Literature DB >> 21582529

Dimethyl cis-2-methyl-3-p-tolyl-isoxazolidine-4,5-dicarboxyl-ate.

Mustafa Odabaşoğlu, Hamdi Ozkan, Yılmaz Yıldırır, Orhan Büyükgüngör.   

Abstract

In the mol-ecule of the title compound, C(15)H(19)NO(5), the isoxazole ring adopts an envelope conformation. In the crystal structure, weak inter-molecular C-H⋯O and C-H⋯N hydrogen bonds link the mol-ecules, in which they may be effective in the stabilization of the structure.

Entities:  

Year:  2009        PMID: 21582529      PMCID: PMC2968888          DOI: 10.1107/S1600536809009350

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Tufariello (1984 ▶); Villamena & Zweier (2004 ▶); Halliwell (2001a ▶,b ▶); Zweier & Talukder (2006 ▶); Janzen (1971 ▶, 1980 ▶); Janzen & Haire (1990 ▶); Villamena et al. (2007 ▶); Floyd & Hensley (2000 ▶); Inanami & Kuwabara (1995 ▶); Becker et al. (2002 ▶). For bond-length data, see: Allen et al. (1987 ▶). For the preparation of N-Methyl-C-(-4-methylphenyl) nitrone, used in the synthesis, see: Heaney et al. (2001 ▶). For 1,3-dipolar cycloaddition of nitrones and alkenes, see: Confalone & Huie (1988 ▶); Torssell (1988 ▶); Frederickson (1997 ▶); Gothelf & Jorgensen (1998 ▶).

Experimental

Crystal data

C15H19NO5 M = 293.31 Orthorhombic, a = 15.3832 (7) Å b = 19.7959 (8) Å c = 9.9612 (3) Å V = 3033.4 (2) Å3 Z = 8 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.78 × 0.45 × 0.27 mm

Data collection

Stoe IPDS-2 diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.973, T max = 0.989 11187 measured reflections 1672 independent reflections 1554 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.074 S = 1.07 1672 reflections 192 parameters 1 restraint H-atom parameters constrained Δρmax = 0.11 e Å−3 Δρmin = −0.10 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809009350/hk2635sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809009350/hk2635Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H19NO5F(000) = 1248
Mr = 293.31Dx = 1.285 Mg m3
Orthorhombic, Ccc2Mo Kα radiation, λ = 0.71073 Å
Hall symbol: C 2 -2cCell parameters from 11187 reflections
a = 15.3832 (7) Åθ = 1.7–28.0°
b = 19.7959 (8) ŵ = 0.10 mm1
c = 9.9612 (3) ÅT = 296 K
V = 3033.4 (2) Å3Prism, colorless
Z = 80.78 × 0.45 × 0.27 mm
Stoe IPDS-2 diffractometer1672 independent reflections
Radiation source: sealed X-ray tube1554 reflections with I > 2σ(I)
plane graphiteRint = 0.026
Detector resolution: 6.67 pixels mm-1θmax = 26.5°, θmin = 1.7°
ω scan rotation methodh = −18→19
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)k = −24→24
Tmin = 0.973, Tmax = 0.989l = −12→12
11187 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.027H-atom parameters constrained
wR(F2) = 0.074w = 1/[σ2(Fo2) + (0.0483P)2 + 0.1649P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.001
1672 reflectionsΔρmax = 0.11 e Å3
192 parametersΔρmin = −0.10 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0024 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.43759 (8)0.40270 (6)0.68227 (16)0.0583 (4)
O20.61162 (9)0.28606 (7)0.63405 (15)0.0577 (3)
O30.60989 (9)0.22965 (7)0.82785 (15)0.0585 (3)
O40.66458 (9)0.42093 (7)0.75011 (16)0.0626 (4)
O50.58517 (8)0.43642 (7)0.56403 (14)0.0578 (3)
N10.41179 (9)0.33370 (7)0.64475 (16)0.0485 (3)
C10.41288 (11)0.22248 (9)0.75835 (19)0.0465 (4)
C20.43264 (13)0.18797 (10)0.6418 (2)0.0555 (4)
H20.45300.21140.56720.067*
C30.42216 (14)0.11819 (11)0.6357 (3)0.0647 (5)
H30.43520.09580.55610.078*
C40.39317 (13)0.08153 (10)0.7437 (3)0.0650 (6)
C50.37474 (15)0.11654 (12)0.8606 (3)0.0680 (6)
H50.35610.09280.93580.082*
C60.38338 (14)0.18582 (11)0.8680 (2)0.0598 (5)
H60.36930.20810.94720.072*
C70.37937 (18)0.00580 (14)0.7372 (5)0.0968 (10)
H7A0.3207−0.00460.76260.145*
H7B0.4189−0.01620.79750.145*
H7C0.3897−0.00970.64720.145*
C80.42456 (11)0.29783 (9)0.77189 (18)0.0460 (4)
H80.38250.31490.83760.055*
C90.51660 (11)0.32237 (8)0.81227 (17)0.0459 (4)
H90.52350.32150.91010.055*
C100.51412 (11)0.39570 (8)0.76058 (19)0.0494 (4)
H100.50710.42490.83930.059*
C110.32106 (12)0.33992 (12)0.6060 (3)0.0650 (5)
H11A0.31710.36380.52230.097*
H11B0.29000.36440.67400.097*
H11C0.29620.29570.59600.097*
C120.58471 (11)0.27910 (8)0.74591 (19)0.0461 (4)
C130.66586 (15)0.17845 (11)0.7714 (3)0.0746 (6)
H13A0.67990.14580.83920.112*
H13B0.71830.19910.73920.112*
H13C0.63660.15650.69840.112*
C140.59637 (11)0.41814 (8)0.6902 (2)0.0475 (4)
C150.66179 (16)0.46013 (14)0.4967 (3)0.0802 (7)
H15A0.64750.47230.40600.120*
H15B0.70490.42500.49600.120*
H15C0.68430.49890.54290.120*
U11U22U33U12U13U23
O10.0479 (6)0.0423 (6)0.0848 (10)0.0013 (5)−0.0049 (6)0.0057 (7)
O20.0693 (8)0.0515 (7)0.0524 (7)0.0065 (6)0.0100 (7)−0.0007 (6)
O30.0641 (8)0.0521 (7)0.0592 (8)0.0095 (6)−0.0029 (7)0.0078 (6)
O40.0535 (7)0.0669 (8)0.0674 (8)−0.0085 (6)−0.0091 (6)−0.0009 (7)
O50.0556 (7)0.0574 (8)0.0606 (8)−0.0062 (6)−0.0025 (6)0.0096 (6)
N10.0461 (7)0.0452 (7)0.0541 (9)−0.0016 (5)−0.0002 (6)0.0047 (7)
C10.0465 (8)0.0466 (8)0.0465 (9)−0.0038 (6)−0.0023 (7)0.0022 (8)
C20.0653 (11)0.0513 (9)0.0500 (9)−0.0020 (8)0.0027 (9)−0.0002 (9)
C30.0672 (11)0.0546 (11)0.0724 (13)−0.0016 (9)−0.0039 (11)−0.0135 (11)
C40.0526 (10)0.0491 (10)0.0935 (16)−0.0068 (7)−0.0156 (10)0.0032 (11)
C50.0703 (13)0.0613 (12)0.0725 (13)−0.0159 (10)−0.0026 (11)0.0182 (11)
C60.0674 (12)0.0619 (11)0.0500 (9)−0.0133 (9)0.0033 (9)0.0035 (9)
C70.0854 (15)0.0517 (11)0.153 (3)−0.0127 (11)−0.0152 (19)−0.0036 (16)
C80.0474 (8)0.0463 (9)0.0442 (8)−0.0017 (6)0.0061 (7)−0.0014 (7)
C90.0532 (9)0.0448 (8)0.0398 (8)−0.0009 (7)0.0006 (7)−0.0031 (7)
C100.0517 (9)0.0423 (8)0.0541 (9)0.0011 (6)0.0027 (8)−0.0073 (8)
C110.0483 (9)0.0661 (12)0.0806 (14)−0.0008 (8)−0.0074 (10)0.0108 (10)
C120.0479 (8)0.0416 (8)0.0489 (9)−0.0023 (6)−0.0026 (8)−0.0011 (8)
C130.0717 (13)0.0527 (11)0.0995 (18)0.0172 (9)−0.0032 (13)0.0027 (12)
C140.0491 (9)0.0384 (7)0.0549 (9)−0.0022 (6)−0.0027 (8)−0.0046 (8)
C150.0757 (14)0.0924 (16)0.0726 (15)−0.0240 (12)0.0079 (12)0.0166 (14)
C1—C21.381 (3)C10—O11.419 (2)
C1—C61.387 (3)C10—C141.513 (3)
C1—C81.508 (2)C10—H100.9800
C2—C31.392 (3)C11—N11.453 (2)
C2—H20.9300C11—H11A0.9600
C3—C41.373 (4)C11—H11B0.9600
C3—H30.9300C11—H11C0.9600
C4—C51.384 (4)C12—O21.197 (2)
C4—C71.515 (3)C12—O31.332 (2)
C5—C61.380 (3)C13—O31.444 (3)
C5—H50.9300C13—H13A0.9600
C6—H60.9300C13—H13B0.9600
C7—H7A0.9600C13—H13C0.9600
C7—H7B0.9600C14—O41.209 (2)
C7—H7C0.9600C14—O51.319 (2)
C8—N11.465 (2)C15—O51.435 (3)
C8—C91.550 (2)C15—H15A0.9600
C8—H80.9800C15—H15B0.9600
C9—C121.506 (2)C15—H15C0.9600
C9—C101.541 (2)N1—O11.4707 (19)
C9—H90.9800
C2—C1—C6118.35 (17)O1—C10—C14114.22 (15)
C2—C1—C8122.56 (16)O1—C10—C9107.23 (13)
C6—C1—C8119.07 (17)C14—C10—C9114.25 (13)
C1—C2—C3120.1 (2)O1—C10—H10106.9
C1—C2—H2119.9C14—C10—H10106.9
C3—C2—H2119.9C9—C10—H10106.9
C4—C3—C2121.9 (2)N1—C11—H11A109.5
C4—C3—H3119.1N1—C11—H11B109.5
C2—C3—H3119.1H11A—C11—H11B109.5
C3—C4—C5117.47 (18)N1—C11—H11C109.5
C3—C4—C7122.3 (3)H11A—C11—H11C109.5
C5—C4—C7120.2 (3)H11B—C11—H11C109.5
C6—C5—C4121.5 (2)O2—C12—O3123.68 (17)
C6—C5—H5119.2O2—C12—C9125.72 (17)
C4—C5—H5119.2O3—C12—C9110.57 (16)
C5—C6—C1120.6 (2)O3—C13—H13A109.5
C5—C6—H6119.7O3—C13—H13B109.5
C1—C6—H6119.7H13A—C13—H13B109.5
C4—C7—H7A109.5O3—C13—H13C109.5
C4—C7—H7B109.5H13A—C13—H13C109.5
H7A—C7—H7B109.5H13B—C13—H13C109.5
C4—C7—H7C109.5O4—C14—O5124.86 (18)
H7A—C7—H7C109.5O4—C14—C10120.68 (18)
H7B—C7—H7C109.5O5—C14—C10114.39 (15)
N1—C8—C1112.71 (14)O5—C15—H15A109.5
N1—C8—C9101.23 (13)O5—C15—H15B109.5
C1—C8—C9116.23 (14)H15A—C15—H15B109.5
N1—C8—H8108.8O5—C15—H15C109.5
C1—C8—H8108.8H15A—C15—H15C109.5
C9—C8—H8108.8H15B—C15—H15C109.5
C12—C9—C10113.98 (14)C11—N1—C8113.54 (15)
C12—C9—C8110.07 (13)C11—N1—O1104.36 (14)
C10—C9—C8100.72 (13)C8—N1—O1101.21 (13)
C12—C9—H9110.6C10—O1—N1105.84 (11)
C10—C9—H9110.6C12—O3—C13116.79 (18)
C8—C9—H9110.6C14—O5—C15115.34 (17)
C6—C1—C2—C30.5 (3)C8—C9—C10—C14−137.37 (16)
C8—C1—C2—C3178.76 (17)C10—C9—C12—O2−29.1 (3)
C1—C2—C3—C4−0.7 (3)C8—C9—C12—O283.2 (2)
C2—C3—C4—C5−0.2 (3)C10—C9—C12—O3152.90 (14)
C2—C3—C4—C7178.4 (2)C8—C9—C12—O3−94.81 (17)
C3—C4—C5—C61.3 (3)O1—C10—C14—O4172.80 (15)
C7—C4—C5—C6−177.4 (2)C9—C10—C14—O4−63.2 (2)
C4—C5—C6—C1−1.4 (3)O1—C10—C14—O5−4.3 (2)
C2—C1—C6—C50.5 (3)C9—C10—C14—O5119.63 (16)
C8—C1—C6—C5−177.80 (18)C1—C8—N1—C1175.72 (19)
C2—C1—C8—N131.2 (2)C9—C8—N1—C11−159.42 (16)
C6—C1—C8—N1−150.60 (17)C1—C8—N1—O1−173.05 (13)
C2—C1—C8—C9−85.0 (2)C9—C8—N1—O1−48.19 (14)
C6—C1—C8—C993.2 (2)C14—C10—O1—N1107.82 (15)
N1—C8—C9—C12−85.19 (15)C9—C10—O1—N1−19.84 (17)
C1—C8—C9—C1237.3 (2)C11—N1—O1—C10161.41 (16)
N1—C8—C9—C1035.45 (15)C8—N1—O1—C1043.31 (16)
C1—C8—C9—C10157.90 (15)O2—C12—O3—C13−6.6 (3)
C12—C9—C10—O1108.09 (17)C9—C12—O3—C13171.52 (16)
C8—C9—C10—O1−9.72 (16)O4—C14—O5—C150.9 (3)
C12—C9—C10—C14−19.6 (2)C10—C14—O5—C15177.92 (18)
D—H···AD—HH···AD···AD—H···A
C2—H2···O3i0.932.603.300 (2)133
C6—H6···O2ii0.932.443.312 (3)157
C9—H9···N1ii0.982.553.497 (2)162
C10—H10···O5ii0.982.663.481 (2)142
C15—H15a···O4iii0.962.643.403 (3)137
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯O3i0.932.603.300 (2)133
C6—H6⋯O2ii0.932.443.312 (3)157
C9—H9⋯N1ii0.982.553.497 (2)162
C10—H10⋯O5ii0.982.663.481 (2)142
C15—H15a⋯O4iii0.962.643.403 (3)137

Symmetry codes: (i) ; (ii) ; (iii) .

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