| Literature DB >> 21582422 |
Abstract
The title Schiff base compound, C(13)H(8)Cl(3)N(3)O(2), was synthesized by the condensation reaction of 3,5-dichloro-salicyl-aldehyde with 6-chloro-nicotinic acid hydrazide in 95% ethanol. The mol-ecule is nearly planar, with a dihedral angle of 1.9 (2)° between the aromatic ring planes, and an intra-molecular O-H⋯N hydrogen bond is observed. In the crystal, the mol-ecules are connected by inter-molecular N-H⋯O hydrogen bonds into infinite chains propagating in [100].Entities:
Year: 2009 PMID: 21582422 PMCID: PMC2968879 DOI: 10.1107/S1600536809007272
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H8Cl3N3O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 669 reflections |
| θ = 2.6–18.8° | |
| µ = 0.66 mm−1 | |
| β = 97.90 (3)° | Block, light yellow |
| 0.27 × 0.23 × 0.23 mm | |
| Siemens SMART CCD diffractometer | 2478 independent reflections |
| Radiation source: fine-focus sealed tube | 1323 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.1°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 7275 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2478 reflections | (Δ/σ)max = 0.001 |
| 191 parameters | Δρmax = 0.25 e Å−3 |
| 0 restraints | Δρmin = −0.40 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.3842 (2) | 0.62724 (6) | 0.45177 (7) | 0.0534 (3) | |
| Cl2 | 1.2166 (3) | 0.50424 (7) | 0.65897 (7) | 0.0651 (4) | |
| Cl3 | 1.2331 (3) | 1.28010 (7) | 0.69130 (8) | 0.0698 (4) | |
| N1 | 0.9665 (7) | 0.8466 (2) | 0.6071 (2) | 0.0471 (9) | |
| N2 | 1.0608 (7) | 0.91708 (18) | 0.6266 (2) | 0.0474 (9) | |
| H2 | 1.2318 | 0.9261 | 0.6437 | 0.057* | |
| O1 | 0.6119 (6) | 0.76626 (15) | 0.51866 (18) | 0.0542 (8) | |
| H1 | 0.6800 | 0.8046 | 0.5397 | 0.081* | |
| O2 | 0.6214 (6) | 0.95721 (16) | 0.59872 (19) | 0.0619 (9) | |
| C1 | 1.0059 (8) | 0.7165 (2) | 0.6081 (2) | 0.0408 (10) | |
| C2 | 0.7633 (8) | 0.7076 (2) | 0.5502 (2) | 0.0399 (10) | |
| C3 | 0.6750 (8) | 0.6374 (2) | 0.5262 (2) | 0.0411 (11) | |
| C4 | 0.8115 (8) | 0.5751 (2) | 0.5595 (3) | 0.0455 (11) | |
| H4 | 0.7479 | 0.5280 | 0.5428 | 0.055* | |
| C5 | 1.0456 (9) | 0.5834 (2) | 0.6182 (3) | 0.0461 (11) | |
| C6 | 1.1444 (9) | 0.6532 (2) | 0.6417 (3) | 0.0450 (11) | |
| H6 | 1.3036 | 0.6581 | 0.6801 | 0.054* | |
| C7 | 1.1106 (9) | 0.7906 (3) | 0.6314 (2) | 0.0452 (11) | |
| H7 | 1.2817 | 0.7964 | 0.6639 | 0.054* | |
| C8 | 0.8673 (9) | 0.9716 (2) | 0.6171 (3) | 0.0450 (11) | |
| C9 | 0.9672 (8) | 1.0483 (2) | 0.6324 (3) | 0.0410 (10) | |
| C10 | 0.8110 (9) | 1.1062 (2) | 0.5936 (3) | 0.0506 (12) | |
| H10 | 0.6519 | 1.0962 | 0.5566 | 0.061* | |
| C11 | 0.8935 (9) | 1.1786 (3) | 0.6102 (3) | 0.0543 (12) | |
| H11 | 0.7949 | 1.2183 | 0.5842 | 0.065* | |
| C12 | 1.1270 (9) | 1.1895 (2) | 0.6666 (3) | 0.0477 (12) | |
| N3 | 1.2807 (7) | 1.1365 (2) | 0.7059 (2) | 0.0502 (10) | |
| C13 | 1.1988 (9) | 1.0670 (2) | 0.6874 (3) | 0.0493 (11) | |
| H13 | 1.3051 | 1.0285 | 0.7133 | 0.059* |
| Cl1 | 0.0452 (7) | 0.0496 (7) | 0.0632 (8) | −0.0075 (6) | 0.0002 (5) | −0.0027 (6) |
| Cl2 | 0.0715 (9) | 0.0529 (8) | 0.0676 (8) | 0.0141 (7) | −0.0015 (6) | 0.0027 (6) |
| Cl3 | 0.0842 (10) | 0.0520 (8) | 0.0722 (9) | −0.0184 (7) | 0.0071 (7) | −0.0060 (7) |
| N1 | 0.040 (2) | 0.040 (2) | 0.062 (3) | −0.0058 (19) | 0.0091 (18) | −0.0038 (19) |
| N2 | 0.036 (2) | 0.037 (2) | 0.067 (3) | −0.0058 (19) | −0.0010 (18) | −0.0074 (19) |
| O1 | 0.0454 (19) | 0.045 (2) | 0.069 (2) | −0.0041 (16) | −0.0032 (15) | −0.0010 (16) |
| O2 | 0.0317 (19) | 0.060 (2) | 0.092 (2) | −0.0082 (16) | 0.0027 (16) | −0.0115 (18) |
| C1 | 0.030 (2) | 0.045 (3) | 0.048 (3) | −0.004 (2) | 0.010 (2) | −0.005 (2) |
| C2 | 0.034 (3) | 0.035 (3) | 0.050 (3) | −0.002 (2) | 0.005 (2) | −0.001 (2) |
| C3 | 0.030 (2) | 0.049 (3) | 0.043 (3) | −0.002 (2) | 0.0032 (19) | 0.000 (2) |
| C4 | 0.048 (3) | 0.038 (3) | 0.053 (3) | −0.005 (2) | 0.016 (2) | −0.003 (2) |
| C5 | 0.048 (3) | 0.047 (3) | 0.044 (3) | 0.006 (2) | 0.010 (2) | 0.002 (2) |
| C6 | 0.041 (3) | 0.049 (3) | 0.045 (3) | 0.005 (2) | 0.007 (2) | −0.004 (2) |
| C7 | 0.035 (3) | 0.053 (3) | 0.048 (3) | −0.007 (2) | 0.006 (2) | −0.008 (2) |
| C8 | 0.040 (3) | 0.046 (3) | 0.049 (3) | −0.008 (2) | 0.006 (2) | −0.005 (2) |
| C9 | 0.033 (3) | 0.041 (3) | 0.049 (3) | −0.005 (2) | 0.006 (2) | −0.005 (2) |
| C10 | 0.041 (3) | 0.053 (3) | 0.055 (3) | −0.008 (2) | −0.001 (2) | −0.001 (2) |
| C11 | 0.053 (3) | 0.048 (3) | 0.061 (3) | −0.003 (2) | 0.003 (2) | 0.006 (2) |
| C12 | 0.052 (3) | 0.046 (3) | 0.047 (3) | −0.015 (2) | 0.013 (2) | −0.001 (2) |
| N3 | 0.043 (2) | 0.048 (3) | 0.057 (2) | −0.004 (2) | −0.0001 (18) | −0.006 (2) |
| C13 | 0.043 (3) | 0.044 (3) | 0.061 (3) | −0.002 (2) | 0.004 (2) | −0.006 (2) |
| Cl1—C3 | 1.739 (4) | C4—C5 | 1.389 (5) |
| Cl2—C5 | 1.736 (4) | C4—H4 | 0.9300 |
| Cl3—C12 | 1.742 (4) | C5—C6 | 1.382 (5) |
| N1—C7 | 1.263 (5) | C6—H6 | 0.9300 |
| N1—N2 | 1.372 (4) | C7—H7 | 0.9300 |
| N2—C8 | 1.358 (5) | C8—C9 | 1.474 (5) |
| N2—H2 | 0.8600 | C9—C13 | 1.380 (5) |
| O1—C2 | 1.349 (4) | C9—C10 | 1.391 (5) |
| O1—H1 | 0.8200 | C10—C11 | 1.380 (6) |
| O2—C8 | 1.227 (5) | C10—H10 | 0.9300 |
| C1—C6 | 1.396 (5) | C11—C12 | 1.373 (6) |
| C1—C2 | 1.414 (5) | C11—H11 | 0.9300 |
| C1—C7 | 1.460 (5) | C12—N3 | 1.321 (5) |
| C2—C3 | 1.375 (5) | N3—C13 | 1.337 (5) |
| C3—C4 | 1.376 (5) | C13—H13 | 0.9300 |
| C7—N1—N2 | 120.9 (4) | N1—C7—C1 | 119.3 (4) |
| C8—N2—N1 | 115.9 (4) | N1—C7—H7 | 120.3 |
| C8—N2—H2 | 122.1 | C1—C7—H7 | 120.3 |
| N1—N2—H2 | 122.1 | O2—C8—N2 | 121.3 (4) |
| C2—O1—H1 | 109.5 | O2—C8—C9 | 122.0 (4) |
| C6—C1—C2 | 118.8 (4) | N2—C8—C9 | 116.7 (4) |
| C6—C1—C7 | 120.8 (4) | C13—C9—C10 | 117.2 (4) |
| C2—C1—C7 | 120.4 (4) | C13—C9—C8 | 124.0 (4) |
| O1—C2—C3 | 118.6 (4) | C10—C9—C8 | 118.6 (4) |
| O1—C2—C1 | 121.8 (4) | C11—C10—C9 | 119.6 (4) |
| C3—C2—C1 | 119.5 (4) | C11—C10—H10 | 120.2 |
| C2—C3—C4 | 121.5 (4) | C9—C10—H10 | 120.2 |
| C2—C3—Cl1 | 119.1 (3) | C12—C11—C10 | 117.3 (4) |
| C4—C3—Cl1 | 119.4 (3) | C12—C11—H11 | 121.4 |
| C3—C4—C5 | 119.3 (4) | C10—C11—H11 | 121.4 |
| C3—C4—H4 | 120.4 | N3—C12—C11 | 125.5 (4) |
| C5—C4—H4 | 120.4 | N3—C12—Cl3 | 115.8 (3) |
| C6—C5—C4 | 120.6 (4) | C11—C12—Cl3 | 118.7 (4) |
| C6—C5—Cl2 | 120.8 (4) | C12—N3—C13 | 115.9 (4) |
| C4—C5—Cl2 | 118.6 (3) | N3—C13—C9 | 124.5 (4) |
| C5—C6—C1 | 120.3 (4) | N3—C13—H13 | 117.7 |
| C5—C6—H6 | 119.9 | C9—C13—H13 | 117.7 |
| C1—C6—H6 | 119.9 |
| H··· | ||||
| N2—H2···O2i | 0.86 | 2.20 | 2.930 (4) | 142 |
| O1—H1···N1 | 0.82 | 1.82 | 2.540 (4) | 147 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O2i | 0.86 | 2.20 | 2.930 (4) | 142 |
| O1—H1⋯N1 | 0.82 | 1.82 | 2.540 (4) | 147 |
Symmetry code: (i) .