| Literature DB >> 21582476 |
Angel Mendoza1, David M Aparicio, Joel L Terán, Dino Gnecco, Jorge R Juárez.
Abstract
In the title compound, C(21)H(26)N(2)O(3), the morpholine ring has a chair conformation and the dihedral angle between the two phenyl rings is 59.0 (3)°. The crystal packing is stabilized by inter-molecular O-H⋯O hydrogen bonds, generating a ribbon structure along the a axis. An intra-molecular N-H⋯O contact is also present.Entities:
Year: 2009 PMID: 21582476 PMCID: PMC2968871 DOI: 10.1107/S1600536809008198
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H26N2O3 | |
| Melting point: 431 K | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 30 reflections |
| θ = 3.9–23.9° | |
| µ = 0.08 mm−1 | |
| Prism, colorless | |
| 0.72 × 0.28 × 0.16 mm | |
| Bruker P4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 29.0°, θmin = 1.6° |
| graphite | |
| 2θ/ω scans | |
| 3964 measured reflections | |
| 2959 independent reflections | 3 standard reflections every 97 reflections |
| 1116 reflections with | intensity decay: 3% |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2959 reflections | Δρmax = 0.24 e Å−3 |
| 251 parameters | Δρmin = −0.19 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.008 (2) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | −0.1563 (5) | 0.92034 (19) | 0.75127 (13) | 0.0567 (8) | |
| N2 | −0.1559 (5) | 0.90373 (19) | 0.60796 (14) | 0.0464 (8) | |
| O2 | 0.4127 (5) | 0.96834 (18) | 0.72379 (13) | 0.0598 (8) | |
| N1 | 0.2201 (6) | 0.9177 (2) | 0.81024 (16) | 0.0516 (9) | |
| C10 | 0.0914 (6) | 0.8018 (2) | 0.66365 (17) | 0.0447 (9) | |
| C7 | 0.2354 (6) | 0.9439 (2) | 0.74924 (19) | 0.0445 (9) | |
| O3 | −0.3564 (6) | 0.9556 (2) | 0.48787 (14) | 0.0770 (10) | |
| C5 | 0.0430 (7) | 0.8947 (2) | 0.64872 (18) | 0.0449 (9) | |
| C6 | 0.0197 (6) | 0.9474 (2) | 0.71116 (18) | 0.0434 (9) | |
| C4 | −0.2007 (7) | 0.9933 (2) | 0.5920 (2) | 0.0554 (11) | |
| H4A | −0.0697 | 1.0183 | 0.5721 | 0.066* | |
| H4B | −0.2322 | 1.0248 | 0.6312 | 0.066* | |
| C8 | 0.3993 (7) | 0.9216 (3) | 0.8565 (2) | 0.0552 (11) | |
| C15 | 0.3024 (8) | 0.7691 (2) | 0.65361 (19) | 0.0535 (10) | |
| H15 | 0.4145 | 0.8045 | 0.6380 | 0.064* | |
| C16 | 0.5180 (7) | 0.8364 (3) | 0.86521 (19) | 0.0558 (11) | |
| C11 | −0.0702 (7) | 0.7484 (3) | 0.6885 (2) | 0.0610 (11) | |
| H11 | −0.2125 | 0.7695 | 0.6964 | 0.073* | |
| C17 | 0.4526 (9) | 0.7626 (3) | 0.8349 (2) | 0.0703 (13) | |
| H17 | 0.3292 | 0.7635 | 0.8078 | 0.084* | |
| C3 | −0.3969 (8) | 1.0009 (3) | 0.5463 (2) | 0.0676 (13) | |
| H3A | −0.5294 | 0.9782 | 0.5669 | 0.081* | |
| H3B | −0.4235 | 1.0607 | 0.5367 | 0.081* | |
| C1 | −0.1284 (8) | 0.8570 (3) | 0.54712 (19) | 0.0637 (12) | |
| H1A | −0.1097 | 0.7967 | 0.5564 | 0.076* | |
| H1B | 0.0055 | 0.8768 | 0.5257 | 0.076* | |
| C2 | −0.3229 (9) | 0.8683 (3) | 0.5030 (2) | 0.0765 (15) | |
| H2A | −0.2973 | 0.8365 | 0.4635 | 0.092* | |
| H2B | −0.4559 | 0.8457 | 0.5233 | 0.092* | |
| C13 | 0.1855 (9) | 0.6310 (3) | 0.6898 (2) | 0.0699 (14) | |
| H13 | 0.2158 | 0.5736 | 0.6973 | 0.084* | |
| C14 | 0.3492 (8) | 0.6836 (3) | 0.6666 (2) | 0.0638 (12) | |
| H14 | 0.4918 | 0.6623 | 0.6594 | 0.077* | |
| C21 | 0.7048 (9) | 0.8339 (4) | 0.9047 (3) | 0.0896 (17) | |
| H21 | 0.7533 | 0.8835 | 0.9250 | 0.107* | |
| C9 | 0.3070 (9) | 0.9542 (4) | 0.9206 (2) | 0.0938 (18) | |
| H9A | 0.2331 | 1.0078 | 0.9138 | 0.141* | |
| H9B | 0.4271 | 0.9618 | 0.9506 | 0.141* | |
| H9C | 0.2027 | 0.9135 | 0.9375 | 0.141* | |
| C12 | −0.0219 (9) | 0.6627 (3) | 0.7018 (3) | 0.0742 (14) | |
| H12 | −0.1316 | 0.6274 | 0.7189 | 0.089* | |
| C18 | 0.5674 (12) | 0.6867 (3) | 0.8440 (3) | 0.0958 (18) | |
| H18 | 0.5207 | 0.6370 | 0.8236 | 0.115* | |
| C19 | 0.7512 (13) | 0.6857 (5) | 0.8837 (4) | 0.119 (2) | |
| H19 | 0.8297 | 0.6351 | 0.8899 | 0.143* | |
| C20 | 0.8184 (12) | 0.7586 (5) | 0.9141 (3) | 0.122 (2) | |
| H20 | 0.9418 | 0.7574 | 0.9412 | 0.147* | |
| H1O | −0.307 (14) | 0.929 (5) | 0.735 (4) | 0.184* | |
| H1N | 0.059 (12) | 0.906 (4) | 0.819 (3) | 0.147* | |
| H5 | 0.180 (12) | 0.915 (4) | 0.627 (3) | 0.147* | |
| H6 | −0.004 (11) | 1.009 (4) | 0.697 (3) | 0.147* | |
| H8 | 0.535 (12) | 0.960 (4) | 0.839 (3) | 0.147* |
| O1 | 0.0370 (14) | 0.0800 (19) | 0.0531 (15) | 0.0034 (16) | 0.0045 (14) | 0.0008 (15) |
| N2 | 0.0476 (19) | 0.0465 (17) | 0.0450 (16) | 0.0034 (17) | −0.0023 (16) | 0.0024 (14) |
| O2 | 0.0429 (17) | 0.0697 (18) | 0.0668 (18) | −0.0070 (15) | 0.0011 (15) | 0.0061 (15) |
| N1 | 0.0388 (18) | 0.065 (2) | 0.0507 (19) | 0.0006 (18) | −0.0067 (17) | −0.0002 (17) |
| C10 | 0.041 (2) | 0.045 (2) | 0.049 (2) | 0.003 (2) | 0.0017 (19) | 0.0029 (17) |
| C7 | 0.038 (2) | 0.044 (2) | 0.051 (2) | 0.0032 (18) | −0.001 (2) | −0.0001 (19) |
| O3 | 0.091 (3) | 0.086 (2) | 0.0543 (17) | 0.013 (2) | −0.0085 (19) | 0.0103 (16) |
| C5 | 0.041 (2) | 0.046 (2) | 0.048 (2) | 0.0057 (19) | 0.0005 (19) | 0.0005 (17) |
| C6 | 0.034 (2) | 0.047 (2) | 0.049 (2) | 0.0020 (19) | 0.0026 (18) | 0.0012 (18) |
| C4 | 0.058 (3) | 0.050 (2) | 0.058 (2) | 0.007 (2) | −0.009 (2) | 0.008 (2) |
| C8 | 0.047 (2) | 0.064 (3) | 0.055 (2) | 0.008 (2) | −0.011 (2) | −0.009 (2) |
| C15 | 0.050 (2) | 0.052 (2) | 0.058 (2) | 0.002 (2) | 0.005 (2) | −0.001 (2) |
| C16 | 0.048 (3) | 0.067 (3) | 0.053 (2) | 0.005 (2) | 0.002 (2) | 0.003 (2) |
| C11 | 0.048 (3) | 0.050 (2) | 0.085 (3) | 0.002 (2) | 0.008 (3) | 0.009 (2) |
| C17 | 0.069 (3) | 0.068 (3) | 0.074 (3) | 0.007 (3) | 0.004 (3) | 0.008 (3) |
| C3 | 0.073 (3) | 0.072 (3) | 0.058 (2) | 0.016 (3) | −0.003 (3) | 0.005 (2) |
| C1 | 0.080 (3) | 0.061 (2) | 0.051 (2) | 0.007 (3) | −0.003 (3) | −0.010 (2) |
| C2 | 0.083 (4) | 0.088 (3) | 0.058 (3) | 0.004 (3) | −0.016 (3) | −0.010 (3) |
| C13 | 0.072 (3) | 0.047 (2) | 0.090 (3) | 0.006 (3) | −0.002 (3) | 0.008 (2) |
| C14 | 0.057 (3) | 0.051 (2) | 0.084 (3) | 0.016 (2) | 0.004 (3) | −0.004 (2) |
| C21 | 0.075 (4) | 0.098 (4) | 0.096 (4) | 0.018 (4) | −0.030 (3) | 0.003 (3) |
| C9 | 0.080 (3) | 0.134 (5) | 0.068 (3) | 0.034 (4) | −0.018 (3) | −0.042 (3) |
| C12 | 0.063 (3) | 0.052 (3) | 0.107 (4) | −0.003 (2) | 0.003 (3) | 0.018 (3) |
| C18 | 0.108 (5) | 0.063 (3) | 0.116 (4) | 0.014 (4) | 0.016 (4) | 0.011 (3) |
| C19 | 0.114 (6) | 0.094 (5) | 0.149 (6) | 0.045 (5) | −0.001 (5) | 0.025 (5) |
| C20 | 0.104 (5) | 0.125 (5) | 0.137 (6) | 0.035 (5) | −0.042 (5) | 0.025 (5) |
| O1—C6 | 1.410 (5) | C16—C21 | 1.389 (6) |
| O1—H1O | 0.98 (8) | C11—C12 | 1.401 (6) |
| N2—C4 | 1.466 (5) | C11—H11 | 0.9300 |
| N2—C1 | 1.468 (5) | C17—C18 | 1.387 (7) |
| N2—C5 | 1.470 (5) | C17—H17 | 0.9300 |
| O2—C7 | 1.248 (4) | C3—H3A | 0.9700 |
| N1—C7 | 1.333 (5) | C3—H3B | 0.9700 |
| N1—C8 | 1.443 (5) | C1—C2 | 1.494 (7) |
| N1—H1N | 1.00 (7) | C1—H1A | 0.9700 |
| C10—C11 | 1.380 (5) | C1—H1B | 0.9700 |
| C10—C15 | 1.382 (6) | C2—H2A | 0.9700 |
| C10—C5 | 1.514 (5) | C2—H2B | 0.9700 |
| C7—C6 | 1.517 (5) | C13—C12 | 1.363 (7) |
| O3—C2 | 1.416 (5) | C13—C14 | 1.370 (6) |
| O3—C3 | 1.426 (5) | C13—H13 | 0.9300 |
| C5—C6 | 1.542 (5) | C14—H14 | 0.9300 |
| C5—H5 | 0.99 (7) | C21—C20 | 1.376 (8) |
| C6—H6 | 1.02 (6) | C21—H21 | 0.9300 |
| C4—C3 | 1.516 (6) | C9—H9A | 0.9600 |
| C4—H4A | 0.9700 | C9—H9B | 0.9600 |
| C4—H4B | 0.9700 | C9—H9C | 0.9600 |
| C8—C16 | 1.523 (6) | C12—H12 | 0.9300 |
| C8—C9 | 1.528 (6) | C18—C19 | 1.376 (9) |
| C8—H8 | 1.08 (7) | C18—H18 | 0.9300 |
| C15—C14 | 1.393 (5) | C19—C20 | 1.365 (9) |
| C15—H15 | 0.9300 | C19—H19 | 0.9300 |
| C16—C17 | 1.373 (6) | C20—H20 | 0.9300 |
| C6—O1—H1O | 116 (4) | C16—C17—H17 | 119.5 |
| C4—N2—C1 | 107.6 (3) | C18—C17—H17 | 119.5 |
| C4—N2—C5 | 111.8 (3) | O3—C3—C4 | 111.1 (4) |
| C1—N2—C5 | 110.8 (3) | O3—C3—H3A | 109.4 |
| C7—N1—C8 | 124.5 (4) | C4—C3—H3A | 109.4 |
| C7—N1—H1N | 107 (4) | O3—C3—H3B | 109.4 |
| C8—N1—H1N | 127 (4) | C4—C3—H3B | 109.4 |
| C11—C10—C15 | 118.4 (4) | H3A—C3—H3B | 108.0 |
| C11—C10—C5 | 121.5 (4) | N2—C1—C2 | 112.3 (4) |
| C15—C10—C5 | 120.1 (4) | N2—C1—H1A | 109.1 |
| O2—C7—N1 | 123.7 (4) | C2—C1—H1A | 109.1 |
| O2—C7—C6 | 119.7 (3) | N2—C1—H1B | 109.1 |
| N1—C7—C6 | 116.5 (3) | C2—C1—H1B | 109.1 |
| C2—O3—C3 | 108.5 (3) | H1A—C1—H1B | 107.9 |
| N2—C5—C10 | 111.5 (3) | O3—C2—C1 | 111.2 (4) |
| N2—C5—C6 | 111.0 (3) | O3—C2—H2A | 109.4 |
| C10—C5—C6 | 111.1 (3) | C1—C2—H2A | 109.4 |
| N2—C5—H5 | 112 (4) | O3—C2—H2B | 109.4 |
| C10—C5—H5 | 104 (4) | C1—C2—H2B | 109.4 |
| C6—C5—H5 | 107 (4) | H2A—C2—H2B | 108.0 |
| O1—C6—C7 | 108.7 (3) | C12—C13—C14 | 120.0 (4) |
| O1—C6—C5 | 113.8 (3) | C12—C13—H13 | 120.0 |
| C7—C6—C5 | 109.9 (3) | C14—C13—H13 | 120.0 |
| O1—C6—H6 | 110 (4) | C13—C14—C15 | 120.1 (4) |
| C7—C6—H6 | 108 (4) | C13—C14—H14 | 120.0 |
| C5—C6—H6 | 106 (4) | C15—C14—H14 | 120.0 |
| N2—C4—C3 | 111.0 (3) | C20—C21—C16 | 120.5 (6) |
| N2—C4—H4A | 109.4 | C20—C21—H21 | 119.8 |
| C3—C4—H4A | 109.4 | C16—C21—H21 | 119.8 |
| N2—C4—H4B | 109.4 | C8—C9—H9A | 109.5 |
| C3—C4—H4B | 109.4 | C8—C9—H9B | 109.5 |
| H4A—C4—H4B | 108.0 | H9A—C9—H9B | 109.5 |
| N1—C8—C16 | 113.0 (3) | C8—C9—H9C | 109.5 |
| N1—C8—C9 | 108.8 (3) | H9A—C9—H9C | 109.5 |
| C16—C8—C9 | 111.1 (4) | H9B—C9—H9C | 109.5 |
| N1—C8—H8 | 112 (3) | C13—C12—C11 | 120.1 (5) |
| C16—C8—H8 | 100 (3) | C13—C12—H12 | 119.9 |
| C9—C8—H8 | 112 (3) | C11—C12—H12 | 119.9 |
| C10—C15—C14 | 120.8 (4) | C19—C18—C17 | 119.4 (6) |
| C10—C15—H15 | 119.6 | C19—C18—H18 | 120.3 |
| C14—C15—H15 | 119.6 | C17—C18—H18 | 120.3 |
| C17—C16—C21 | 118.5 (5) | C20—C19—C18 | 120.2 (6) |
| C17—C16—C8 | 123.3 (4) | C20—C19—H19 | 119.9 |
| C21—C16—C8 | 118.1 (4) | C18—C19—H19 | 119.9 |
| C10—C11—C12 | 120.6 (4) | C19—C20—C21 | 120.4 (6) |
| C10—C11—H11 | 119.7 | C19—C20—H20 | 119.8 |
| C12—C11—H11 | 119.7 | C21—C20—H20 | 119.8 |
| C16—C17—C18 | 121.1 (5) | ||
| C8—N1—C7—O2 | 6.1 (6) | N1—C8—C16—C17 | −3.5 (6) |
| C8—N1—C7—C6 | −170.8 (3) | C9—C8—C16—C17 | 119.1 (5) |
| C4—N2—C5—C10 | −178.6 (3) | N1—C8—C16—C21 | 175.0 (4) |
| C1—N2—C5—C10 | −58.5 (4) | C9—C8—C16—C21 | −62.5 (5) |
| C4—N2—C5—C6 | 57.0 (4) | C15—C10—C11—C12 | −1.3 (6) |
| C1—N2—C5—C6 | 177.1 (3) | C5—C10—C11—C12 | 179.9 (4) |
| C11—C10—C5—N2 | −51.9 (5) | C21—C16—C17—C18 | 1.0 (7) |
| C15—C10—C5—N2 | 129.3 (4) | C8—C16—C17—C18 | 179.5 (4) |
| C11—C10—C5—C6 | 72.4 (5) | C2—O3—C3—C4 | 60.3 (5) |
| C15—C10—C5—C6 | −106.4 (4) | N2—C4—C3—O3 | −59.3 (5) |
| O2—C7—C6—O1 | −177.3 (3) | C4—N2—C1—C2 | −54.6 (5) |
| N1—C7—C6—O1 | −0.2 (4) | C5—N2—C1—C2 | −177.1 (4) |
| O2—C7—C6—C5 | 57.6 (5) | C3—O3—C2—C1 | −59.9 (5) |
| N1—C7—C6—C5 | −125.4 (3) | N2—C1—C2—O3 | 59.0 (5) |
| N2—C5—C6—O1 | 63.3 (4) | C12—C13—C14—C15 | −1.7 (7) |
| C10—C5—C6—O1 | −61.3 (4) | C10—C15—C14—C13 | −0.3 (7) |
| N2—C5—C6—C7 | −174.5 (3) | C17—C16—C21—C20 | −1.3 (8) |
| C10—C5—C6—C7 | 60.9 (4) | C8—C16—C21—C20 | −179.8 (6) |
| C1—N2—C4—C3 | 54.3 (5) | C14—C13—C12—C11 | 2.1 (8) |
| C5—N2—C4—C3 | 176.2 (3) | C10—C11—C12—C13 | −0.6 (7) |
| C7—N1—C8—C16 | −99.7 (5) | C16—C17—C18—C19 | −0.6 (8) |
| C7—N1—C8—C9 | 136.4 (4) | C17—C18—C19—C20 | 0.4 (10) |
| C11—C10—C15—C14 | 1.7 (6) | C18—C19—C20—C21 | −0.7 (11) |
| C5—C10—C15—C14 | −179.4 (4) | C16—C21—C20—C19 | 1.1 (10) |
| H··· | ||||
| N1—H1N···O1 | 1.00 (7) | 1.92 (7) | 2.569 (5) | 120 (5) |
| O1—H1O···O2i | 0.98 (8) | 1.80 (8) | 2.753 (4) | 163 (7) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 1.00 (7) | 1.92 (7) | 2.569 (5) | 120 (5) |
| O1—H1 | 0.98 (8) | 1.80 (8) | 2.753 (4) | 163 (7) |
Symmetry code: (i) .