Literature DB >> 21582431

(9S,13R,14R)-7,8-Didehydro-3,4,7-trimeth-oxy-17-methyl-morphinan-6-one.

Yu-Feng Li1, Yi Qian, Li-He Yin, Ran Lv, Hong-Jun Zhu.   

Abstract

The title compound, C(20)H(25)NO(4), was synthesized by a Mitsunobu reaction of sinomenine [(9S,13R,14R)-7,8-didehydro-4-hydroxy-3,7-dimethoxy-17-methylmorphinan-6-one] with methanol. The chiral centers were unchanged during the reaction. Intra-molecular C-H⋯O hydrogen bonds result in the formation of six-membered rings.

Entities:  

Year:  2009        PMID: 21582431      PMCID: PMC2969083          DOI: 10.1107/S1600536808040749

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the anti-inflammatory, anti­tussive and anti­arrgythmic activities of sinomenine, see: Wang & Li (1965 ▶).

Experimental

Crystal data

C20H25NO4 M = 343.41 Trigonal, a = 10.9590 (15) Å c = 12.726 (3) Å V = 1323.6 (4) Å3 Z = 3 Mo Kα radiation μ = 0.09 mm−1 T = 298 K 0.40 × 0.30 × 0.30 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.965, T max = 0.974 2008 measured reflections 1728 independent reflections 1281 reflections with I > 2σ(I) R int = 0.037 3 standard reflections every 200 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.070 wR(F 2) = 0.208 S = 1.06 1728 reflections 226 parameters 44 restraints H-atom parameters constrained Δρmax = 0.45 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808040749/hk2561sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808040749/hk2561Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H25NO4Dx = 1.292 Mg m3
Mr = 343.41Mo Kα radiation, λ = 0.71073 Å
Trigonal, P32Cell parameters from 25 reflections
Hall symbol: P 32θ = 10–13°
a = 10.9590 (15) ŵ = 0.09 mm1
c = 12.726 (3) ÅT = 298 K
V = 1323.6 (4) Å3Block, colorless
Z = 30.40 × 0.30 × 0.30 mm
F(000) = 552
Enraf–Nonius CAD-4 diffractometer1281 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.037
graphiteθmax = 26.0°, θmin = 2.2°
ω/2θ scansh = −13→6
Absorption correction: ψ scan (North et al., 1968)k = 0→11
Tmin = 0.965, Tmax = 0.974l = −15→15
2008 measured reflections3 standard reflections every 200 reflections
1728 independent reflections intensity decay: none
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.070Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.208H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.1178P)2 + 0.4849P] where P = (Fo2 + 2Fc2)/3
1728 reflections(Δ/σ)max = 0.005
226 parametersΔρmax = 0.45 e Å3
44 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.7890 (7)0.2303 (6)0.0383 (5)0.0855 (17)
O20.8937 (7)0.0744 (5)0.1262 (6)0.093 (2)
O31.2532 (6)0.7232 (5)−0.1456 (4)0.0719 (13)
O41.0260 (6)0.4750 (6)−0.1870 (4)0.0765 (15)
N0.9014 (7)0.6779 (6)0.2458 (4)0.0607 (14)
C180.7882 (16)0.1603 (14)−0.0423 (8)0.123 (4)
H18A0.69760.1188−0.07570.185*
H18B0.80710.0873−0.02100.185*
H18C0.85950.2222−0.09090.185*
C170.9251 (11)−0.0152 (9)0.1821 (8)0.093 (3)
H17A0.8722−0.10880.15400.139*
H17B0.9009−0.01590.25470.139*
H17C1.02400.01720.17630.139*
C30.9567 (7)0.2137 (7)0.1507 (5)0.0592 (16)
C40.9072 (7)0.2945 (7)0.0963 (5)0.0563 (15)
C120.9634 (6)0.4366 (6)0.1177 (4)0.0436 (12)
C111.0594 (6)0.4957 (7)0.1981 (4)0.0470 (13)
C11.1056 (8)0.4155 (8)0.2521 (5)0.0590 (17)
H1A1.17230.45790.30510.071*
C21.0563 (8)0.2771 (8)0.2294 (6)0.0653 (19)
H2A1.08900.22590.26630.078*
C191.3723 (8)0.8546 (9)−0.1173 (7)0.082 (2)
H19A1.44850.8759−0.16460.123*
H19B1.40050.8490−0.04680.123*
H19C1.34800.9274−0.12120.123*
C200.9242 (11)0.7233 (10)0.3554 (6)0.085 (2)
H20A0.99760.82010.35940.127*
H20B0.95110.66590.39490.127*
H20C0.83880.71380.38400.127*
C150.7923 (7)0.5297 (7)0.2337 (5)0.0569 (16)
H15A0.70560.51520.26550.068*
H15B0.82130.47110.27090.068*
C160.7647 (6)0.4843 (7)0.1193 (5)0.0531 (15)
H16A0.72210.53230.08420.064*
H16B0.69940.38370.11540.064*
C130.9034 (6)0.5194 (6)0.0638 (5)0.0461 (13)
C50.8825 (7)0.4990 (7)−0.0559 (5)0.0533 (14)
H5A0.81550.4009−0.07060.064*
H5B0.84290.5550−0.08190.064*
C61.0162 (7)0.5401 (7)−0.1131 (5)0.0557 (15)
C71.1414 (7)0.6762 (7)−0.0771 (5)0.0541 (14)
C81.1330 (7)0.7371 (6)0.0109 (5)0.0532 (15)
H8A1.21190.82000.03280.064*
C141.0026 (7)0.6780 (6)0.0759 (4)0.0470 (13)
H14A0.95020.72360.05190.056*
C91.0334 (7)0.7134 (7)0.1920 (5)0.0549 (15)
H9A1.09380.81590.19660.066*
C101.1204 (8)0.6499 (7)0.2307 (5)0.0593 (16)
H10A1.12620.65620.30670.071*
H10B1.21530.70460.20310.071*
U11U22U33U12U13U23
O10.090 (4)0.069 (3)0.099 (4)0.040 (3)−0.017 (3)−0.012 (3)
O20.101 (4)0.042 (3)0.140 (5)0.039 (3)−0.018 (4)0.016 (3)
O30.071 (3)0.068 (3)0.071 (3)0.030 (3)0.023 (2)0.011 (2)
O40.077 (3)0.081 (3)0.075 (3)0.042 (3)−0.001 (3)−0.024 (3)
N0.077 (4)0.066 (3)0.053 (3)0.046 (3)0.007 (3)0.001 (2)
C180.207 (13)0.138 (9)0.090 (7)0.135 (10)−0.005 (7)−0.001 (7)
C170.112 (7)0.062 (5)0.126 (7)0.060 (5)0.041 (6)0.043 (5)
C30.059 (4)0.051 (3)0.072 (4)0.031 (3)0.010 (3)0.020 (3)
C40.058 (4)0.041 (3)0.069 (4)0.024 (3)0.001 (3)0.014 (3)
C120.048 (3)0.046 (3)0.045 (3)0.030 (3)0.002 (2)0.010 (2)
C110.056 (3)0.055 (3)0.042 (3)0.037 (3)−0.001 (3)0.002 (2)
C10.067 (4)0.085 (5)0.049 (3)0.056 (4)−0.002 (3)0.009 (3)
C20.069 (4)0.073 (5)0.077 (4)0.053 (4)0.006 (4)0.021 (4)
C190.062 (5)0.086 (6)0.078 (5)0.023 (4)0.012 (4)−0.008 (4)
C200.124 (7)0.101 (6)0.054 (4)0.074 (6)0.010 (4)0.001 (4)
C150.061 (4)0.062 (4)0.064 (4)0.042 (3)0.010 (3)0.009 (3)
C160.045 (3)0.053 (3)0.066 (4)0.028 (3)0.002 (3)0.013 (3)
C130.047 (3)0.043 (3)0.054 (3)0.027 (3)−0.004 (3)0.006 (2)
C50.062 (3)0.046 (3)0.060 (3)0.034 (3)−0.010 (3)−0.002 (3)
C60.064 (4)0.050 (3)0.059 (3)0.032 (3)−0.002 (3)0.000 (3)
C70.060 (3)0.054 (3)0.046 (3)0.027 (3)0.004 (3)0.003 (3)
C80.058 (3)0.045 (3)0.054 (3)0.024 (3)0.003 (3)0.003 (2)
C140.060 (4)0.042 (3)0.045 (3)0.030 (3)0.004 (3)0.007 (2)
C90.065 (4)0.052 (3)0.052 (4)0.033 (3)−0.008 (3)−0.003 (3)
C100.069 (4)0.069 (4)0.048 (3)0.041 (4)−0.019 (3)−0.008 (3)
O1—C181.278 (11)C19—H19B0.9600
O1—C41.344 (9)C19—H19C0.9600
O2—C31.360 (8)C20—H20A0.9600
O2—C171.388 (9)C20—H20B0.9600
O3—C71.377 (8)C20—H20C0.9600
O3—C191.424 (9)C15—C161.520 (7)
O4—C61.217 (8)C15—H15A0.9700
N—C201.461 (10)C15—H15B0.9700
N—C91.466 (9)C16—C131.541 (8)
N—C151.466 (9)C16—H16A0.9700
C18—H18A0.9600C16—H16B0.9700
C18—H18B0.9600C13—C141.528 (8)
C18—H18C0.9600C13—C51.540 (9)
C17—H17A0.9600C5—C61.490 (10)
C17—H17B0.9600C5—H5A0.9700
C17—H17C0.9600C5—H5B0.9700
C3—C21.386 (10)C6—C71.507 (9)
C3—C41.428 (8)C7—C81.330 (9)
C4—C121.385 (9)C8—C141.491 (9)
C12—C111.376 (8)C8—H8A0.9300
C12—C131.524 (7)C14—C91.523 (8)
C11—C11.395 (8)C14—H14A0.9800
C11—C101.531 (9)C9—C101.516 (9)
C1—C21.363 (10)C9—H9A0.9800
C1—H1A0.9300C10—H10A0.9700
C2—H2A0.9300C10—H10B0.9700
C19—H19A0.9600
C18—O1—C4118.1 (9)C16—C15—H15A109.1
C3—O2—C17120.6 (7)N—C15—H15B109.1
C7—O3—C19114.3 (6)C16—C15—H15B109.1
C20—N—C9112.2 (6)H15A—C15—H15B107.9
C20—N—C15112.5 (6)C15—C16—C13110.4 (5)
C9—N—C15113.3 (5)C15—C16—H16A109.6
O1—C18—H18A109.5C13—C16—H16A109.6
O1—C18—H18B109.5C15—C16—H16B109.6
H18A—C18—H18B109.5C13—C16—H16B109.6
O1—C18—H18C109.5H16A—C16—H16B108.1
H18A—C18—H18C109.5C12—C13—C14111.0 (5)
H18B—C18—H18C109.5C12—C13—C5115.9 (5)
O2—C17—H17A109.5C14—C13—C5103.5 (4)
O2—C17—H17B109.5C12—C13—C16108.0 (5)
H17A—C17—H17B109.5C14—C13—C16106.8 (5)
O2—C17—H17C109.5C5—C13—C16111.2 (5)
H17A—C17—H17C109.5C6—C5—C13112.7 (5)
H17B—C17—H17C109.5C6—C5—H5A109.0
O2—C3—C2124.0 (6)C13—C5—H5A109.0
O2—C3—C4116.6 (6)C6—C5—H5B109.0
C2—C3—C4119.2 (6)C13—C5—H5B109.0
O1—C4—C12117.9 (5)H5A—C5—H5B107.8
O1—C4—C3120.5 (6)O4—C6—C5124.2 (6)
C12—C4—C3120.6 (6)O4—C6—C7120.8 (6)
C11—C12—C4118.8 (5)C5—C6—C7115.0 (5)
C11—C12—C13120.7 (5)C8—C7—O3128.1 (6)
C4—C12—C13119.9 (5)C8—C7—C6119.7 (6)
C12—C11—C1120.2 (6)O3—C7—C6112.2 (5)
C12—C11—C10122.0 (5)C7—C8—C14122.8 (6)
C1—C11—C10117.8 (5)C7—C8—H8A118.6
C2—C1—C11122.1 (6)C14—C8—H8A118.6
C2—C1—H1A119.0C8—C14—C9112.7 (5)
C11—C1—H1A119.0C8—C14—C13114.8 (5)
C1—C2—C3119.1 (6)C9—C14—C13109.2 (5)
C1—C2—H2A120.5C8—C14—H14A106.5
C3—C2—H2A120.5C9—C14—H14A106.5
O3—C19—H19A109.5C13—C14—H14A106.5
O3—C19—H19B109.5N—C9—C10119.4 (5)
H19A—C19—H19B109.5N—C9—C14108.8 (5)
O3—C19—H19C109.5C10—C9—C14108.0 (5)
H19A—C19—H19C109.5N—C9—H9A106.7
H19B—C19—H19C109.5C10—C9—H9A106.7
N—C20—H20A109.5C14—C9—H9A106.7
N—C20—H20B109.5C9—C10—C11113.0 (5)
H20A—C20—H20B109.5C9—C10—H10A109.0
N—C20—H20C109.5C11—C10—H10A109.0
H20A—C20—H20C109.5C9—C10—H10B109.0
H20B—C20—H20C109.5C11—C10—H10B109.0
N—C15—C16112.4 (5)H10A—C10—H10B107.8
N—C15—H15A109.1
C17—O2—C3—C21.2 (12)C12—C13—C5—C6−59.6 (7)
C17—O2—C3—C4−173.7 (7)C14—C13—C5—C662.2 (6)
C18—O1—C4—C12127.8 (8)C16—C13—C5—C6176.6 (5)
C18—O1—C4—C3−64.2 (11)C13—C5—C6—O4139.7 (7)
O2—C3—C4—O111.0 (10)C13—C5—C6—C7−43.8 (7)
C2—C3—C4—O1−164.1 (7)C19—O3—C7—C8−1.0 (11)
O2—C3—C4—C12178.7 (6)C19—O3—C7—C6177.5 (6)
C2—C3—C4—C123.6 (9)O4—C6—C7—C8−172.3 (7)
O1—C4—C12—C11162.8 (6)C5—C6—C7—C811.0 (8)
C3—C4—C12—C11−5.2 (9)O4—C6—C7—O39.1 (9)
O1—C4—C12—C13−8.4 (9)C5—C6—C7—O3−167.6 (6)
C3—C4—C12—C13−176.4 (6)O3—C7—C8—C14177.1 (6)
C4—C12—C11—C14.2 (9)C6—C7—C8—C14−1.3 (9)
C13—C12—C11—C1175.3 (6)C7—C8—C14—C9150.3 (6)
C4—C12—C11—C10−176.7 (6)C7—C8—C14—C1324.5 (9)
C13—C12—C11—C10−5.6 (9)C12—C13—C14—C873.0 (6)
C12—C11—C1—C2−1.5 (10)C5—C13—C14—C8−52.0 (6)
C10—C11—C1—C2179.3 (6)C16—C13—C14—C8−169.4 (5)
C11—C1—C2—C3−0.2 (10)C12—C13—C14—C9−54.6 (6)
O2—C3—C2—C1−175.6 (7)C5—C13—C14—C9−179.6 (5)
C4—C3—C2—C1−0.8 (10)C16—C13—C14—C962.9 (6)
C20—N—C15—C16177.7 (6)C20—N—C9—C1062.0 (8)
C9—N—C15—C16−53.7 (7)C15—N—C9—C10−66.7 (7)
N—C15—C16—C1353.3 (6)C20—N—C9—C14−173.6 (5)
C11—C12—C13—C1423.7 (7)C15—N—C9—C1457.7 (6)
C4—C12—C13—C14−165.3 (5)C8—C14—C9—N168.2 (5)
C11—C12—C13—C5141.4 (6)C13—C14—C9—N−63.0 (6)
C4—C12—C13—C5−47.6 (8)C8—C14—C9—C10−61.0 (7)
C11—C12—C13—C16−93.2 (6)C13—C14—C9—C1067.9 (7)
C4—C12—C13—C1677.8 (7)N—C9—C10—C1176.5 (7)
C15—C16—C13—C1262.0 (6)C14—C9—C10—C11−48.2 (7)
C15—C16—C13—C14−57.5 (6)C12—C11—C10—C918.3 (9)
C15—C16—C13—C5−169.8 (5)C1—C11—C10—C9−162.5 (6)
D—H···AD—HH···AD···AD—H···A
C5—H5A···O10.972.232.853 (9)121
C16—H16B···O10.972.533.102 (10)118
C18—H18B···O20.962.142.812 (16)126
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5A⋯O10.972.232.853 (9)121
C16—H16B⋯O10.972.533.102 (10)118
C18—H18B⋯O20.962.142.812 (16)126
  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  5 in total

1.  (7R,8S,9S,12S)-1-(4-Chloro-benz-yloxy)-13,14-didehydro-12-hy-droxy-2,13-dimeth-oxy-N-methyl-morphinane.

Authors:  Xing-Liang Zheng; Ning-Fei Jiang; Hong-Sheng Gao; Dan Luo; Ai-Shun Ding
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-27

2.  (8S,9S,10R)-4-(4-Chloro-benz-yloxy)-7,8-didehydro-3,7-dimeth-oxy-17-methyl-morphinan-6-one monohydrate.

Authors:  Xing-Liang Zheng; Shu-Jun Chen; Ning-Fei Jiang; Sue-Hui Zhan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-22

3.  (9S,13R,14S)-7,8-Didehydro-4-(4-iodo-benz-yloxy)-3,7-dimeth-oxy-17-methyl-morphinan-6-one monohydrate.

Authors:  Xing-Liang Zheng; Ning-Fei Jiang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-20

4.  (9S,13R,14S)-7,8-Didehydro-4-(4-fluoro-benz-yloxy)-3,7-dimeth-oxy-17-methyl-morphinan-6-one sesquihydrate.

Authors:  Xing-Liang Zheng; Ning-Fei Jiang; Dan Luo; Hong-Sheng Gao; Ai-Shun Ding
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-09

5.  (7R,8S,9S,12S)-1-Benz-yloxy-13,14-didehydro-12-hy-droxy-2,13-dimeth-oxy-N-methyl-morphinane.

Authors:  Xing-Liang Zheng; Ning-Fei Jiang; Dan Luo; Hong-Sheng Gao; Ai-Shun Ding
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-17
  5 in total

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