Literature DB >> 21582622

5-(1-Cyclo-hexen-1-yl)-3-(4-methoxy-phen-yl)isoxazole.

Gabriel Vallejos, Margarita Gutierrez, Luis Astudillo, Iván Brito, Alejandro Cárdenas.   

Abstract

In the title compound, C(16)H(17)NO(2), the isoxazole ring makes a dihedral angle of 14.81 (13)° with the 4-methoxy-phenyl ring. Two atoms of the cyclo-hexene ring are disordered over two almost equally occupied positions [0.526 (13)/0.474 (13)]. The mol-ecular structure features a short intra-molecular C-H⋯O contact.

Entities:  

Year:  2009        PMID: 21582622      PMCID: PMC2968997          DOI: 10.1107/S1600536809010903

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to isoxazoles, see: Melo (2005 ▶). For their biological activities, see: Narlawar et al. (2008 ▶); Patrick et al. (2007 ▶); Taldone et al. (2008 ▶); Rizzi et al. (2008 ▶); Velaparthi et al. (2008 ▶). For synthetic details, see: Hansen et al. (2005 ▶).

Experimental

Crystal data

C16H17NO2 M = 255.31 Triclinic, a = 5.8690 (11) Å b = 10.9646 (19) Å c = 11.481 (5) Å α = 77.889 (2)° β = 75.728 (5)° γ = 80.262 (9)° V = 694.7 (4) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 295 K 0.20 × 0.16 × 0.10 mm

Data collection

Nonius KappaCCD area-detector diffractometer Absorption correction: none 4217 measured reflections 2467 independent reflections 2023 reflections with I > 2σ(I) R int = 0.076

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.135 S = 1.14 2467 reflections 192 parameters H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.20 e Å−3 Data collection: COLLECT (Nonius, 2000 ▶); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997 ▶); data reduction: DENZO-SMN; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809010903/bt2910sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809010903/bt2910Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H17NO2Z = 2
Mr = 255.31F(000) = 272
Triclinic, P1Dx = 1.221 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.8690 (11) ÅCell parameters from 2123 reflections
b = 10.9646 (19) Åθ = 1.9–24.4°
c = 11.481 (5) ŵ = 0.08 mm1
α = 77.889 (2)°T = 295 K
β = 75.728 (5)°Block, yellow
γ = 80.262 (9)°0.20 × 0.16 × 0.10 mm
V = 694.7 (4) Å3
Nonius KappaCCD area-detector diffractometer2023 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.076
graphiteθmax = 25.2°, θmin = 3.6°
φ scans, and ω scans with κ offsetsh = 0→7
2467 measured reflectionsk = −12→13
2467 independent reflectionsl = −12→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.135H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0545P)2 + 0.128P] where P = (Fo2 + 2Fc2)/3
2467 reflections(Δ/σ)max < 0.001
192 parametersΔρmax = 0.14 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O10.3554 (2)0.17491 (13)−0.04016 (12)0.0640 (4)
O2−0.2921 (2)0.60615 (14)0.41851 (13)0.0715 (4)
N10.3139 (3)0.25243 (16)0.04881 (15)0.0628 (5)
C10.1547 (3)0.10166 (16)−0.16684 (15)0.0495 (4)
C2−0.0473 (4)0.1345 (2)−0.2317 (2)0.0690 (6)
H2A−0.02720.2116−0.29070.083*0.474 (13)
H2B−0.19620.1473−0.17340.083*0.474 (13)
H2C−0.08550.2253−0.24710.083*0.526 (13)
H2D−0.18540.0998−0.1780.083*0.526 (13)
C3A−0.0493 (12)0.0236 (11)−0.2981 (9)0.071 (2)0.474 (13)
H3A1−0.1043−0.0477−0.2380.106*0.474 (13)
H3A2−0.15880.0494−0.35230.106*0.474 (13)
C4A0.1966 (18)−0.0159 (11)−0.3718 (9)0.081 (2)0.474 (13)
H4A10.1885−0.0773−0.41990.121*0.474 (13)
H4A20.26070.0564−0.42660.121*0.474 (13)
C50.3446 (4)−0.0697 (2)−0.2859 (2)0.0758 (6)
H5A0.5079−0.0816−0.33030.091*0.474 (13)
H5B0.2998−0.1517−0.2450.091*0.474 (13)
H5C0.3818−0.1576−0.2520.091*0.526 (13)
H5D0.4711−0.0468−0.35560.091*0.526 (13)
C60.3280 (3)0.00944 (18)−0.19162 (18)0.0607 (5)
H60.4466−0.007−0.14760.073*
C70.1488 (3)0.17676 (16)−0.07484 (15)0.0483 (4)
C8−0.0224 (3)0.25240 (16)−0.01282 (15)0.0494 (4)
H8−0.17980.2716−0.01940.059*
C90.0881 (3)0.29654 (16)0.06460 (16)0.0475 (4)
C10−0.0167 (3)0.37884 (16)0.15521 (15)0.0470 (4)
C11−0.2372 (3)0.44858 (17)0.15767 (16)0.0534 (5)
H11−0.32150.44310.10060.064*
C12−0.3358 (3)0.52620 (17)0.24271 (17)0.0550 (5)
H12−0.48380.57260.2420.066*
C13−0.2127 (3)0.53436 (17)0.32878 (17)0.0539 (5)
C140.0074 (3)0.4641 (2)0.32840 (19)0.0650 (5)
H140.09030.46860.38640.078*
C150.1035 (3)0.38833 (19)0.24361 (18)0.0605 (5)
H150.25160.34220.24460.073*
C16−0.5130 (4)0.6839 (2)0.4212 (2)0.0756 (6)
H16A−0.50460.74350.34640.113*
H16B−0.54760.72790.48870.113*
H16C−0.63590.63270.43030.113*
C3B0.0006 (13)0.0880 (9)−0.3512 (8)0.0726 (19)0.526 (13)
H3B10.11380.1355−0.41240.087*0.526 (13)
H3B2−0.14480.0981−0.37990.087*0.526 (13)
C4B0.0995 (17)−0.0499 (7)−0.3290 (8)0.0731 (19)0.526 (13)
H4B10.1244−0.0833−0.40360.11*0.526 (13)
H4B2−0.0147−0.0961−0.2670.11*0.526 (13)
U11U22U33U12U13U23
O10.0476 (7)0.0832 (9)0.0673 (9)0.0055 (6)−0.0185 (6)−0.0305 (7)
O20.0740 (9)0.0768 (9)0.0685 (9)0.0023 (7)−0.0157 (7)−0.0325 (8)
N10.0514 (9)0.0822 (11)0.0622 (10)0.0027 (8)−0.0193 (7)−0.0297 (9)
C10.0466 (10)0.0553 (10)0.0451 (10)−0.0090 (8)−0.0065 (7)−0.0073 (8)
C20.0610 (12)0.0819 (14)0.0743 (14)−0.0005 (10)−0.0252 (10)−0.0304 (12)
C3A0.062 (3)0.087 (6)0.075 (5)−0.004 (3)−0.027 (3)−0.029 (4)
C4A0.079 (5)0.106 (6)0.063 (5)−0.008 (4)−0.010 (4)−0.039 (4)
C50.0782 (14)0.0745 (14)0.0755 (15)0.0014 (11)−0.0122 (12)−0.0294 (12)
C60.0594 (11)0.0648 (12)0.0584 (12)−0.0014 (9)−0.0147 (9)−0.0146 (10)
C70.0430 (9)0.0559 (10)0.0456 (10)−0.0077 (7)−0.0113 (7)−0.0045 (8)
C80.0406 (9)0.0601 (11)0.0484 (10)−0.0046 (7)−0.0113 (7)−0.0111 (8)
C90.0432 (9)0.0525 (10)0.0451 (10)−0.0071 (7)−0.0110 (7)−0.0023 (8)
C100.0439 (9)0.0529 (10)0.0437 (10)−0.0100 (7)−0.0086 (7)−0.0055 (8)
C110.0510 (10)0.0624 (11)0.0494 (11)−0.0056 (8)−0.0173 (8)−0.0090 (9)
C120.0481 (10)0.0588 (11)0.0555 (11)0.0009 (8)−0.0131 (8)−0.0084 (9)
C130.0568 (11)0.0542 (11)0.0501 (11)−0.0103 (8)−0.0083 (8)−0.0092 (9)
C140.0571 (11)0.0840 (14)0.0632 (13)−0.0055 (10)−0.0233 (9)−0.0242 (11)
C150.0470 (10)0.0772 (13)0.0627 (13)0.0006 (9)−0.0188 (9)−0.0227 (10)
C160.0791 (14)0.0645 (13)0.0747 (15)0.0025 (11)−0.0032 (11)−0.0189 (11)
C3B0.090 (4)0.072 (4)0.066 (4)−0.002 (3)−0.035 (3)−0.019 (3)
C4B0.087 (5)0.072 (4)0.067 (4)−0.003 (3)−0.020 (4)−0.029 (3)
O1—C71.362 (2)C5—H5D0.97
O1—N11.413 (2)C6—H60.93
O2—C131.370 (2)C7—C81.348 (2)
O2—C161.424 (2)C8—C91.420 (2)
N1—C91.313 (2)C8—H80.93
C1—C61.330 (2)C9—C101.472 (2)
C1—C71.460 (3)C10—C111.384 (2)
C1—C21.506 (3)C10—C151.400 (3)
C2—C3B1.509 (6)C11—C121.384 (2)
C2—C3A1.569 (7)C11—H110.93
C2—H2A0.97C12—C131.385 (3)
C2—H2B0.97C12—H120.93
C2—H2C0.97C13—C141.387 (3)
C2—H2D0.97C14—C151.366 (3)
C3A—C4A1.525 (13)C14—H140.93
C3A—H3A10.97C15—H150.93
C3A—H3A20.97C16—H16A0.96
C4A—C51.442 (9)C16—H16B0.96
C4A—H4A10.97C16—H16C0.96
C4A—H4A20.97C3B—C4B1.517 (12)
C5—C61.499 (3)C3B—H3B10.97
C5—C4B1.601 (8)C3B—H3B20.97
C5—H5A0.97C4B—H4B10.97
C5—H5B0.97C4B—H4B20.97
C5—H5C0.97
C7—O1—N1108.69 (13)C4B—C5—H5D109.6
C13—O2—C16118.24 (16)H5B—C5—H5D130.2
C9—N1—O1105.65 (13)H5C—C5—H5D108.1
C6—C1—C7121.93 (16)C1—C6—C5124.23 (19)
C6—C1—C2121.99 (18)C1—C6—H6117.9
C7—C1—C2116.08 (15)C5—C6—H6117.9
C1—C2—C3B114.7 (3)C8—C7—O1108.99 (15)
C1—C2—C3A108.3 (3)C8—C7—C1133.87 (16)
C1—C2—H2A110O1—C7—C1117.14 (15)
C3B—C2—H2A78C7—C8—C9105.51 (15)
C3A—C2—H2A110C7—C8—H8127.2
C1—C2—H2B110C9—C8—H8127.2
C3B—C2—H2B129.1N1—C9—C8111.14 (16)
C3A—C2—H2B110N1—C9—C10119.80 (15)
H2A—C2—H2B108.4C8—C9—C10129.05 (15)
C1—C2—H2C108.6C11—C10—C15117.38 (17)
C3B—C2—H2C108.6C11—C10—C9121.84 (15)
C3A—C2—H2C136.3C15—C10—C9120.78 (16)
H2B—C2—H2C77.8C12—C11—C10121.89 (16)
C1—C2—H2D108.6C12—C11—H11119.1
C3B—C2—H2D108.6C10—C11—H11119.1
C3A—C2—H2D81.5C11—C12—C13119.56 (16)
H2A—C2—H2D133C11—C12—H12120.2
H2C—C2—H2D107.6C13—C12—H12120.2
C4A—C3A—C2111.4 (8)O2—C13—C12125.20 (17)
C4A—C3A—H3A1109.3O2—C13—C14115.51 (16)
C2—C3A—H3A1109.3C12—C13—C14119.28 (18)
C4A—C3A—H3A2109.3C15—C14—C13120.63 (17)
C2—C3A—H3A2109.3C15—C14—H14119.7
H3A1—C3A—H3A2108C13—C14—H14119.7
C5—C4A—C3A107.3 (8)C14—C15—C10121.24 (18)
C5—C4A—H4A1110.3C14—C15—H15119.4
C3A—C4A—H4A1110.3C10—C15—H15119.4
C5—C4A—H4A2110.3O2—C16—H16A109.5
C3A—C4A—H4A2110.3O2—C16—H16B109.5
H4A1—C4A—H4A2108.5H16A—C16—H16B109.5
C4A—C5—C6113.5 (4)O2—C16—H16C109.5
C6—C5—C4B110.4 (3)H16A—C16—H16C109.5
C4A—C5—H5A108.9H16B—C16—H16C109.5
C6—C5—H5A108.9C2—C3B—C4B107.7 (7)
C4B—C5—H5A131.7C2—C3B—H3B1110.2
C4A—C5—H5B108.9C4B—C3B—H3B1110.2
C6—C5—H5B108.9C2—C3B—H3B2110.2
C4B—C5—H5B84.8C4B—C3B—H3B2110.2
H5A—C5—H5B107.7H3B1—C3B—H3B2108.5
C4A—C5—H5C128.3C3B—C4B—C5111.5 (7)
C6—C5—H5C109.6C3B—C4B—H4B1109.3
C4B—C5—H5C109.6C5—C4B—H4B1109.3
H5A—C5—H5C81.9C3B—C4B—H4B2109.3
C4A—C5—H5D83C5—C4B—H4B2109.3
C6—C5—H5D109.6H4B1—C4B—H4B2108
C7—O1—N1—C90.36 (19)C7—C8—C9—N11.2 (2)
C6—C1—C2—C3B−19.4 (5)C7—C8—C9—C10−177.85 (16)
C7—C1—C2—C3B160.8 (5)N1—C9—C10—C11166.10 (16)
C6—C1—C2—C3A15.2 (5)C8—C9—C10—C11−14.9 (3)
C7—C1—C2—C3A−164.6 (5)N1—C9—C10—C15−14.6 (3)
C1—C2—C3A—C4A−48.6 (11)C8—C9—C10—C15164.40 (18)
C3B—C2—C3A—C4A58.7 (9)C15—C10—C11—C120.8 (3)
C2—C3A—C4A—C566.8 (13)C9—C10—C11—C12−179.88 (15)
C3A—C4A—C5—C6−48.4 (12)C10—C11—C12—C13−0.5 (3)
C3A—C4A—C5—C4B41.0 (10)C16—O2—C13—C12−3.3 (3)
C7—C1—C6—C5−179.31 (18)C16—O2—C13—C14177.82 (17)
C2—C1—C6—C50.9 (3)C11—C12—C13—O2−179.06 (16)
C4A—C5—C6—C116.8 (6)C11—C12—C13—C14−0.2 (3)
C4B—C5—C6—C1−13.1 (5)O2—C13—C14—C15179.53 (17)
N1—O1—C7—C80.39 (19)C12—C13—C14—C150.6 (3)
N1—O1—C7—C1−179.91 (14)C13—C14—C15—C10−0.3 (3)
C6—C1—C7—C8−162.0 (2)C11—C10—C15—C14−0.4 (3)
C2—C1—C7—C817.8 (3)C9—C10—C15—C14−179.76 (17)
C6—C1—C7—O118.4 (2)C1—C2—C3B—C4B49.0 (10)
C2—C1—C7—O1−161.79 (16)C3A—C2—C3B—C4B−36.8 (7)
O1—C7—C8—C9−0.93 (19)C2—C3B—C4B—C5−61.8 (11)
C1—C7—C8—C9179.44 (18)C4A—C5—C4B—C3B−57.8 (11)
O1—N1—C9—C8−1.0 (2)C6—C5—C4B—C3B44.2 (10)
O1—N1—C9—C10178.20 (14)
D—H···AD—HH···AD···AD—H···A
C6—H6···O10.932.482.811 (3)101
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6⋯O10.932.482.811 (3)101
  8 in total

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2.  One-pot copper(I)-catalyzed synthesis of 3,5-disubstituted isoxazoles.

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Journal:  J Med Chem       Date:  2008-03-13       Impact factor: 7.446

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Journal:  ChemMedChem       Date:  2008-01       Impact factor: 3.466

Review 6.  Targeting Hsp90: small-molecule inhibitors and their clinical development.

Authors:  Tony Taldone; Alexander Gozman; Ronnie Maharaj; Gabriela Chiosis
Journal:  Curr Opin Pharmacol       Date:  2008-07-31       Impact factor: 5.547

7.  Epiboxidine and novel-related analogues: a convenient synthetic approach and estimation of their affinity at neuronal nicotinic acetylcholine receptor subtypes.

Authors:  Luca Rizzi; Clelia Dallanoce; Carlo Matera; Pietro Magrone; Luca Pucci; Cecilia Gotti; Francesco Clementi; Marco De Amici
Journal:  Bioorg Med Chem Lett       Date:  2008-07-10       Impact factor: 2.823

8.  Structure validation in chemical crystallography.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total
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1.  1-(3-Phenyl-isoxazol-5-yl)cyclo-hexane-1,2-diol.

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  1 in total

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