| Literature DB >> 21582503 |
Julia Heilmann-Brohl, Gérard Jaouen, Michael Bolte.
Abstract
In the title compound, C(11)H(14)O(4), an inter-mediate for the synthesis of a new kind of estrogen receptor modulator, all non-H atoms lie on a common plane (r.m.s. deviation = 0.0472 Å). All C-C bonds in the side chain are in a trans conformation, and the hydroxyl group is also trans to the methyl-ene chain. In the crystal structure, mol-ecules form centrosymmetric dimers showing a head-to-head arrangement which is stabilized by O-H⋯O hydrogen bonds. A weak C-H⋯O contact is also present.Entities:
Year: 2009 PMID: 21582503 PMCID: PMC2968774 DOI: 10.1107/S1600536809008186
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H14O4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 15224 reflections |
| θ = 3.7–29.5° | |
| µ = 0.10 mm−1 | |
| β = 90.822 (5)° | Block, colourless |
| 0.32 × 0.27 × 0.25 mm | |
| Stoe IPDS-II two-circle diffractometer | 2458 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 29.6°, θmin = 3.7° |
| ω scans | |
| 15489 measured reflections | |
| 2945 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 2945 reflections | Δρmax = 0.31 e Å−3 |
| 142 parameters | Δρmin = −0.20 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.048 (5) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.32321 (7) | 0.55314 (15) | 0.64594 (4) | 0.03035 (19) | |
| C1 | 0.36009 (11) | 0.72446 (18) | 0.59488 (5) | 0.0263 (2) | |
| H1A | 0.3840 | 0.6344 | 0.5539 | 0.032* | |
| H1B | 0.4411 | 0.8248 | 0.6091 | 0.032* | |
| C2 | 0.23475 (10) | 0.89015 (19) | 0.58265 (5) | 0.0265 (2) | |
| H2A | 0.2151 | 0.9860 | 0.6232 | 0.032* | |
| H2B | 0.1527 | 0.7866 | 0.5721 | 0.032* | |
| C3 | 0.26116 (11) | 1.0679 (2) | 0.52546 (5) | 0.0286 (2) | |
| H3A | 0.3491 | 1.1572 | 0.5343 | 0.034* | |
| H3B | 0.2727 | 0.9704 | 0.4844 | 0.034* | |
| C4 | 0.14701 (11) | 1.25525 (19) | 0.51430 (5) | 0.0269 (2) | |
| O41 | 0.17803 (9) | 1.41971 (15) | 0.46803 (4) | 0.0342 (2) | |
| H41 | 0.1036 (18) | 1.526 (3) | 0.4617 (8) | 0.056 (5)* | |
| O42 | 0.03810 (8) | 1.25686 (16) | 0.54438 (5) | 0.0382 (2) | |
| C11 | 0.42179 (10) | 0.38789 (18) | 0.66811 (5) | 0.0245 (2) | |
| C12 | 0.55358 (10) | 0.36401 (18) | 0.64103 (5) | 0.0253 (2) | |
| H12 | 0.5814 | 0.4682 | 0.6058 | 0.030* | |
| C13 | 0.64437 (10) | 0.18317 (18) | 0.66685 (5) | 0.0243 (2) | |
| C14 | 0.60524 (11) | 0.02991 (19) | 0.71884 (5) | 0.0263 (2) | |
| H14 | 0.6668 | −0.0927 | 0.7358 | 0.032* | |
| C15 | 0.47284 (10) | 0.06066 (19) | 0.74563 (5) | 0.0278 (2) | |
| H15 | 0.4454 | −0.0420 | 0.7813 | 0.033* | |
| C16 | 0.38130 (11) | 0.23721 (19) | 0.72120 (5) | 0.0270 (2) | |
| H16 | 0.2923 | 0.2562 | 0.7401 | 0.032* | |
| O13 | 0.77149 (8) | 0.17389 (15) | 0.63728 (4) | 0.0316 (2) | |
| C17 | 0.86678 (11) | −0.0111 (2) | 0.66159 (5) | 0.0334 (3) | |
| H17A | 0.8863 | 0.0179 | 0.7087 | 0.050* | |
| H17B | 0.9532 | −0.0014 | 0.6369 | 0.050* | |
| H17C | 0.8257 | −0.1758 | 0.6558 | 0.050* |
| O1 | 0.0250 (4) | 0.0310 (4) | 0.0350 (4) | 0.0067 (3) | 0.0021 (3) | 0.0095 (3) |
| C1 | 0.0255 (5) | 0.0255 (5) | 0.0277 (5) | 0.0032 (4) | −0.0012 (4) | 0.0029 (4) |
| C2 | 0.0262 (5) | 0.0251 (5) | 0.0281 (5) | 0.0052 (4) | −0.0032 (4) | 0.0004 (4) |
| C3 | 0.0290 (5) | 0.0275 (5) | 0.0294 (5) | 0.0056 (4) | −0.0011 (4) | 0.0014 (4) |
| C4 | 0.0291 (5) | 0.0247 (5) | 0.0268 (5) | 0.0022 (4) | −0.0036 (4) | 0.0007 (4) |
| O41 | 0.0362 (4) | 0.0313 (4) | 0.0351 (4) | 0.0080 (3) | 0.0025 (3) | 0.0096 (3) |
| O42 | 0.0318 (4) | 0.0371 (5) | 0.0458 (5) | 0.0105 (3) | 0.0055 (4) | 0.0148 (4) |
| C11 | 0.0238 (4) | 0.0231 (4) | 0.0266 (5) | 0.0024 (3) | −0.0027 (4) | 0.0014 (4) |
| C12 | 0.0263 (5) | 0.0255 (5) | 0.0240 (4) | 0.0018 (3) | −0.0002 (3) | 0.0035 (3) |
| C13 | 0.0237 (4) | 0.0257 (4) | 0.0235 (4) | 0.0021 (3) | −0.0008 (3) | −0.0002 (4) |
| C14 | 0.0273 (5) | 0.0250 (5) | 0.0265 (5) | 0.0018 (4) | −0.0033 (4) | 0.0035 (4) |
| C15 | 0.0280 (5) | 0.0282 (5) | 0.0273 (5) | −0.0025 (4) | −0.0011 (4) | 0.0050 (4) |
| C16 | 0.0245 (5) | 0.0286 (5) | 0.0280 (5) | −0.0010 (4) | 0.0002 (4) | 0.0020 (4) |
| O13 | 0.0266 (4) | 0.0380 (4) | 0.0303 (4) | 0.0100 (3) | 0.0048 (3) | 0.0095 (3) |
| C17 | 0.0301 (5) | 0.0382 (6) | 0.0319 (5) | 0.0128 (4) | 0.0026 (4) | 0.0059 (4) |
| O1—C11 | 1.3747 (11) | C11—C16 | 1.4061 (14) |
| O1—C1 | 1.4343 (12) | C12—C13 | 1.4072 (13) |
| C1—C2 | 1.5219 (13) | C12—H12 | 0.9500 |
| C1—H1A | 0.9900 | C13—O13 | 1.3732 (12) |
| C1—H1B | 0.9900 | C13—C14 | 1.3935 (14) |
| C2—C3 | 1.5263 (14) | C14—C15 | 1.4047 (14) |
| C2—H2A | 0.9900 | C14—H14 | 0.9500 |
| C2—H2B | 0.9900 | C15—C16 | 1.3858 (14) |
| C3—C4 | 1.5103 (14) | C15—H15 | 0.9500 |
| C3—H3A | 0.9900 | C16—H16 | 0.9500 |
| C3—H3B | 0.9900 | O13—C17 | 1.4394 (12) |
| C4—O42 | 1.2217 (13) | C17—H17A | 0.9800 |
| C4—O41 | 1.3268 (13) | C17—H17B | 0.9800 |
| O41—H41 | 0.927 (18) | C17—H17C | 0.9800 |
| C11—C12 | 1.3977 (13) | ||
| C11—O1—C1 | 118.38 (8) | O1—C11—C16 | 115.18 (9) |
| O1—C1—C2 | 106.92 (8) | C12—C11—C16 | 120.64 (9) |
| O1—C1—H1A | 110.3 | C11—C12—C13 | 118.96 (9) |
| C2—C1—H1A | 110.3 | C11—C12—H12 | 120.5 |
| O1—C1—H1B | 110.3 | C13—C12—H12 | 120.5 |
| C2—C1—H1B | 110.3 | O13—C13—C14 | 124.03 (9) |
| H1A—C1—H1B | 108.6 | O13—C13—C12 | 114.80 (8) |
| C1—C2—C3 | 110.58 (8) | C14—C13—C12 | 121.16 (9) |
| C1—C2—H2A | 109.5 | C13—C14—C15 | 118.56 (9) |
| C3—C2—H2A | 109.5 | C13—C14—H14 | 120.7 |
| C1—C2—H2B | 109.5 | C15—C14—H14 | 120.7 |
| C3—C2—H2B | 109.5 | C16—C15—C14 | 121.53 (9) |
| H2A—C2—H2B | 108.1 | C16—C15—H15 | 119.2 |
| C4—C3—C2 | 113.88 (9) | C14—C15—H15 | 119.2 |
| C4—C3—H3A | 108.8 | C15—C16—C11 | 119.14 (9) |
| C2—C3—H3A | 108.8 | C15—C16—H16 | 120.4 |
| C4—C3—H3B | 108.8 | C11—C16—H16 | 120.4 |
| C2—C3—H3B | 108.8 | C13—O13—C17 | 116.57 (8) |
| H3A—C3—H3B | 107.7 | O13—C17—H17A | 109.5 |
| O42—C4—O41 | 123.38 (9) | O13—C17—H17B | 109.5 |
| O42—C4—C3 | 124.16 (9) | H17A—C17—H17B | 109.5 |
| O41—C4—C3 | 112.46 (9) | O13—C17—H17C | 109.5 |
| C4—O41—H41 | 109.2 (11) | H17A—C17—H17C | 109.5 |
| O1—C11—C12 | 124.18 (9) | H17B—C17—H17C | 109.5 |
| C11—O1—C1—C2 | −177.45 (8) | C11—C12—C13—C14 | −0.36 (15) |
| O1—C1—C2—C3 | −176.12 (8) | O13—C13—C14—C15 | 178.91 (9) |
| C1—C2—C3—C4 | −174.52 (9) | C12—C13—C14—C15 | −0.52 (15) |
| C2—C3—C4—O42 | −5.13 (16) | C13—C14—C15—C16 | 0.51 (16) |
| C2—C3—C4—O41 | 174.73 (9) | C14—C15—C16—C11 | 0.38 (16) |
| C1—O1—C11—C12 | −4.53 (15) | O1—C11—C16—C15 | 178.32 (9) |
| C1—O1—C11—C16 | 175.88 (9) | C12—C11—C16—C15 | −1.28 (15) |
| O1—C11—C12—C13 | −178.30 (9) | C14—C13—O13—C17 | 1.43 (15) |
| C16—C11—C12—C13 | 1.27 (15) | C12—C13—O13—C17 | −179.11 (9) |
| C11—C12—C13—O13 | −179.83 (9) |
| H··· | ||||
| O41—H41···O42i | 0.927 (18) | 1.804 (19) | 2.7292 (11) | 175.5 (16) |
| C17—H17B···O42ii | 0.98 | 2.48 | 3.2477 (14) | 135 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O41—H41⋯O42i | 0.927 (18) | 1.804 (19) | 2.7292 (11) | 175.5 (16) |
| C17—H17 | 0.98 | 2.48 | 3.2477 (14) | 135 |
Symmetry codes: (i) ; (ii) .