Literature DB >> 21582460

N-[6-(Dibromo-meth-yl)-2-pyrid-yl]-2,2-dimethyl-propionamide.

Hoong-Kun Fun, Suchada Chantrapromma, Annada C Maity, Rinku Chakrabarty, Shyamaprosad Goswami.   

Abstract

In the mol-ecular structure of the title compound, C(11)H(14)Br(2)N(2)O, the dimethyl-propionamide substituent is twisted slightly with respect to the pyridine ring, the inter-planar angle being 12.3 (2)°. The dibromo-methyl group is orientated in such a way that the two Br atoms are tilted away from the pyridine ring. In the crystal structure, mol-ecules are associated into supra-molecular chains by weak C-H⋯O inter-actions. The crystal is further stabilized by weak N-H⋯Br and C-H⋯N inter-actions.

Entities:  

Year:  2009        PMID: 21582460      PMCID: PMC2969024          DOI: 10.1107/S1600536809007909

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For mol­ecular recognition and N-bromo­succinimides, see, for example: Goswami & Mukherjee, (1997 ▶); Goswami et al. (2000 ▶, 2001 ▶, 2004 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C11H14Br2N2O M = 350.06 Monoclinic, a = 13.2936 (7) Å b = 8.4660 (3) Å c = 11.9638 (6) Å β = 99.195 (3)° V = 1329.15 (11) Å3 Z = 4 Mo Kα radiation μ = 6.08 mm−1 T = 100 K 0.33 × 0.29 × 0.24 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.114, T max = 0.233 12087 measured reflections 3863 independent reflections 2954 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.153 S = 1.10 3863 reflections 152 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.98 e Å−3 Δρmin = −1.13 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809007909/tk2385sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809007909/tk2385Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H14Br2N2OF(000) = 688
Mr = 350.06Dx = 1.749 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3863 reflections
a = 13.2936 (7) Åθ = 1.6–30.0°
b = 8.4660 (3) ŵ = 6.08 mm1
c = 11.9638 (6) ÅT = 100 K
β = 99.195 (3)°Block, colorless
V = 1329.15 (11) Å30.33 × 0.29 × 0.24 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer3863 independent reflections
Radiation source: sealed tube2954 reflections with I > 2σ(I)
graphiteRint = 0.039
φ and ω scansθmax = 30.0°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −16→18
Tmin = 0.114, Tmax = 0.233k = −9→11
12087 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.153H atoms treated by a mixture of independent and constrained refinement
S = 1.10w = 1/[σ2(Fo2) + (0.0946P)2] where P = (Fo2 + 2Fc2)/3
3863 reflections(Δ/σ)max < 0.001
152 parametersΔρmax = 1.98 e Å3
0 restraintsΔρmin = −1.13 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br1−0.01634 (3)0.15918 (5)0.82585 (4)0.02738 (15)
Br20.08741 (3)0.31287 (5)1.05799 (4)0.02696 (15)
O10.4376 (2)0.5484 (4)0.6250 (3)0.0403 (9)
N10.1855 (2)0.4274 (4)0.7746 (3)0.0188 (6)
N20.2728 (3)0.5490 (4)0.6511 (3)0.0233 (7)
C10.1747 (3)0.3175 (4)0.8522 (4)0.0205 (8)
C20.2499 (3)0.2067 (5)0.8910 (4)0.0250 (9)
H2A0.24160.13450.94740.030*
C30.3376 (3)0.2089 (5)0.8420 (4)0.0269 (9)
H3A0.38870.13510.86430.032*
C40.3500 (3)0.3196 (4)0.7602 (4)0.0230 (8)
H4A0.40840.32160.72670.028*
C50.2719 (3)0.4275 (5)0.7302 (3)0.0191 (7)
C60.3540 (3)0.6069 (5)0.6056 (4)0.0237 (8)
C70.3295 (3)0.7544 (5)0.5291 (4)0.0278 (9)
C80.3325 (5)0.8986 (6)0.6075 (5)0.0463 (13)
H8A0.39620.90010.65840.070*
H8B0.27740.89230.65020.070*
H8C0.32600.99330.56290.070*
C90.2253 (4)0.7427 (6)0.4534 (5)0.0441 (14)
H9A0.22270.64840.40840.066*
H9B0.21520.83320.40450.066*
H9C0.17270.73910.49980.066*
C100.4117 (4)0.7706 (7)0.4552 (5)0.0452 (14)
H10A0.41500.67530.41240.068*
H10B0.47630.78870.50220.068*
H10C0.39590.85790.40430.068*
C110.0748 (3)0.3265 (4)0.8950 (3)0.0212 (8)
H11A0.04330.42830.87130.025*
H1N20.224 (3)0.609 (6)0.638 (4)0.023 (12)*
U11U22U33U12U13U23
Br10.0269 (2)0.0317 (3)0.0252 (2)−0.00904 (17)0.00912 (17)−0.00740 (16)
Br20.0314 (3)0.0321 (3)0.0176 (2)0.00285 (17)0.00477 (17)0.00017 (15)
O10.0224 (16)0.0365 (19)0.064 (3)0.0035 (14)0.0128 (16)0.0234 (17)
N10.0202 (16)0.0166 (15)0.0189 (15)−0.0010 (12)0.0012 (13)−0.0006 (12)
N20.0215 (17)0.0221 (17)0.0271 (18)0.0045 (14)0.0064 (14)0.0044 (14)
C10.0213 (19)0.0155 (18)0.025 (2)−0.0025 (14)0.0030 (16)−0.0011 (14)
C20.027 (2)0.0176 (18)0.031 (2)0.0014 (15)0.0064 (17)0.0041 (16)
C30.026 (2)0.0172 (19)0.037 (2)0.0033 (16)0.0029 (18)0.0031 (17)
C40.0197 (19)0.0169 (19)0.033 (2)0.0014 (14)0.0070 (17)0.0001 (15)
C50.0186 (18)0.0168 (18)0.0219 (18)−0.0021 (14)0.0031 (15)−0.0005 (14)
C60.0211 (19)0.0207 (19)0.030 (2)−0.0017 (15)0.0057 (16)0.0011 (16)
C70.027 (2)0.024 (2)0.034 (2)0.0004 (17)0.0103 (18)0.0048 (17)
C80.065 (4)0.022 (2)0.053 (3)0.003 (2)0.010 (3)0.000 (2)
C90.043 (3)0.035 (3)0.051 (3)−0.003 (2)−0.004 (2)0.025 (2)
C100.046 (3)0.043 (3)0.052 (3)0.012 (2)0.023 (3)0.022 (3)
C110.024 (2)0.0194 (19)0.0206 (19)−0.0010 (15)0.0044 (15)−0.0021 (14)
Br1—C111.959 (4)C4—H4A0.9300
Br2—C111.934 (4)C6—C71.551 (6)
O1—C61.205 (5)C7—C101.518 (6)
N1—C11.338 (5)C7—C91.532 (7)
N1—C51.341 (5)C7—C81.536 (7)
N2—C61.374 (5)C8—H8A0.9600
N2—C51.400 (5)C8—H8B0.9600
N2—H1N20.82 (5)C8—H8C0.9600
C1—C21.395 (6)C9—H9A0.9600
C1—C111.500 (6)C9—H9B0.9600
C2—C31.386 (6)C9—H9C0.9600
C2—H2A0.9300C10—H10A0.9600
C3—C41.384 (6)C10—H10B0.9600
C3—H3A0.9300C10—H10C0.9600
C4—C51.385 (5)C11—H11A0.9800
C1—N1—C5117.9 (3)C9—C7—C6112.4 (4)
C6—N2—C5128.5 (4)C8—C7—C6107.2 (4)
C6—N2—H1N2110 (3)C7—C8—H8A109.5
C5—N2—H1N2120 (3)C7—C8—H8B109.5
N1—C1—C2123.2 (4)H8A—C8—H8B109.5
N1—C1—C11113.6 (3)C7—C8—H8C109.5
C2—C1—C11123.2 (4)H8A—C8—H8C109.5
C3—C2—C1117.2 (4)H8B—C8—H8C109.5
C3—C2—H2A121.4C7—C9—H9A109.5
C1—C2—H2A121.4C7—C9—H9B109.5
C4—C3—C2120.7 (4)H9A—C9—H9B109.5
C4—C3—H3A119.6C7—C9—H9C109.5
C2—C3—H3A119.6H9A—C9—H9C109.5
C3—C4—C5117.5 (4)H9B—C9—H9C109.5
C3—C4—H4A121.3C7—C10—H10A109.5
C5—C4—H4A121.3C7—C10—H10B109.5
N1—C5—C4123.4 (4)H10A—C10—H10B109.5
N1—C5—N2111.6 (3)C7—C10—H10C109.5
C4—C5—N2124.9 (4)H10A—C10—H10C109.5
O1—C6—N2122.4 (4)H10B—C10—H10C109.5
O1—C6—C7123.0 (4)C1—C11—Br2113.7 (3)
N2—C6—C7114.6 (3)C1—C11—Br1110.0 (3)
C10—C7—C9109.2 (4)Br2—C11—Br1109.32 (19)
C10—C7—C8109.4 (4)C1—C11—H11A107.9
C9—C7—C8110.2 (4)Br2—C11—H11A107.9
C10—C7—C6108.2 (4)Br1—C11—H11A107.9
C5—N1—C1—C21.9 (6)C5—N2—C6—O15.2 (7)
C5—N1—C1—C11−179.1 (3)C5—N2—C6—C7−174.0 (4)
N1—C1—C2—C3−2.8 (6)O1—C6—C7—C1019.8 (6)
C11—C1—C2—C3178.3 (4)N2—C6—C7—C10−161.0 (4)
C1—C2—C3—C41.6 (7)O1—C6—C7—C9140.5 (5)
C2—C3—C4—C50.3 (7)N2—C6—C7—C9−40.3 (6)
C1—N1—C5—C40.3 (6)O1—C6—C7—C8−98.2 (5)
C1—N1—C5—N2−179.7 (3)N2—C6—C7—C881.0 (5)
C3—C4—C5—N1−1.3 (6)N1—C1—C11—Br2−133.6 (3)
C3—C4—C5—N2178.6 (4)C2—C1—C11—Br245.5 (5)
C6—N2—C5—N1165.5 (4)N1—C1—C11—Br1103.5 (3)
C6—N2—C5—C4−14.4 (7)C2—C1—C11—Br1−77.5 (5)
D—H···AD—HH···AD···AD—H···A
N2—H1N2···Br1i0.82 (5)2.89 (4)3.587 (4)144 (4)
C3—H3A···O1ii0.932.413.249 (5)151
C4—H4A···O10.932.342.886 (5)117
C9—H9B···N1iii0.962.553.506 (6)179
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H1N2⋯Br1i0.82 (5)2.89 (4)3.587 (4)144 (4)
C3—H3A⋯O1ii0.932.413.249 (5)151
C4—H4A⋯O10.932.342.886 (5)117
C9—H9B⋯N1iii0.962.553.506 (6)179

Symmetry codes: (i) ; (ii) ; (iii) .

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