Literature DB >> 21582589

Isobutyl 3,5-dinitro-benzoate.

Pei Zou1, Min-Hao Xie, Shi-Neng Luo, Ya-Ling Liu, Yong-Jun He.   

Abstract

In the structure of the title compound, C(11)H(12)N(2)O(6), the mol-ecules are stacked along the b axis without any π-π inter-actions. The stacked columns are linked together by non-classical inter-molecular C-H⋯O inter-actions,. In the molecule, the nitro groups make dihedral angles of 9.4 (5) and 10.3 (5)° with the benzene ring.

Entities:  

Year:  2009        PMID: 21582589      PMCID: PMC2968849          DOI: 10.1107/S1600536809010381

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the properties and applications of dinitro­benzoate derivatives, see: Huang et al. (2004 ▶); Kagitani et al. (1984 ▶); Olive (1979 ▶). For the anti-creatinine effects of a series of 3,5-dinitro­benzoic acid esters, see: Yu & Yang (2002 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C11H12N2O6 M = 268.23 Monoclinic, a = 16.666 (3) Å b = 4.776 (1) Å c = 16.678 (3) Å β = 110.30 (3)° V = 1245.1 (5) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.965, T max = 0.988 2348 measured reflections 2266 independent reflections 1402 reflections with I > 2σ(I) R int = 0.061 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.069 wR(F 2) = 0.225 S = 1.11 2266 reflections 172 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.30 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo,1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809010381/pv2148sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809010381/pv2148Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H12N2O6F(000) = 560
Mr = 268.23Dx = 1.431 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 25 reflections
a = 16.666 (3) Åθ = 9–12°
b = 4.776 (1) ŵ = 0.12 mm1
c = 16.678 (3) ÅT = 293 K
β = 110.30 (3)°Needle, colourless
V = 1245.1 (5) Å30.30 × 0.20 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer1402 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.061
graphiteθmax = 25.3°, θmin = 1.5°
ω/2θ scansh = 0→20
Absorption correction: ψ scan (North et al., 1968)k = 0→5
Tmin = 0.965, Tmax = 0.988l = −20→18
2348 measured reflections3 standard reflections every 200 reflections
2266 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.069Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.225H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.1P)2 + P] where P = (Fo2 + 2Fc2)/3
2266 reflections(Δ/σ)max < 0.001
172 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O1−0.17180 (16)−0.2811 (6)0.58690 (17)0.0567 (8)
O2−0.08913 (17)−0.4218 (7)0.51387 (18)0.0616 (8)
O3−0.0648 (2)0.3897 (9)0.8166 (2)0.0933 (13)
O40.0522 (2)0.6102 (7)0.8340 (2)0.0767 (10)
O50.23983 (17)0.2979 (6)0.68814 (18)0.0603 (8)
O60.20462 (18)−0.0604 (6)0.60527 (19)0.0637 (9)
N1−0.0004 (2)0.4291 (8)0.8000 (2)0.0542 (9)
N20.18975 (19)0.1116 (7)0.6515 (2)0.0463 (8)
C1−0.2813 (3)−0.6160 (11)0.6546 (3)0.0745 (14)
H1A−0.2346−0.51240.69360.112*
H1B−0.2629−0.80310.64910.112*
H1C−0.3278−0.62240.67610.112*
C2−0.3856 (3)−0.6279 (12)0.5060 (3)0.0864 (17)
H2A−0.4308−0.64440.52890.130*
H2B−0.3680−0.81120.49510.130*
H2C−0.4055−0.52370.45350.130*
C3−0.3102 (3)−0.4769 (9)0.5697 (3)0.0593 (11)
H3A−0.3289−0.28700.57710.071*
C4−0.2420 (3)−0.4536 (10)0.5323 (3)0.0645 (12)
H4A−0.2208−0.63860.52640.077*
H4B−0.2651−0.37020.47590.077*
C5−0.1000 (2)−0.2845 (8)0.5687 (2)0.0418 (8)
C6−0.0337 (2)−0.0901 (7)0.6262 (2)0.0363 (8)
C70.0447 (2)−0.0816 (7)0.6143 (2)0.0388 (8)
H7A0.0553−0.19480.57360.047*
C80.1063 (2)0.0988 (7)0.6641 (2)0.0381 (8)
C90.0934 (2)0.2683 (7)0.7252 (2)0.0406 (8)
H9A0.13560.39010.75780.049*
C100.0157 (2)0.2503 (7)0.7359 (2)0.0407 (8)
C11−0.0482 (2)0.0730 (8)0.6876 (2)0.0430 (9)
H11A−0.10020.06410.69650.052*
U11U22U33U12U13U23
O10.0495 (15)0.0679 (19)0.0601 (17)−0.0169 (14)0.0283 (13)−0.0232 (14)
O20.0559 (17)0.070 (2)0.0611 (17)−0.0124 (15)0.0226 (14)−0.0231 (16)
O30.072 (2)0.123 (3)0.096 (3)0.002 (2)0.043 (2)−0.047 (2)
O40.093 (2)0.066 (2)0.070 (2)−0.0068 (19)0.0260 (18)−0.0222 (18)
O50.0550 (16)0.0615 (19)0.0638 (18)−0.0203 (15)0.0200 (14)−0.0124 (15)
O60.0572 (17)0.067 (2)0.075 (2)−0.0002 (15)0.0328 (15)−0.0174 (17)
N10.056 (2)0.053 (2)0.0485 (19)0.0094 (18)0.0128 (16)−0.0119 (17)
N20.0420 (17)0.048 (2)0.0478 (18)0.0002 (15)0.0143 (14)0.0031 (16)
C10.073 (3)0.085 (4)0.069 (3)−0.020 (3)0.029 (2)−0.008 (3)
C20.051 (3)0.100 (4)0.090 (4)−0.023 (3)0.001 (2)0.023 (3)
C30.052 (2)0.054 (3)0.073 (3)−0.004 (2)0.022 (2)0.006 (2)
C40.056 (2)0.081 (3)0.057 (2)−0.024 (2)0.020 (2)−0.020 (2)
C50.048 (2)0.040 (2)0.0394 (19)−0.0065 (17)0.0181 (16)0.0011 (17)
C60.0414 (18)0.0324 (18)0.0320 (17)−0.0024 (15)0.0088 (14)−0.0001 (15)
C70.0446 (19)0.0347 (18)0.0377 (18)0.0001 (16)0.0151 (15)0.0015 (15)
C80.0384 (18)0.0371 (19)0.0378 (18)0.0030 (15)0.0118 (15)0.0040 (15)
C90.047 (2)0.0325 (19)0.0378 (18)−0.0016 (16)0.0091 (15)−0.0001 (15)
C100.0456 (19)0.038 (2)0.0352 (18)0.0048 (16)0.0095 (15)−0.0036 (15)
C110.0422 (19)0.048 (2)0.0387 (18)0.0011 (17)0.0134 (16)0.0060 (17)
O1—C51.332 (4)C2—H2C0.9600
O1—C41.462 (5)C3—C41.479 (5)
O2—C51.190 (4)C3—H3A0.9800
O3—N11.213 (4)C4—H4A0.9700
O4—N11.222 (4)C4—H4B0.9700
O5—N21.228 (4)C5—C61.505 (5)
O6—N21.210 (4)C6—C111.373 (5)
N1—C101.463 (5)C6—C71.390 (5)
N2—C81.478 (4)C7—C81.377 (5)
C1—C31.485 (6)C7—H7A0.9300
C1—H1A0.9600C8—C91.375 (5)
C1—H1B0.9600C9—C101.369 (5)
C1—H1C0.9600C9—H9A0.9300
C2—C31.517 (6)C10—C111.381 (5)
C2—H2A0.9600C11—H11A0.9300
C2—H2B0.9600
C5—O1—C4116.0 (3)O1—C4—H4A109.6
O3—N1—O4123.5 (4)C3—C4—H4A109.6
O3—N1—C10118.5 (4)O1—C4—H4B109.6
O4—N1—C10117.9 (3)C3—C4—H4B109.6
O6—N2—O5123.7 (3)H4A—C4—H4B108.1
O6—N2—C8118.3 (3)O2—C5—O1124.8 (3)
O5—N2—C8118.0 (3)O2—C5—C6123.7 (3)
C3—C1—H1A109.5O1—C5—C6111.5 (3)
C3—C1—H1B109.5C11—C6—C7120.5 (3)
H1A—C1—H1B109.5C11—C6—C5123.0 (3)
C3—C1—H1C109.5C7—C6—C5116.5 (3)
H1A—C1—H1C109.5C8—C7—C6118.2 (3)
H1B—C1—H1C109.5C8—C7—H7A120.9
C3—C2—H2A109.5C6—C7—H7A120.9
C3—C2—H2B109.5C7—C8—C9122.7 (3)
H2A—C2—H2B109.5C7—C8—N2118.8 (3)
C3—C2—H2C109.5C9—C8—N2118.6 (3)
H2A—C2—H2C109.5C10—C9—C8117.3 (3)
H2B—C2—H2C109.5C10—C9—H9A121.4
C4—C3—C1113.2 (4)C8—C9—H9A121.4
C4—C3—C2108.1 (4)C9—C10—C11122.3 (3)
C1—C3—C2111.8 (4)C9—C10—N1118.7 (3)
C4—C3—H3A107.9C11—C10—N1119.0 (3)
C1—C3—H3A107.9C6—C11—C10118.9 (3)
C2—C3—H3A107.9C6—C11—H11A120.5
O1—C4—C3110.2 (3)C10—C11—H11A120.5
C5—O1—C4—C3168.4 (4)O6—N2—C8—C9171.3 (3)
C1—C3—C4—O1−62.2 (5)O5—N2—C8—C9−9.2 (5)
C2—C3—C4—O1173.4 (4)C7—C8—C9—C100.6 (5)
C4—O1—C5—O2−2.2 (6)N2—C8—C9—C10−179.5 (3)
C4—O1—C5—C6177.4 (3)C8—C9—C10—C11−0.6 (5)
O2—C5—C6—C11178.1 (4)C8—C9—C10—N1−179.6 (3)
O1—C5—C6—C11−1.5 (5)O3—N1—C10—C9−171.3 (4)
O2—C5—C6—C7−1.8 (5)O4—N1—C10—C98.5 (5)
O1—C5—C6—C7178.6 (3)O3—N1—C10—C119.7 (5)
C11—C6—C7—C8−1.5 (5)O4—N1—C10—C11−170.5 (3)
C5—C6—C7—C8178.4 (3)C7—C6—C11—C101.5 (5)
C6—C7—C8—C90.4 (5)C5—C6—C11—C10−178.4 (3)
C6—C7—C8—N2−179.5 (3)C9—C10—C11—C6−0.4 (5)
O6—N2—C8—C7−8.8 (5)N1—C10—C11—C6178.5 (3)
O5—N2—C8—C7170.7 (3)
D—H···AD—HH···AD···AD—H···A
C7—H7A···O2i0.932.523.441 (5)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C7—H7A⋯O2i0.932.523.441 (5)168

Symmetry code: (i) .

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