Literature DB >> 21582427

Ethyl 2-(1,2,3,4-tetrahydro-spiro-[carba-zole-3,2'-[1,3]dioxolan]-9-yl)acetate.

Philipp M G Löffler1, Trond Ulven, Andrew D Bond.   

Abstract

In the title compound, C(18)H(21)NO(4), the hydrogenated six-membered ring of the carbazole unit adopts a half-chair conformation. The dioxolane ring and ethyl-acetate substituent point to opposite sides of the carbazole plane. The ethyl-acetate substituent adopts an essentially fully extended conformation, and its mean plane forms a dihedral angle of 83.8 (1)° with respect to the carbazole mean plane. The mol-ecules are arranged into stacks in which the carbazole planes form a dihedral angle of 4.4 (1)° and have an approximate inter-planar separation of 3.6 Å.

Entities:  

Year:  2009        PMID: 21582427      PMCID: PMC2969037          DOI: 10.1107/S160053680900748X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background literature and synthesis details, see: Ulven & Kostenis (2005 ▶, 2006 ▶). For a related structure, see: Bjerrum et al. (2009 ▶).

Experimental

Crystal data

C18H21NO4 M = 315.36 Monoclinic, a = 10.5533 (4) Å b = 17.3773 (6) Å c = 8.9637 (3) Å β = 105.629 (1)° V = 1583.05 (10) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 180 K 0.50 × 0.50 × 0.10 mm

Data collection

Bruker-Nonius X8 APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.847, T max = 0.991 25055 measured reflections 3851 independent reflections 3174 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.112 S = 1.04 3851 reflections 208 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680900748X/xu2485sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680900748X/xu2485Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H21NO4F(000) = 672
Mr = 315.36Dx = 1.323 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7203 reflections
a = 10.5533 (4) Åθ = 2.0–28.2°
b = 17.3773 (6) ŵ = 0.09 mm1
c = 8.9637 (3) ÅT = 180 K
β = 105.629 (1)°Plate, brown
V = 1583.05 (10) Å30.50 × 0.50 × 0.10 mm
Z = 4
Bruker-Nonius X8 APEXII CCD diffractometer3851 independent reflections
Radiation source: fine-focus sealed tube3174 reflections with I > 2σ(I)
graphiteRint = 0.025
thin–slice ω and φ scansθmax = 28.3°, θmin = 3.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −13→13
Tmin = 0.847, Tmax = 0.991k = −23→21
25055 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.112H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0568P)2 + 0.4296P] where P = (Fo2 + 2Fc2)/3
3851 reflections(Δ/σ)max < 0.001
208 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11.21234 (9)0.15818 (7)1.12008 (10)0.0460 (3)
O21.17774 (8)0.16828 (5)0.85930 (9)0.0310 (2)
O30.54620 (9)0.18009 (6)0.72948 (11)0.0431 (2)
O40.48419 (8)0.12028 (5)0.50032 (10)0.0319 (2)
N10.76683 (9)0.24098 (6)0.66065 (11)0.0269 (2)
C10.76918 (11)0.32014 (7)0.67550 (13)0.0271 (2)
C20.68683 (13)0.37599 (8)0.58858 (16)0.0375 (3)
H2A0.61370.36240.50480.045*
C30.71574 (15)0.45191 (8)0.62915 (18)0.0459 (3)
H3A0.66110.49120.57190.055*
C40.82262 (15)0.47257 (8)0.75148 (18)0.0428 (3)
H4A0.83990.52540.77560.051*
C50.90393 (13)0.41716 (7)0.83833 (15)0.0339 (3)
H5A0.97660.43160.92190.041*
C60.87768 (11)0.33951 (6)0.80135 (13)0.0263 (2)
C70.93961 (10)0.26886 (6)0.86264 (13)0.0256 (2)
C81.06186 (12)0.25587 (8)0.99027 (14)0.0324 (3)
H8A1.04270.26301.09160.039*
H8B1.12960.29400.98250.039*
C91.11382 (11)0.17469 (7)0.98003 (13)0.0305 (3)
C101.00563 (12)0.11489 (7)0.95185 (14)0.0334 (3)
H10A0.96250.11701.03710.040*
H10B1.04480.06310.95260.040*
C110.90183 (12)0.12724 (7)0.79701 (14)0.0311 (3)
H11A0.93590.10860.71090.037*
H11B0.82130.09770.79580.037*
C120.86989 (10)0.21090 (6)0.77637 (13)0.0255 (2)
C131.33628 (14)0.16069 (11)1.09153 (17)0.0486 (4)
H13A1.37740.10901.10430.058*
H13B1.39500.19681.16360.058*
C141.31189 (12)0.18790 (9)0.92705 (15)0.0398 (3)
H14A1.32570.24410.92280.048*
H14B1.37040.16120.87400.048*
C150.67326 (11)0.19717 (7)0.54503 (13)0.0290 (2)
H15A0.71920.15370.51070.035*
H15B0.63610.23040.45400.035*
C160.56219 (11)0.16596 (6)0.60498 (13)0.0264 (2)
C170.37837 (12)0.08256 (8)0.54942 (15)0.0373 (3)
H17A0.32300.12150.58260.045*
H17B0.41560.04770.63770.045*
C180.29786 (13)0.03789 (8)0.41509 (16)0.0407 (3)
H18A0.22590.01200.44500.061*
H18B0.3534−0.00060.38350.061*
H18C0.26130.07290.32850.061*
U11U22U33U12U13U23
O10.0307 (5)0.0794 (7)0.0284 (5)0.0149 (5)0.0090 (4)0.0144 (4)
O20.0270 (4)0.0428 (5)0.0261 (4)0.0009 (3)0.0119 (3)0.0002 (3)
O30.0339 (5)0.0658 (6)0.0338 (5)−0.0159 (4)0.0163 (4)−0.0132 (4)
O40.0255 (4)0.0388 (5)0.0317 (4)−0.0088 (3)0.0081 (3)−0.0039 (3)
N10.0220 (5)0.0306 (5)0.0275 (5)−0.0043 (4)0.0057 (4)−0.0010 (4)
C10.0241 (5)0.0308 (6)0.0295 (5)−0.0023 (4)0.0126 (4)0.0011 (4)
C20.0323 (6)0.0439 (7)0.0371 (6)0.0055 (5)0.0106 (5)0.0077 (5)
C30.0507 (8)0.0371 (7)0.0540 (8)0.0124 (6)0.0211 (7)0.0119 (6)
C40.0532 (8)0.0284 (6)0.0553 (8)0.0005 (6)0.0294 (7)−0.0007 (6)
C50.0356 (6)0.0329 (6)0.0385 (6)−0.0058 (5)0.0193 (5)−0.0072 (5)
C60.0247 (5)0.0302 (6)0.0280 (5)−0.0022 (4)0.0138 (4)−0.0017 (4)
C70.0227 (5)0.0307 (6)0.0256 (5)−0.0016 (4)0.0100 (4)−0.0027 (4)
C80.0264 (6)0.0425 (7)0.0270 (6)0.0004 (5)0.0051 (4)−0.0068 (5)
C90.0264 (6)0.0444 (7)0.0221 (5)0.0054 (5)0.0092 (4)0.0046 (5)
C100.0331 (6)0.0362 (6)0.0350 (6)0.0046 (5)0.0160 (5)0.0083 (5)
C110.0299 (6)0.0284 (6)0.0361 (6)−0.0026 (4)0.0109 (5)−0.0010 (5)
C120.0216 (5)0.0300 (6)0.0263 (5)−0.0019 (4)0.0088 (4)−0.0005 (4)
C130.0301 (7)0.0766 (11)0.0369 (7)−0.0055 (7)0.0054 (5)−0.0011 (7)
C140.0288 (6)0.0552 (8)0.0383 (7)−0.0054 (6)0.0142 (5)−0.0041 (6)
C150.0241 (5)0.0381 (6)0.0252 (5)−0.0066 (5)0.0073 (4)−0.0031 (5)
C160.0204 (5)0.0315 (6)0.0265 (5)−0.0005 (4)0.0050 (4)0.0002 (4)
C170.0277 (6)0.0442 (7)0.0404 (7)−0.0096 (5)0.0099 (5)0.0018 (6)
C180.0340 (7)0.0403 (7)0.0445 (7)−0.0114 (5)0.0049 (5)0.0023 (6)
O1—C131.3995 (17)C8—H8A0.990
O1—C91.4268 (14)C8—H8B0.990
O2—C141.4233 (15)C9—C101.5140 (18)
O2—C91.4254 (13)C10—C111.5340 (17)
O3—C161.1982 (14)C10—H10A0.990
O4—C161.3311 (14)C10—H10B0.990
O4—C171.4613 (14)C11—C121.4926 (16)
N1—C11.3817 (15)C11—H11A0.990
N1—C121.3872 (14)C11—H11B0.990
N1—C151.4412 (14)C13—C141.503 (2)
C1—C21.3926 (17)C13—H13A0.990
C1—C61.4146 (16)C13—H13B0.990
C2—C31.381 (2)C14—H14A0.990
C2—H2A0.950C14—H14B0.990
C3—C41.392 (2)C15—C161.5154 (15)
C3—H3A0.950C15—H15A0.990
C4—C51.382 (2)C15—H15B0.990
C4—H4A0.950C17—C181.4910 (18)
C5—C61.3993 (16)C17—H17A0.990
C5—H5A0.950C17—H17B0.990
C6—C71.4293 (16)C18—H18A0.980
C7—C121.3591 (16)C18—H18B0.980
C7—C81.4929 (15)C18—H18C0.980
C8—C91.5252 (18)
C13—O1—C9109.16 (9)H10A—C10—H10B107.9
C14—O2—C9106.09 (9)C12—C11—C10109.32 (10)
C16—O4—C17115.65 (9)C12—C11—H11A109.8
C1—N1—C12108.24 (9)C10—C11—H11A109.8
C1—N1—C15125.89 (10)C12—C11—H11B109.8
C12—N1—C15125.87 (10)C10—C11—H11B109.8
N1—C1—C2130.37 (11)H11A—C11—H11B108.3
N1—C1—C6107.66 (10)C7—C12—N1109.97 (10)
C2—C1—C6121.97 (11)C7—C12—C11125.57 (10)
C3—C2—C1117.28 (13)N1—C12—C11124.41 (10)
C3—C2—H2A121.4O1—C13—C14105.53 (11)
C1—C2—H2A121.4O1—C13—H13A110.6
C2—C3—C4121.92 (13)C14—C13—H13A110.6
C2—C3—H3A119.0O1—C13—H13B110.6
C4—C3—H3A119.0C14—C13—H13B110.6
C5—C4—C3120.83 (13)H13A—C13—H13B108.8
C5—C4—H4A119.6O2—C14—C13103.35 (10)
C3—C4—H4A119.6O2—C14—H14A111.1
C4—C5—C6119.03 (12)C13—C14—H14A111.1
C4—C5—H5A120.5O2—C14—H14B111.1
C6—C5—H5A120.5C13—C14—H14B111.1
C5—C6—C1118.98 (11)H14A—C14—H14B109.1
C5—C6—C7134.14 (11)N1—C15—C16112.31 (9)
C1—C6—C7106.87 (10)N1—C15—H15A109.1
C12—C7—C6107.24 (10)C16—C15—H15A109.1
C12—C7—C8123.20 (11)N1—C15—H15B109.1
C6—C7—C8129.47 (10)C16—C15—H15B109.1
C7—C8—C9110.13 (10)H15A—C15—H15B107.9
C7—C8—H8A109.6O3—C16—O4124.27 (10)
C9—C8—H8A109.6O3—C16—C15124.99 (10)
C7—C8—H8B109.6O4—C16—C15110.74 (9)
C9—C8—H8B109.6O4—C17—C18107.80 (10)
H8A—C8—H8B108.1O4—C17—H17A110.1
O2—C9—O1105.70 (9)C18—C17—H17A110.1
O2—C9—C10108.03 (10)O4—C17—H17B110.1
O1—C9—C10110.29 (10)C18—C17—H17B110.1
O2—C9—C8111.67 (10)H17A—C17—H17B108.5
O1—C9—C8108.76 (10)C17—C18—H18A109.5
C10—C9—C8112.19 (10)C17—C18—H18B109.5
C9—C10—C11112.18 (10)H18A—C18—H18B109.5
C9—C10—H10A109.2C17—C18—H18C109.5
C11—C10—H10A109.2H18A—C18—H18C109.5
C9—C10—H10B109.2H18B—C18—H18C109.5
C11—C10—H10B109.2
C12—N1—C1—C2−179.74 (11)C7—C8—C9—O276.13 (12)
C15—N1—C1—C20.15 (19)C7—C8—C9—O1−167.60 (9)
C12—N1—C1—C61.15 (12)C7—C8—C9—C10−45.32 (13)
C15—N1—C1—C6−178.96 (9)O2—C9—C10—C11−61.20 (12)
N1—C1—C2—C3−178.46 (12)O1—C9—C10—C11−176.27 (9)
C6—C1—C2—C30.54 (18)C8—C9—C10—C1162.32 (13)
C1—C2—C3—C40.1 (2)C9—C10—C11—C12−43.12 (13)
C2—C3—C4—C5−0.5 (2)C6—C7—C12—N10.87 (12)
C3—C4—C5—C60.20 (19)C8—C7—C12—N1−176.05 (9)
C4—C5—C6—C10.41 (16)C6—C7—C12—C11178.28 (10)
C4—C5—C6—C7179.11 (12)C8—C7—C12—C111.36 (17)
N1—C1—C6—C5178.40 (10)C1—N1—C12—C7−1.28 (12)
C2—C1—C6—C5−0.80 (16)C15—N1—C12—C7178.83 (10)
N1—C1—C6—C7−0.62 (11)C1—N1—C12—C11−178.72 (10)
C2—C1—C6—C7−179.82 (10)C15—N1—C12—C111.39 (16)
C5—C6—C7—C12−178.95 (12)C10—C11—C12—C712.73 (15)
C1—C6—C7—C12−0.15 (12)C10—C11—C12—N1−170.22 (10)
C5—C6—C7—C8−2.3 (2)C9—O1—C13—C145.60 (16)
C1—C6—C7—C8176.51 (11)C9—O2—C14—C1331.96 (14)
C12—C7—C8—C914.73 (15)O1—C13—C14—O2−23.07 (16)
C6—C7—C8—C9−161.45 (11)C1—N1—C15—C16−97.30 (13)
C14—O2—C9—O1−29.21 (13)C12—N1—C15—C1682.58 (13)
C14—O2—C9—C10−147.26 (10)C17—O4—C16—O3−3.87 (17)
C14—O2—C9—C888.91 (12)C17—O4—C16—C15176.02 (10)
C13—O1—C9—O214.11 (14)N1—C15—C16—O35.41 (17)
C13—O1—C9—C10130.64 (12)N1—C15—C16—O4−174.47 (9)
C13—O1—C9—C8−105.93 (13)C16—O4—C17—C18176.84 (10)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Minor structural modifications convert the dual TP/CRTH2 antagonist ramatroban into a highly selective and potent CRTH2 antagonist.

Authors:  Trond Ulven; Evi Kostenis
Journal:  J Med Chem       Date:  2005-02-24       Impact factor: 7.446

Review 3.  Targeting the prostaglandin D2 receptors DP and CRTH2 for treatment of inflammation.

Authors:  Trond Ulven; Evi Kostenis
Journal:  Curr Top Med Chem       Date:  2006       Impact factor: 3.295

4.  1,2-Di-hydro-spiro-[carbazole-3(4H),2'-[1,3]dioxolane].

Authors:  Janni Vester Bjerrum; Trond Ulven; Andrew D Bond
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-21
  4 in total
  1 in total

1.  4-Fluoro-N-methyl-N-(1,2,3,4-tetra-hydro-carbazol-3-yl)benzene-sulfonamide.

Authors:  Kaspar Gothardt Rasmussen; Trond Ulven; Andrew D Bond
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-11
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.