) |
| Nd1—O6ii | 2.455 (8) | O7—C12 | 1.235 (11) |
| Nd1—O5 | 2.456 (7) | O7—Nd1v | 2.482 (7) |
| Nd1—O3iii | 2.461 (7) | O8—C12 | 1.252 (12) |
| Nd1—O4iv | 2.465 (8) | N10—C8 | 1.319 (15) |
| Nd1—O7v | 2.482 (7) | N10—C7 | 1.332 (14) |
| Nd1—O8 | 2.486 (7) | C11—C11ii | 1.53 (2) |
| Nd1—N11iv | 2.692 (9) | N11—C9 | 1.317 (13) |
| O1—C5 | 1.260 (12) | N11—C6 | 1.318 (14) |
| O1W—H1W | 0.8400 | N11—Nd1viii | 2.692 (9) |
| O1W—H2W | 0.8405 | C12—C12v | 1.57 (2) |
| C2—N2 | 1.328 (13) | C6—C7 | 1.367 (15) |
| C2—H2 | 0.9300 | C6—C10 | 1.517 (15) |
| N2—C3 | 1.329 (13) | C7—H7 | 0.9300 |
| N2—Ag1vi | 2.291 (9) | C8—C9 | 1.406 (16) |
| O2—C5 | 1.231 (12) | C8—H8 | 0.9300 |
| C3—C4 | 1.385 (15) | C9—H9 | 0.9300 |
| N2i—Ag1—O2 | 124.8 (3) | N2—C2—H2 | 119.2 |
| N2i—Ag1—N10 | 98.4 (3) | C1—C2—H2 | 119.2 |
| O2—Ag1—N10 | 106.5 (3) | C2—N2—C3 | 117.0 (9) |
| N1—C1—C2 | 121.5 (10) | C2—N2—Ag1vi | 127.6 (7) |
| N1—C1—C5 | 116.3 (9) | C3—N2—Ag1vi | 115.3 (7) |
| C2—C1—C5 | 122.3 (9) | C5—O2—Ag1 | 120.1 (7) |
| C1—N1—C4 | 117.7 (9) | N2—C3—C4 | 121.1 (10) |
| C1—N1—Nd1 | 116.7 (6) | N2—C3—H3 | 119.5 |
| C4—N1—Nd1 | 125.5 (7) | C4—C3—H3 | 119.5 |
| O1—Nd1—O6ii | 93.6 (3) | C10—O3—Nd1vii | 153.6 (7) |
| O1—Nd1—O5 | 137.2 (2) | N1—C4—C3 | 121.1 (10) |
| O6ii—Nd1—O5 | 65.6 (2) | N1—C4—H4 | 119.4 |
| O1—Nd1—O3iii | 78.7 (2) | C3—C4—H4 | 119.4 |
| O6ii—Nd1—O3iii | 144.2 (3) | C10—O4—Nd1viii | 126.5 (7) |
| O5—Nd1—O3iii | 139.7 (3) | O2—C5—O1 | 128.3 (10) |
| O1—Nd1—O4iv | 84.8 (3) | O2—C5—C1 | 117.1 (9) |
| O6ii—Nd1—O4iv | 133.5 (3) | O1—C5—C1 | 114.6 (9) |
| O5—Nd1—O4iv | 84.6 (3) | C11—O5—Nd1 | 118.1 (7) |
| O3iii—Nd1—O4iv | 81.1 (3) | C11—O6—Nd1ii | 118.1 (7) |
| O1—Nd1—O7v | 136.9 (2) | C12—O7—Nd1v | 122.0 (6) |
| O6ii—Nd1—O7v | 74.4 (2) | C12—O8—Nd1 | 121.6 (6) |
| O5—Nd1—O7v | 75.5 (2) | C8—N10—C7 | 114.8 (10) |
| O3iii—Nd1—O7v | 87.6 (3) | C8—N10—Ag1 | 128.1 (8) |
| O4iv—Nd1—O7v | 133.3 (2) | C7—N10—Ag1 | 116.0 (8) |
| O1—Nd1—O8 | 72.4 (2) | O6—C11—O5 | 126.5 (10) |
| O6ii—Nd1—O8 | 69.4 (2) | O6—C11—C11ii | 117.6 (13) |
| O5—Nd1—O8 | 125.8 (3) | O5—C11—C11ii | 115.8 (11) |
| O3iii—Nd1—O8 | 75.0 (3) | C9—N11—C6 | 116.9 (9) |
| O4iv—Nd1—O8 | 149.6 (2) | C9—N11—Nd1viii | 127.6 (7) |
| O7v—Nd1—O8 | 64.6 (2) | C6—N11—Nd1viii | 115.5 (6) |
| O1—Nd1—N11iv | 138.7 (3) | O7—C12—O8 | 128.2 (10) |
| O6ii—Nd1—N11iv | 127.1 (2) | O7—C12—C12v | 116.3 (11) |
| O5—Nd1—N11iv | 68.0 (3) | O8—C12—C12v | 115.5 (10) |
| O3iii—Nd1—N11iv | 71.9 (3) | N11—C6—C7 | 121.2 (10) |
| O4iv—Nd1—N11iv | 62.7 (3) | N11—C6—C10 | 117.0 (10) |
| O7v—Nd1—N11iv | 70.6 (3) | C7—C6—C10 | 121.9 (10) |
| O8—Nd1—N11iv | 124.5 (2) | N10—C7—C6 | 123.6 (11) |
| O1—Nd1—N1 | 61.6 (2) | N10—C7—H7 | 118.2 |
| O6ii—Nd1—N1 | 71.3 (3) | C6—C7—H7 | 118.2 |
| O5—Nd1—N1 | 76.1 (2) | N10—C8—C9 | 122.1 (11) |
| O3iii—Nd1—N1 | 130.2 (3) | N10—C8—H8 | 118.9 |
| O4iv—Nd1—N1 | 67.3 (3) | C9—C8—H8 | 118.9 |
| O7v—Nd1—N1 | 142.1 (3) | N11—C9—C8 | 121.1 (11) |
| O8—Nd1—N1 | 115.7 (3) | N11—C9—H9 | 119.5 |
| N11iv—Nd1—N1 | 119.8 (3) | C8—C9—H9 | 119.5 |
| C5—O1—Nd1 | 130.6 (6) | O4—C10—O3 | 126.2 (11) |
| H1W—O1W—H2W | 111.8 | O4—C10—C6 | 117.0 (10) |
| N2—C2—C1 | 121.5 (10) | O3—C10—C6 | 116.8 (10) |
| H··· | ||||
| O1W—H1W···O4iv | 0.84 | 2.31 | 2.975 (13) | 137 |
| C3—H3···O1vi | 0.93 | 2.34 | 3.221 (12) | 158 |
| C3—H3···O8vi | 0.93 | 2.49 | 3.150 (13) | 128 |
| C4—H4···O5 | 0.93 | 2.54 | 3.170 (13) | 125 |
| C9—H9···O2ix | 0.93 | 2.47 | 3.270 (15) | 145 |
| C9—H9···O7x | 0.93 | 2.35 | 2.971 (15) | 124 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.84 | 2.31 | 2.975 (13) | 137 |
| C3—H3⋯O1ii | 0.93 | 2.34 | 3.221 (12) | 158 |
| C3—H3⋯O8ii | 0.93 | 2.49 | 3.150 (13) | 128 |
| C4—H4⋯O5 | 0.93 | 2.54 | 3.170 (13) | 125 |
| C9—H9⋯O2iii | 0.93 | 2.47 | 3.270 (15) | 145 |
| C9—H9⋯O7iv | 0.93 | 2.35 | 2.971 (15) | 124 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .