| Literature DB >> 21582508 |
Hongqi Li, H S Yathirajan, L Mallesha, K N Mohana, B Narayana.
Abstract
The title compound {systematic name: [1-(carboxy-meth-yl)cyclo-hexyl]methanaminium 2,4,6-trinitro-phenolate}, C(9)H(18)NO(2) (+)·C(6)H(2)N(3)O(7) (-), was synthesized from picric acid and gabapentin. The crystal packing is stabilized by intra-molecular N-H⋯O=N and N-H⋯O-Ph hydrogen bonds. An O-H⋯O inter-action is also present.Entities:
Year: 2009 PMID: 21582508 PMCID: PMC2969093 DOI: 10.1107/S1600536809008952
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H18NO2+·C6H2N3O7− | |
| Monoclinic, | Melting point = 431–434 K |
| Hall symbol: -P 2yn | Mo |
| Cell parameters from 2666 reflections | |
| θ = 2.8–25.1° | |
| µ = 0.12 mm−1 | |
| β = 91.425 (2)° | |
| Block, yellow | |
| 0.25 × 0.25 × 0.20 mm |
| Bruker SMART CCD area-detector diffractometer | 3150 independent reflections |
| Radiation source: fine-focus sealed tube | 2408 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.1°, θmin = 2.8° |
| Absorption correction: multi-scan ( | |
| 8899 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3150 reflections | Δρmax = 1.06 e Å−3 |
| 256 parameters | Δρmin = −0.55 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.075 (5) |
| C1 | 0.2919 (2) | 0.3970 (4) | 0.05392 (13) | 0.0375 (6) | |
| C2 | 0.3067 (2) | 0.5162 (3) | 0.10930 (13) | 0.0362 (6) | |
| C3 | 0.3639 (2) | 0.6728 (3) | 0.08832 (16) | 0.0432 (7) | |
| C4 | 0.3949 (2) | 0.7066 (4) | 0.02348 (17) | 0.0499 (8) | |
| H4 | 0.4323 | 0.8093 | 0.0131 | 0.060* | |
| C5 | 0.3701 (2) | 0.5869 (4) | −0.02563 (15) | 0.0466 (8) | |
| C6 | 0.3199 (2) | 0.4315 (4) | −0.01060 (14) | 0.0433 (7) | |
| H6 | 0.3052 | 0.3503 | −0.0441 | 0.052* | |
| C7 | 0.4810 (2) | 0.6530 (3) | 0.67642 (12) | 0.0328 (6) | |
| C8 | 0.5192 (2) | 0.4847 (3) | 0.71209 (13) | 0.0372 (6) | |
| H8A | 0.6030 | 0.4811 | 0.7144 | 0.045* | |
| H8B | 0.4920 | 0.4871 | 0.7576 | 0.045* | |
| C9 | 0.4752 (3) | 0.3205 (4) | 0.67810 (17) | 0.0521 (8) | |
| H9A | 0.5112 | 0.3084 | 0.6350 | 0.063* | |
| H9B | 0.4972 | 0.2213 | 0.7053 | 0.063* | |
| C10 | 0.3458 (3) | 0.3223 (5) | 0.6679 (2) | 0.0727 (11) | |
| H10A | 0.3093 | 0.3214 | 0.7111 | 0.087* | |
| H10B | 0.3216 | 0.2192 | 0.6437 | 0.087* | |
| C11 | 0.3074 (3) | 0.4818 (5) | 0.6289 (2) | 0.0664 (10) | |
| H11A | 0.2237 | 0.4833 | 0.6247 | 0.080* | |
| H11B | 0.3381 | 0.4771 | 0.5842 | 0.080* | |
| C12 | 0.3490 (3) | 0.6467 (4) | 0.66370 (16) | 0.0502 (8) | |
| H12A | 0.3109 | 0.6569 | 0.7062 | 0.060* | |
| H12B | 0.3261 | 0.7453 | 0.6364 | 0.060* | |
| C13 | 0.5043 (3) | 0.8069 (4) | 0.72276 (14) | 0.0429 (7) | |
| H13A | 0.4866 | 0.9122 | 0.6982 | 0.051* | |
| H13B | 0.4517 | 0.8003 | 0.7597 | 0.051* | |
| C14 | 0.5472 (2) | 0.6665 (3) | 0.61064 (12) | 0.0354 (6) | |
| H14A | 0.6290 | 0.6669 | 0.6222 | 0.042* | |
| H14B | 0.5319 | 0.5615 | 0.5853 | 0.042* | |
| C15 | 0.5244 (2) | 0.8160 (3) | 0.56474 (13) | 0.0365 (6) | |
| N1 | 0.2450 (3) | 0.2259 (3) | 0.06681 (13) | 0.0530 (7) | |
| N2 | 0.3944 (3) | 0.8022 (3) | 0.13862 (17) | 0.0582 (8) | |
| N3 | 0.4040 (2) | 0.6182 (5) | −0.09448 (17) | 0.0633 (9) | |
| N4 | 0.6251 (2) | 0.8199 (3) | 0.75081 (12) | 0.0490 (7) | |
| H4A | 0.6443 | 0.7210 | 0.7710 | 0.074* | |
| H4B | 0.6292 | 0.9060 | 0.7803 | 0.074* | |
| H4C | 0.6734 | 0.8404 | 0.7178 | 0.074* | |
| O1 | 0.1815 (4) | 0.1631 (5) | 0.02309 (16) | 0.1380 (18) | |
| O2 | 0.2579 (2) | 0.1585 (3) | 0.11974 (12) | 0.0681 (8) | |
| O3 | 0.2754 (2) | 0.4861 (3) | 0.16754 (10) | 0.0492 (6) | |
| O4 | 0.3311 (2) | 0.8242 (3) | 0.18624 (13) | 0.0638 (7) | |
| O5 | 0.4804 (3) | 0.8876 (4) | 0.1315 (2) | 0.1066 (12) | |
| O6 | 0.4584 (2) | 0.7510 (5) | −0.10551 (16) | 0.0911 (10) | |
| O7 | 0.3773 (3) | 0.5105 (5) | −0.13704 (14) | 0.0893 (10) | |
| O8 | 0.4688 (2) | 0.9447 (3) | 0.57786 (10) | 0.0609 (7) | |
| O9 | 0.5759 (2) | 0.7959 (3) | 0.50733 (11) | 0.0616 (7) | |
| H9 | 0.5576 | 0.8754 | 0.4820 | 0.092* |
| C1 | 0.0436 (15) | 0.0344 (14) | 0.0344 (14) | −0.0022 (12) | −0.0046 (11) | 0.0041 (11) |
| C2 | 0.0400 (14) | 0.0318 (14) | 0.0364 (15) | 0.0020 (11) | −0.0054 (11) | 0.0019 (11) |
| C3 | 0.0420 (15) | 0.0297 (14) | 0.0575 (18) | −0.0008 (12) | −0.0075 (13) | 0.0030 (13) |
| C4 | 0.0384 (16) | 0.0382 (16) | 0.073 (2) | 0.0036 (13) | 0.0079 (14) | 0.0239 (16) |
| C5 | 0.0394 (15) | 0.0549 (19) | 0.0457 (16) | 0.0112 (14) | 0.0059 (12) | 0.0156 (15) |
| C6 | 0.0428 (16) | 0.0514 (18) | 0.0356 (15) | 0.0031 (13) | −0.0026 (12) | 0.0021 (13) |
| C7 | 0.0415 (14) | 0.0297 (13) | 0.0271 (13) | 0.0035 (11) | 0.0006 (10) | 0.0015 (10) |
| C8 | 0.0490 (16) | 0.0323 (14) | 0.0301 (14) | −0.0001 (12) | −0.0014 (11) | 0.0044 (11) |
| C9 | 0.073 (2) | 0.0313 (16) | 0.0520 (18) | −0.0097 (15) | −0.0040 (15) | 0.0041 (13) |
| C10 | 0.076 (3) | 0.058 (2) | 0.084 (3) | −0.031 (2) | 0.002 (2) | 0.004 (2) |
| C11 | 0.0460 (19) | 0.078 (3) | 0.074 (2) | −0.0127 (18) | −0.0084 (16) | −0.001 (2) |
| C12 | 0.0416 (16) | 0.059 (2) | 0.0505 (18) | 0.0065 (14) | 0.0054 (13) | 0.0072 (15) |
| C13 | 0.0624 (19) | 0.0337 (15) | 0.0325 (14) | 0.0073 (13) | 0.0012 (13) | −0.0009 (11) |
| C14 | 0.0466 (15) | 0.0311 (14) | 0.0285 (13) | 0.0016 (11) | 0.0016 (11) | 0.0015 (10) |
| C15 | 0.0480 (16) | 0.0346 (15) | 0.0268 (13) | −0.0010 (12) | −0.0009 (11) | 0.0005 (11) |
| N1 | 0.0781 (19) | 0.0435 (15) | 0.0369 (14) | −0.0202 (13) | −0.0054 (12) | −0.0054 (12) |
| N2 | 0.0603 (17) | 0.0320 (14) | 0.082 (2) | −0.0054 (13) | −0.0139 (16) | −0.0025 (14) |
| N3 | 0.0510 (16) | 0.078 (2) | 0.0612 (19) | 0.0195 (16) | 0.0141 (14) | 0.0320 (18) |
| N4 | 0.0808 (19) | 0.0321 (13) | 0.0337 (13) | −0.0104 (12) | −0.0085 (12) | −0.0038 (10) |
| O1 | 0.240 (5) | 0.111 (3) | 0.0613 (19) | −0.105 (3) | −0.031 (2) | 0.0042 (18) |
| O2 | 0.0992 (19) | 0.0492 (14) | 0.0547 (15) | −0.0240 (13) | −0.0203 (13) | 0.0170 (11) |
| O3 | 0.0769 (15) | 0.0367 (11) | 0.0340 (11) | −0.0009 (10) | 0.0009 (10) | 0.0000 (8) |
| O4 | 0.0849 (18) | 0.0401 (13) | 0.0655 (16) | 0.0009 (12) | −0.0174 (14) | −0.0124 (11) |
| O5 | 0.089 (2) | 0.072 (2) | 0.159 (3) | −0.0438 (18) | 0.005 (2) | −0.029 (2) |
| O6 | 0.0774 (19) | 0.101 (2) | 0.096 (2) | 0.0071 (17) | 0.0278 (16) | 0.0562 (19) |
| O7 | 0.106 (2) | 0.116 (3) | 0.0471 (15) | 0.016 (2) | 0.0227 (15) | 0.0115 (17) |
| O8 | 0.1037 (19) | 0.0422 (13) | 0.0375 (12) | 0.0242 (13) | 0.0137 (11) | 0.0090 (10) |
| O9 | 0.0925 (18) | 0.0544 (14) | 0.0389 (12) | 0.0224 (13) | 0.0198 (11) | 0.0148 (10) |
| C1—C6 | 1.363 (4) | C10—H10B | 0.9700 |
| C1—C2 | 1.447 (4) | C11—C12 | 1.524 (5) |
| C1—N1 | 1.455 (4) | C11—H11A | 0.9700 |
| C2—O3 | 1.249 (3) | C11—H11B | 0.9700 |
| C2—C3 | 1.447 (4) | C12—H12A | 0.9700 |
| C3—C4 | 1.377 (4) | C12—H12B | 0.9700 |
| C3—N2 | 1.455 (4) | C13—N4 | 1.497 (4) |
| C4—C5 | 1.374 (5) | C13—H13A | 0.9700 |
| C4—H4 | 0.9300 | C13—H13B | 0.9700 |
| C5—C6 | 1.371 (4) | C14—C15 | 1.495 (4) |
| C5—N3 | 1.460 (4) | C14—H14A | 0.9700 |
| C6—H6 | 0.9300 | C14—H14B | 0.9700 |
| C7—C13 | 1.527 (4) | C15—O8 | 1.217 (3) |
| C7—C14 | 1.541 (3) | C15—O9 | 1.314 (3) |
| C7—C8 | 1.543 (3) | N1—O2 | 1.185 (3) |
| C7—C12 | 1.544 (4) | N1—O1 | 1.228 (4) |
| C8—C9 | 1.522 (4) | N2—O5 | 1.205 (4) |
| C8—H8A | 0.9700 | N2—O4 | 1.227 (4) |
| C8—H8B | 0.9700 | N3—O7 | 1.225 (4) |
| C9—C10 | 1.506 (5) | N3—O6 | 1.227 (4) |
| C9—H9A | 0.9700 | N4—H4A | 0.8900 |
| C9—H9B | 0.9700 | N4—H4B | 0.8900 |
| C10—C11 | 1.520 (5) | N4—H4C | 0.8900 |
| C10—H10A | 0.9700 | O9—H9 | 0.8200 |
| C6—C1—C2 | 124.9 (3) | C10—C11—H11A | 109.4 |
| C6—C1—N1 | 116.3 (3) | C12—C11—H11A | 109.4 |
| C2—C1—N1 | 118.8 (2) | C10—C11—H11B | 109.4 |
| O3—C2—C1 | 124.2 (2) | C12—C11—H11B | 109.4 |
| O3—C2—C3 | 124.8 (3) | H11A—C11—H11B | 108.0 |
| C1—C2—C3 | 111.0 (2) | C11—C12—C7 | 113.7 (3) |
| C4—C3—C2 | 124.2 (3) | C11—C12—H12A | 108.8 |
| C4—C3—N2 | 117.0 (3) | C7—C12—H12A | 108.8 |
| C2—C3—N2 | 118.7 (3) | C11—C12—H12B | 108.8 |
| C5—C4—C3 | 119.3 (3) | C7—C12—H12B | 108.8 |
| C5—C4—H4 | 120.4 | H12A—C12—H12B | 107.7 |
| C3—C4—H4 | 120.4 | N4—C13—C7 | 115.4 (2) |
| C6—C5—C4 | 121.1 (3) | N4—C13—H13A | 108.4 |
| C6—C5—N3 | 118.5 (3) | C7—C13—H13A | 108.4 |
| C4—C5—N3 | 120.3 (3) | N4—C13—H13B | 108.4 |
| C1—C6—C5 | 119.4 (3) | C7—C13—H13B | 108.4 |
| C1—C6—H6 | 120.3 | H13A—C13—H13B | 107.5 |
| C5—C6—H6 | 120.3 | C15—C14—C7 | 119.4 (2) |
| C13—C7—C14 | 112.4 (2) | C15—C14—H14A | 107.5 |
| C13—C7—C8 | 109.4 (2) | C7—C14—H14A | 107.5 |
| C14—C7—C8 | 107.9 (2) | C15—C14—H14B | 107.5 |
| C13—C7—C12 | 106.5 (2) | C7—C14—H14B | 107.5 |
| C14—C7—C12 | 111.9 (2) | H14A—C14—H14B | 107.0 |
| C8—C7—C12 | 108.7 (2) | O8—C15—O9 | 122.6 (2) |
| C9—C8—C7 | 114.1 (2) | O8—C15—C14 | 125.9 (2) |
| C9—C8—H8A | 108.7 | O9—C15—C14 | 111.5 (2) |
| C7—C8—H8A | 108.7 | O2—N1—O1 | 121.3 (3) |
| C9—C8—H8B | 108.7 | O2—N1—C1 | 121.2 (2) |
| C7—C8—H8B | 108.7 | O1—N1—C1 | 117.0 (3) |
| H8A—C8—H8B | 107.6 | O5—N2—O4 | 121.8 (3) |
| C10—C9—C8 | 111.9 (3) | O5—N2—C3 | 118.9 (3) |
| C10—C9—H9A | 109.2 | O4—N2—C3 | 119.4 (3) |
| C8—C9—H9A | 109.2 | O7—N3—O6 | 124.5 (3) |
| C10—C9—H9B | 109.2 | O7—N3—C5 | 118.1 (3) |
| C8—C9—H9B | 109.2 | O6—N3—C5 | 117.3 (4) |
| H9A—C9—H9B | 107.9 | C13—N4—H4A | 109.5 |
| C9—C10—C11 | 110.7 (3) | C13—N4—H4B | 109.5 |
| C9—C10—H10A | 109.5 | H4A—N4—H4B | 109.5 |
| C11—C10—H10A | 109.5 | C13—N4—H4C | 109.5 |
| C9—C10—H10B | 109.5 | H4A—N4—H4C | 109.5 |
| C11—C10—H10B | 109.5 | H4B—N4—H4C | 109.5 |
| H10A—C10—H10B | 108.1 | C15—O9—H9 | 109.5 |
| C10—C11—C12 | 111.0 (3) |
| H··· | ||||
| O9—H9···O8i | 0.82 | 1.86 | 2.672 (3) | 174 |
| N4—H4C···O4ii | 0.89 | 2.32 | 2.957 (4) | 128 |
| N4—H4C···O3ii | 0.89 | 2.06 | 2.862 (3) | 149 |
| N4—H4B···O2iii | 0.89 | 2.41 | 2.894 (3) | 114 |
| N4—H4B···O4i | 0.89 | 2.23 | 3.063 (3) | 155 |
| N4—H4A···O3iii | 0.89 | 2.21 | 3.081 (3) | 166 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O9—H9⋯O8i | 0.82 | 1.86 | 2.672 (3) | 174 |
| N4—H4 | 0.89 | 2.32 | 2.957 (4) | 128 |
| N4—H4 | 0.89 | 2.06 | 2.862 (3) | 149 |
| N4—H4 | 0.89 | 2.41 | 2.894 (3) | 114 |
| N4—H4 | 0.89 | 2.23 | 3.063 (3) | 155 |
| N4—H4 | 0.89 | 2.21 | 3.081 (3) | 166 |
Symmetry codes: (i) ; (ii) ; (iii) .