Literature DB >> 21582544

4,4'-(1,2,4,5-Tetra-zine-3,6-di-yl)dibenzo-nitrile.

Grzegorz Dutkiewicz1, Teresa Borowiak, Jarosław Spychała.   

Abstract

Mol-ecules of the title compound, C(16)H(8)N(6), lie on crystallographic inversion centres. A dihedral angle of 16.1 (1)° is formed between the central tetra-zine ring and the plane of each cyano-phenyl group. The mol-ecules form stacks along [100] with a perpendicular inter-planar separation of 3.25 (1) Å. C-H⋯N inter-actions are formed between mol-ecules in neighbouring stacks.

Entities:  

Year:  2009        PMID: 21582544      PMCID: PMC2968976          DOI: 10.1107/S1600536809008599

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For synthesis details, see: Spychała et al. (1994 ▶, 2000 ▶). For related structures and discussion, see: Higashi & Osaki (1981 ▶); Infantes et al. (2003 ▶).

Experimental

Crystal data

C16H8N6 M = 284.28 Monoclinic, a = 4.8447 (5) Å b = 12.1054 (12) Å c = 11.6927 (11) Å β = 94.363 (8)° V = 683.75 (12) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 291 K 0.45 × 0.2 × 0.1 mm

Data collection

Kuma KM-4-CCD diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007 ▶) T min = 0.925, T max = 0.991 5912 measured reflections 1768 independent reflections 1094 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.135 S = 1.06 1768 reflections 116 parameters All H-atom parameters refined Δρmax = 0.16 e Å−3 Δρmin = −0.13 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2007 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Stereochemical Workstation Operation Manual (Siemens, 1989 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809008599/bi2354sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809008599/bi2354Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H8N6F(000) = 292
Mr = 284.28Dx = 1.381 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2059 reflections
a = 4.8447 (5) Åθ = 2.4–29.6°
b = 12.1054 (12) ŵ = 0.09 mm1
c = 11.6927 (11) ÅT = 291 K
β = 94.363 (8)°Block, orange
V = 683.75 (12) Å30.45 × 0.2 × 0.1 mm
Z = 2
Kuma KM-4-CCD diffractometer1768 independent reflections
Radiation source: fine-focus sealed tube1094 reflections with I > 2σ(I)
graphiteRint = 0.017
Detector resolution: 8.1929 pixels mm-1θmax = 29.7°, θmin = 3.4°
ω scansh = −6→6
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007)k = −16→15
Tmin = 0.925, Tmax = 0.991l = −15→14
5912 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: difference Fourier map
wR(F2) = 0.135All H-atom parameters refined
S = 1.06w = 1/[σ2(Fo2) + (0.0683P)2 + 0.0311P] where P = (Fo2 + 2Fc2)/3
1768 reflections(Δ/σ)max < 0.001
116 parametersΔρmax = 0.16 e Å3
0 restraintsΔρmin = −0.13 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N1−0.2003 (2)0.01444 (9)−0.08623 (10)0.0532 (4)
N2−0.0256 (2)0.09630 (9)−0.05942 (10)0.0528 (4)
C30.1693 (2)0.07922 (10)0.02639 (10)0.0418 (3)
C40.3614 (2)0.17078 (10)0.05676 (11)0.0434 (3)
C50.3849 (3)0.25828 (12)−0.01845 (13)0.0546 (4)
C60.5664 (3)0.34327 (13)0.00878 (14)0.0596 (4)
C70.7235 (3)0.34205 (12)0.11308 (13)0.0542 (4)
C80.7010 (3)0.25569 (14)0.18883 (14)0.0626 (5)
C90.5218 (3)0.16937 (13)0.16039 (13)0.0564 (4)
C100.9104 (3)0.43269 (15)0.14189 (14)0.0682 (5)
N101.0547 (4)0.50498 (14)0.16340 (14)0.0986 (6)
H60.588 (3)0.4047 (13)−0.0455 (16)0.080 (5)*
H50.271 (3)0.2606 (13)−0.0895 (14)0.065 (4)*
H80.811 (3)0.2535 (13)0.2601 (15)0.078 (5)*
H90.509 (3)0.1054 (14)0.2128 (14)0.076 (5)*
U11U22U33U12U13U23
N10.0548 (7)0.0474 (7)0.0549 (7)−0.0081 (5)−0.0131 (5)0.0051 (5)
N20.0546 (7)0.0469 (7)0.0542 (7)−0.0070 (5)−0.0128 (5)0.0056 (5)
C30.0429 (7)0.0433 (7)0.0388 (7)−0.0019 (6)0.0003 (5)−0.0008 (5)
C40.0423 (7)0.0441 (7)0.0433 (7)−0.0026 (6)−0.0005 (5)−0.0012 (6)
C50.0578 (8)0.0545 (9)0.0496 (8)−0.0100 (7)−0.0075 (6)0.0061 (7)
C60.0670 (10)0.0537 (9)0.0572 (9)−0.0152 (8)−0.0005 (7)0.0056 (7)
C70.0534 (8)0.0538 (9)0.0553 (9)−0.0146 (7)0.0033 (6)−0.0068 (7)
C80.0640 (9)0.0719 (10)0.0494 (8)−0.0190 (8)−0.0114 (7)0.0007 (8)
C90.0620 (9)0.0566 (9)0.0487 (8)−0.0149 (7)−0.0086 (7)0.0060 (7)
C100.0749 (10)0.0741 (11)0.0554 (9)−0.0259 (9)0.0034 (8)−0.0063 (8)
N100.1182 (13)0.1029 (13)0.0742 (11)−0.0672 (11)0.0037 (9)−0.0105 (9)
N1—N21.3254 (14)C6—C71.388 (2)
N1—C3i1.3347 (17)C6—H60.989 (17)
N2—C31.3403 (17)C7—C81.380 (2)
C3—N1i1.3347 (17)C7—C101.446 (2)
C3—C41.4735 (17)C8—C91.383 (2)
C4—C51.3869 (19)C8—H80.955 (17)
C4—C91.3888 (18)C9—H90.993 (17)
C5—C61.375 (2)C10—N101.1360 (18)
C5—H50.962 (16)
N2—N1—C3i117.81 (11)C5—C6—H6120.8 (10)
N1—N2—C3117.55 (11)C7—C6—H6119.6 (10)
N1i—C3—N2124.64 (11)C8—C7—C6120.49 (13)
N1i—C3—C4117.94 (11)C8—C7—C10120.27 (13)
N2—C3—C4117.42 (11)C6—C7—C10119.25 (14)
C5—C4—C9119.68 (12)C7—C8—C9119.80 (14)
C5—C4—C3120.17 (12)C7—C8—H8121.0 (10)
C9—C4—C3120.15 (12)C9—C8—H8119.1 (10)
C6—C5—C4120.43 (13)C8—C9—C4119.99 (14)
C6—C5—H5119.6 (9)C8—C9—H9120.7 (10)
C4—C5—H5120.0 (9)C4—C9—H9119.4 (10)
C5—C6—C7119.60 (14)N10—C10—C7178.9 (2)
C3i—N1—N2—C3−0.3 (2)C4—C5—C6—C7−1.0 (2)
N1—N2—C3—N1i0.3 (2)C5—C6—C7—C80.7 (2)
N1—N2—C3—C4−179.39 (11)C5—C6—C7—C10−178.94 (15)
N1i—C3—C4—C5164.01 (13)C6—C7—C8—C90.4 (3)
N2—C3—C4—C5−16.25 (19)C10—C7—C8—C9−179.95 (15)
N1i—C3—C4—C9−15.40 (19)C7—C8—C9—C4−1.2 (3)
N2—C3—C4—C9164.34 (13)C5—C4—C9—C80.9 (2)
C9—C4—C5—C60.2 (2)C3—C4—C9—C8−179.71 (14)
C3—C4—C5—C6−179.18 (13)
D—H···AD—HH···AD···AD—H···A
C6—H6···N10ii0.989 (17)2.539 (17)3.370 (2)141.6 (13)
C8—H8···N2iii0.956 (17)2.850 (17)3.6106 (19)137.2 (12)
C9—H9···N10iv0.993 (17)2.754 (17)3.431 (2)125.8 (12)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6⋯N10i0.989 (17)2.539 (17)3.370 (2)141.6 (13)
C8—H8⋯N2ii0.956 (17)2.850 (17)3.6106 (19)137.2 (12)
C9—H9⋯N10iii0.993 (17)2.754 (17)3.431 (2)125.8 (12)

Symmetry codes: (i) ; (ii) ; (iii) .

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