Literature DB >> 21582741

Bis(acetyl-acetonato-κO,O')(2-amino-1-methyl-1H-benzimidazole-κN)oxido-vanadium(IV).

Zukhra Ch Kadirova, Dilnoza S Rahmonova, Samat A Talipov, Jamshid M Ashurov, Nusrat A Parpiev.   

Abstract

The title mixed-ligand oxidovanadium(IV) compound, [VO(C(5)H(7)O(2))(2)(C(8)H(9)N(3))], contains a V(IV) atom in a distorted octahedral coordination, which is typical for such complexes. The vanadyl group and the N-heterocyclic ligand are cis to each other. The coordination bond is located at the endocyclic N atom of the benzimidazole ligand. Intra-molecular hydrogen bonds between the exo-NH(2) group H atoms and acetyl-acetonate O atoms stabilize the crystal structure.

Entities:  

Year:  2009        PMID: 21582741      PMCID: PMC2969291          DOI: 10.1107/S1600536809023113

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the activity of vanadium complexes, see: Rehder (1999 ▶). For the crystal structures of n class="Chemical">acetylacetonate and benzimidazole oxidovanadium(IV) and (V) complexes, see: Maurya (2002 ▶); Caira et al. (1972 ▶); Shao et al. (1984 ▶); Crans et al. (1997 ▶); Maurya et al. (2006 ▶); Akhmed et al. (2004 ▶). For 1-methyl- 2-aminobenzimidazole compounds, see: Borodkina et al. (2003 ▶); Chekhlov (2004 ▶).

Experimental

Crystal data

[V(C5H7O2)2O(C8H9N3)] M = 412.33 Monoclinic, a = 8.27120 (10) Å b = 15.0472 (2) Å c = 16.1078 (2) Å β = 104.2646 (14)° V = 1942.94 (4) Å3 Z = 4 Cu Kα radiation μ = 4.57 mm−1 T = 293 K 0.25 × 0.12 × 0.08 mm

Data collection

Oxford Diffraction Xcalibur diffractometer Absorption correction: multi-scan (CrysAlisPro; Oxford Diffraction, 2007 ▶) T min = 0.544, T max = 0.694 8892 measured reflections 3720 independent reflections 2983 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.106 S = 1.00 3720 reflections 249 parameters H-atom parameters constrained Δρmax = 0.20 e Å−3 Δρmin = −0.23 e Å−3 Data collection: CrysAlisPro (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlisPro; data reduction: CrysAlisPro; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809023113/su2113sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809023113/su2113Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[V(C5H7O2)2O(C8H9N3)]F(000) = 860
Mr = 412.33Dx = 1.410 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ynCell parameters from 3720 reflections
a = 8.2712 (1) Åθ = 4.1–76.0°
b = 15.0472 (2) ŵ = 4.57 mm1
c = 16.1078 (2) ÅT = 293 K
β = 104.2646 (14)°Monoclinic, green
V = 1942.94 (4) Å30.25 × 0.12 × 0.08 mm
Z = 4
Oxford Diffraction Xcalibur diffractometer2983 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.028
graphiteθmax = 76.0°, θmin = 4.1°
heavy atom scansh = −9→9
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007)k = −18→17
Tmin = 0.544, Tmax = 0.694l = −20→20
8892 measured reflections3 standard reflections every 120 reflections
3720 independent reflections intensity decay: none
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.106H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0695P)2] where P = (Fo2 + 2Fc2)/3
3720 reflections(Δ/σ)max = 0.001
249 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
V10.72939 (4)0.84139 (2)0.15879 (2)0.0439 (1)
O1B0.85987 (19)0.94296 (8)0.22441 (9)0.0495 (5)
O1C0.7792 (2)0.89026 (9)0.05202 (9)0.0572 (5)
O1V0.5517 (2)0.88731 (10)0.14793 (10)0.0590 (5)
O2B0.9707 (2)0.78057 (10)0.17502 (10)0.0556 (5)
O2C0.6598 (2)0.72797 (9)0.09633 (9)0.0559 (5)
N1A0.7312 (2)0.77605 (10)0.27641 (10)0.0450 (5)
N2A0.7430 (3)0.67520 (11)0.37942 (11)0.0579 (7)
N3A0.8363 (3)0.63142 (12)0.25875 (13)0.0667 (8)
C1A0.6736 (3)0.81453 (13)0.34241 (12)0.0475 (6)
C1B1.0649 (4)1.03962 (17)0.3018 (2)0.0777 (10)
C1C0.7707 (5)0.9161 (2)−0.09262 (17)0.0869 (13)
C2A0.6149 (3)0.89931 (15)0.35119 (14)0.0577 (8)
C2B1.0157 (3)0.95299 (13)0.25591 (12)0.0497 (7)
C2C0.7364 (3)0.85815 (15)−0.02274 (15)0.0574 (8)
C3A0.5629 (4)0.91763 (18)0.42447 (17)0.0732 (10)
C3B1.1380 (3)0.89314 (15)0.25154 (17)0.0630 (8)
C3C0.6646 (4)0.77473 (16)−0.04198 (15)0.0637 (8)
C4A0.5667 (5)0.8537 (2)0.48746 (18)0.0844 (13)
C4B1.1117 (3)0.80980 (14)0.21204 (13)0.0505 (7)
C4C0.6354 (3)0.71403 (14)0.01637 (14)0.0523 (7)
C5A0.6251 (4)0.76985 (18)0.47967 (16)0.0768 (12)
C5B1.2601 (3)0.75171 (16)0.21416 (18)0.0698 (9)
C5C0.5724 (4)0.62284 (17)−0.01264 (17)0.0725 (9)
C6A0.6788 (3)0.75212 (14)0.40690 (13)0.0562 (7)
C7A0.7706 (3)0.69247 (13)0.30215 (13)0.0504 (7)
C8A0.7863 (4)0.59453 (16)0.43059 (17)0.0768 (9)
H3AA0.856100.645000.210400.0800*
H3AB0.858300.578900.279400.0800*
H2AA0.610600.942300.309200.0690*
H3AC0.524200.974400.432000.0880*
H4A0.528800.868300.535500.1020*
H5AA0.628500.726800.521500.0920*
H8AA0.867400.561200.410000.1150*
H8AB0.688100.559000.426000.1150*
H8AC0.831900.610300.489500.1150*
H1BA1.041801.087600.261400.1170*
H1BB1.181901.038700.329300.1170*
H1BC1.002301.047800.344200.1170*
H3BA1.247600.909200.276900.0750*
H5BA1.222900.694200.191600.1050*
H5BB1.324700.745700.272200.1050*
H5BC1.327500.778100.180100.1050*
H1CA0.878200.94350−0.073000.1300*
H1CB0.686500.96130−0.107200.1300*
H1CC0.769400.88050−0.142200.1300*
H3CA0.633500.75860−0.099500.0760*
H5CA0.651700.579200.015600.1090*
H5CB0.557600.61810−0.073500.1090*
H5CC0.467500.612900.001400.1090*
U11U22U33U12U13U23
V10.0518 (2)0.0385 (2)0.0396 (2)−0.0028 (1)0.0080 (1)−0.0025 (1)
O1B0.0574 (9)0.0391 (7)0.0499 (8)−0.0030 (6)0.0091 (6)−0.0053 (6)
O1C0.0787 (11)0.0472 (8)0.0483 (8)−0.0081 (7)0.0207 (7)−0.0005 (6)
O1V0.0571 (10)0.0618 (9)0.0548 (9)0.0055 (7)0.0073 (7)0.0089 (7)
O2B0.0558 (10)0.0477 (8)0.0632 (9)0.0019 (6)0.0144 (7)−0.0092 (6)
O2C0.0729 (11)0.0472 (8)0.0433 (7)−0.0124 (7)0.0063 (7)−0.0051 (6)
N1A0.0543 (10)0.0383 (8)0.0401 (8)−0.0030 (7)0.0071 (7)−0.0021 (6)
N2A0.0848 (15)0.0398 (9)0.0435 (9)−0.0063 (9)0.0054 (9)0.0015 (7)
N3A0.0966 (17)0.0426 (9)0.0608 (12)0.0106 (10)0.0193 (11)−0.0009 (8)
C1A0.0541 (13)0.0442 (10)0.0409 (10)−0.0077 (9)0.0053 (8)−0.0041 (8)
C1B0.084 (2)0.0505 (13)0.0874 (19)−0.0150 (12)0.0000 (15)−0.0131 (12)
C1C0.130 (3)0.0822 (18)0.0595 (15)−0.0136 (18)0.0444 (16)−0.0004 (13)
C2A0.0689 (15)0.0514 (12)0.0503 (12)0.0024 (10)0.0097 (10)−0.0021 (9)
C2B0.0621 (14)0.0430 (10)0.0415 (10)−0.0093 (9)0.0083 (9)0.0022 (8)
C2C0.0703 (16)0.0576 (13)0.0494 (11)0.0073 (11)0.0246 (10)−0.0027 (9)
C3A0.097 (2)0.0639 (15)0.0623 (14)0.0086 (14)0.0263 (14)−0.0116 (12)
C3B0.0499 (14)0.0591 (13)0.0736 (15)−0.0065 (10)0.0033 (11)−0.0042 (11)
C3C0.0863 (18)0.0616 (14)0.0451 (11)−0.0049 (12)0.0199 (11)−0.0113 (10)
C4A0.121 (3)0.087 (2)0.0534 (14)−0.0039 (17)0.0369 (16)−0.0130 (13)
C4B0.0537 (13)0.0511 (11)0.0477 (10)0.0020 (9)0.0146 (9)0.0085 (8)
C4C0.0554 (13)0.0492 (11)0.0489 (11)0.0013 (9)0.0064 (9)−0.0105 (9)
C5A0.118 (3)0.0664 (16)0.0471 (12)−0.0123 (15)0.0222 (14)0.0000 (11)
C5B0.0621 (17)0.0719 (16)0.0744 (16)0.0144 (12)0.0150 (13)0.0031 (12)
C5C0.095 (2)0.0597 (14)0.0575 (14)−0.0135 (13)0.0088 (13)−0.0165 (11)
C6A0.0747 (16)0.0492 (11)0.0415 (10)−0.0104 (10)0.0083 (10)−0.0029 (8)
C7A0.0606 (14)0.0395 (10)0.0462 (10)−0.0023 (9)0.0038 (9)−0.0032 (8)
C8A0.115 (2)0.0467 (12)0.0609 (14)−0.0096 (13)0.0069 (15)0.0115 (10)
V1—O1B2.0139 (14)C3C—C4C1.374 (3)
V1—O1C2.0044 (15)C4A—C5A1.368 (4)
V1—O1V1.5942 (17)C4B—C5B1.500 (3)
V1—O2B2.1523 (17)C4C—C5C1.501 (3)
V1—O2C1.9927 (14)C5A—C6A1.378 (4)
V1—N1A2.1313 (16)C1B—H1BA0.9600
O1B—C2B1.273 (3)C1B—H1BB0.9600
O1C—C2C1.264 (3)C1B—H1BC0.9600
O2B—C4B1.252 (3)C1C—H1CA0.9600
O2C—C4C1.271 (3)C1C—H1CB0.9600
N1A—C1A1.394 (3)C1C—H1CC0.9600
N1A—C7A1.339 (2)C2A—H2AA0.9300
N2A—C6A1.391 (3)C3A—H3AC0.9300
N2A—C7A1.345 (3)C3B—H3BA0.9300
N2A—C8A1.461 (3)C3C—H3CA0.9300
N3A—C7A1.347 (3)C4A—H4A0.9300
N3A—H3AB0.8600C5A—H5AA0.9300
N3A—H3AA0.8600C5B—H5BA0.9600
C1A—C2A1.385 (3)C5B—H5BB0.9600
C1A—C6A1.393 (3)C5B—H5BC0.9600
C1B—C2B1.504 (3)C5C—H5CA0.9600
C1C—C2C1.505 (4)C5C—H5CB0.9600
C2A—C3A1.380 (4)C5C—H5CC0.9600
C2B—C3B1.369 (3)C8A—H8AA0.9600
C2C—C3C1.391 (3)C8A—H8AB0.9600
C3A—C4A1.393 (4)C8A—H8AC0.9600
C3B—C4B1.399 (3)
O1B—V1—O1C88.57 (6)C1A—C6A—C5A123.1 (2)
O1B—V1—O1V95.11 (7)N2A—C6A—C1A105.53 (18)
O1B—V1—O2B84.14 (6)N2A—C6A—C5A131.3 (2)
O1B—V1—O2C164.96 (7)N1A—C7A—N2A112.59 (18)
O1B—V1—N1A89.89 (6)N1A—C7A—N3A125.33 (19)
O1C—V1—O1V97.22 (7)N2A—C7A—N3A122.05 (19)
O1C—V1—O2B83.09 (6)C2B—C1B—H1BA110.00
O1C—V1—O2C88.62 (6)C2B—C1B—H1BB110.00
O1C—V1—N1A166.93 (7)C2B—C1B—H1BC109.00
O1V—V1—O2B179.18 (7)H1BA—C1B—H1BB109.00
O1V—V1—O2C99.91 (7)H1BA—C1B—H1BC109.00
O1V—V1—N1A95.85 (7)H1BB—C1B—H1BC109.00
O2B—V1—O2C80.85 (6)C2C—C1C—H1CA109.00
O2B—V1—N1A83.84 (6)C2C—C1C—H1CB110.00
O2C—V1—N1A89.52 (6)C2C—C1C—H1CC109.00
V1—O1B—C2B131.18 (13)H1CA—C1C—H1CB109.00
V1—O1C—C2C127.48 (15)H1CA—C1C—H1CC109.00
V1—O2B—C4B129.48 (14)H1CB—C1C—H1CC109.00
V1—O2C—C4C127.37 (13)C1A—C2A—H2AA121.00
V1—N1A—C1A123.89 (12)C3A—C2A—H2AA121.00
V1—N1A—C7A131.02 (14)C2A—C3A—H3AC119.00
C1A—N1A—C7A104.89 (16)C4A—C3A—H3AC119.00
C6A—N2A—C7A107.40 (17)C2B—C3B—H3BA117.00
C6A—N2A—C8A124.86 (19)C4B—C3B—H3BA117.00
C7A—N2A—C8A127.5 (2)C2C—C3C—H3CA117.00
H3AA—N3A—H3AB120.00C4C—C3C—H3CA117.00
C7A—N3A—H3AA120.00C3A—C4A—H4A119.00
C7A—N3A—H3AB120.00C5A—C4A—H4A120.00
N1A—C1A—C6A109.59 (17)C4A—C5A—H5AA122.00
N1A—C1A—C2A130.93 (18)C6A—C5A—H5AA122.00
C2A—C1A—C6A119.5 (2)C4B—C5B—H5BA109.00
C1A—C2A—C3A117.6 (2)C4B—C5B—H5BB109.00
O1B—C2B—C1B115.1 (2)C4B—C5B—H5BC109.00
O1B—C2B—C3B126.17 (19)H5BA—C5B—H5BB109.00
C1B—C2B—C3B118.8 (2)H5BA—C5B—H5BC110.00
O1C—C2C—C3C124.1 (2)H5BB—C5B—H5BC109.00
O1C—C2C—C1C115.5 (2)C4C—C5C—H5CA109.00
C1C—C2C—C3C120.3 (2)C4C—C5C—H5CB109.00
C2A—C3A—C4A122.0 (3)C4C—C5C—H5CC109.00
C2B—C3B—C4B125.4 (2)H5CA—C5C—H5CB109.00
C2C—C3C—C4C125.8 (2)H5CA—C5C—H5CC109.00
C3A—C4A—C5A121.0 (3)H5CB—C5C—H5CC109.00
C3B—C4B—C5B118.5 (2)N2A—C8A—H8AA110.00
O2B—C4B—C5B117.85 (19)N2A—C8A—H8AB110.00
O2B—C4B—C3B123.6 (2)N2A—C8A—H8AC110.00
O2C—C4C—C3C124.9 (2)H8AA—C8A—H8AB109.00
O2C—C4C—C5C115.0 (2)H8AA—C8A—H8AC109.00
C3C—C4C—C5C120.1 (2)H8AB—C8A—H8AC109.00
C4A—C5A—C6A116.9 (2)
O1C—V1—O1B—C2B−83.35 (17)V1—N1A—C1A—C2A−4.2 (3)
O1V—V1—O1B—C2B179.53 (17)C1A—N1A—C7A—N3A−178.0 (2)
O2B—V1—O1B—C2B−0.15 (17)V1—N1A—C7A—N3A7.1 (4)
N1A—V1—O1B—C2B83.67 (17)C7A—N1A—C1A—C6A−0.4 (3)
O1B—V1—O1C—C2C178.64 (19)C1A—N1A—C7A—N2A−0.2 (3)
O1V—V1—O1C—C2C−86.4 (2)C7A—N1A—C1A—C2A−179.6 (3)
O2B—V1—O1C—C2C94.37 (19)C8A—N2A—C6A—C5A−7.5 (5)
O2C—V1—O1C—C2C13.42 (19)C8A—N2A—C7A—N1A−173.6 (2)
O1B—V1—O2B—C4B0.1 (2)C7A—N2A—C6A—C5A177.9 (3)
O1C—V1—O2B—C4B89.40 (18)C8A—N2A—C7A—N3A4.3 (4)
O2C—V1—O2B—C4B179.11 (19)C6A—N2A—C7A—N1A0.8 (3)
N1A—V1—O2B—C4B−90.39 (18)C6A—N2A—C7A—N3A178.6 (2)
O1C—V1—O2C—C4C−11.2 (2)C7A—N2A—C6A—C1A−1.0 (3)
O1V—V1—O2C—C4C85.9 (2)C8A—N2A—C6A—C1A173.6 (2)
O2B—V1—O2C—C4C−94.4 (2)N1A—C1A—C2A—C3A178.8 (3)
N1A—V1—O2C—C4C−178.3 (2)N1A—C1A—C6A—C5A−178.1 (2)
O1B—V1—N1A—C1A55.10 (17)N1A—C1A—C6A—N2A0.8 (3)
O1B—V1—N1A—C7A−130.9 (2)C2A—C1A—C6A—N2A−179.9 (2)
O1V—V1—N1A—C1A−40.02 (17)C2A—C1A—C6A—C5A1.2 (4)
O1V—V1—N1A—C7A134.0 (2)C6A—C1A—C2A—C3A−0.4 (4)
O2B—V1—N1A—C1A139.22 (17)C1A—C2A—C3A—C4A−0.7 (4)
O2B—V1—N1A—C7A−46.7 (2)C1B—C2B—C3B—C4B179.3 (2)
O2C—V1—N1A—C1A−139.93 (17)O1B—C2B—C3B—C4B−0.7 (4)
O2C—V1—N1A—C7A34.1 (2)O1C—C2C—C3C—C4C−2.6 (5)
V1—O1B—C2B—C1B−179.51 (16)C1C—C2C—C3C—C4C176.4 (3)
V1—O1B—C2B—C3B0.4 (3)C2A—C3A—C4A—C5A1.0 (5)
V1—O1C—C2C—C3C−9.3 (4)C2B—C3B—C4B—O2B0.6 (4)
V1—O1C—C2C—C1C171.7 (2)C2B—C3B—C4B—C5B−179.2 (2)
V1—O2B—C4B—C5B179.41 (15)C2C—C3C—C4C—C5C−174.0 (3)
V1—O2B—C4B—C3B−0.4 (3)C2C—C3C—C4C—O2C5.0 (5)
V1—O2C—C4C—C5C−176.10 (18)C3A—C4A—C5A—C6A−0.2 (5)
V1—O2C—C4C—C3C4.9 (4)C4A—C5A—C6A—N2A−179.6 (3)
V1—N1A—C7A—N2A−175.13 (16)C4A—C5A—C6A—C1A−0.9 (4)
V1—N1A—C1A—C6A174.97 (15)
D—H···AD—HH···AD···AD—H···A
N3A—H3AA···O2B0.862.382.972 (3)127
N3A—H3AA···O2C0.862.473.034 (2)124
C8A—H8AA···N3A0.962.612.950 (3)101
C8A—H8AB···O1Ci0.962.573.146 (3)119
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3A—H3AA⋯O2B0.862.382.972 (3)127
N3A—H3AA⋯O2C0.862.473.034 (2)124
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, characterization, reactivity, and catalytic potential of model vanadium(IV, V) complexes with benzimidazole-derived ONN donor ligands.

Authors:  Mannar R Maurya; Amit Kumar; Martin Ebel; Dieter Rehder
Journal:  Inorg Chem       Date:  2006-07-24       Impact factor: 5.165

  2 in total

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