| Literature DB >> 21582420 |
Deng-Ze Wu, Miao-Chang Liu, Hua-Yue Wu, Xiao-Bo Huang, Jian-Jun Li.
Abstract
In the title compound, 6C(9)H(10)N(4)S·H(2)O, the dihedral angle between the five-memberedEntities:
Year: 2009 PMID: 21582420 PMCID: PMC2969018 DOI: 10.1107/S1600536808041056
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 6C9H10N4S·H2O | |
| Mo | |
| Hexagonal, | Cell parameters from 2375 reflections |
| Hall symbol: -R 3 | θ = 2.2–23.0° |
| µ = 0.27 mm−1 | |
| Prism, colorless | |
| 0.32 × 0.23 × 0.15 mm | |
| Bruker SMART CCD area-detector diffractometer | 2011 independent reflections |
| Radiation source: fine-focus sealed tube | 1647 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.5°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 8946 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2011 reflections | (Δ/σ)max < 0.001 |
| 137 parameters | Δρmax = 0.70 e Å−3 |
| 0 restraints | Δρmin = −0.27 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| S1 | 1.03285 (6) | 0.89151 (5) | 0.71331 (11) | 0.0608 (4) | |
| O1W | 0.645 (2) | 0.348 (3) | 0.356 (2) | 0.095 (12) | 0.166667 |
| H1W | 0.6667 | 0.3333 | 0.3967 | 0.142* | 0.50 |
| H2W | 0.6439 | 0.3779 | 0.3102 | 0.142* | 0.166667 |
| N1 | 1.08197 (15) | 0.83742 (16) | 0.5409 (3) | 0.0520 (8) | |
| N2 | 1.05881 (15) | 0.77523 (16) | 0.4828 (3) | 0.0501 (8) | |
| N3 | 0.98055 (13) | 0.76822 (14) | 0.6086 (3) | 0.0381 (7) | |
| N4 | 0.92266 (14) | 0.74747 (15) | 0.6827 (3) | 0.0457 (8) | |
| H4A | 0.8918 | 0.7438 | 0.6318 | 0.055* | |
| H4B | 0.9136 | 0.7090 | 0.7124 | 0.055* | |
| C1 | 1.1062 (3) | 0.9644 (2) | 0.6516 (5) | 0.0809 (15) | |
| H1A | 1.1442 | 0.9579 | 0.6578 | 0.121* | |
| H1B | 1.1146 | 1.0031 | 0.7001 | 0.121* | |
| H1C | 1.0989 | 0.9709 | 0.5642 | 0.121* | |
| C2 | 1.03399 (18) | 0.83096 (18) | 0.6157 (3) | 0.0433 (9) | |
| C3 | 0.99830 (17) | 0.73476 (18) | 0.5243 (3) | 0.0410 (8) | |
| C4 | 0.95704 (18) | 0.66410 (18) | 0.4868 (3) | 0.0427 (8) | |
| C5 | 0.8903 (2) | 0.6366 (2) | 0.4557 (4) | 0.0555 (10) | |
| H5 | 0.8695 | 0.6622 | 0.4626 | 0.067* | |
| C6 | 0.8543 (2) | 0.5711 (2) | 0.4142 (5) | 0.0726 (13) | |
| H6 | 0.8092 | 0.5526 | 0.3935 | 0.087* | |
| C7 | 0.8845 (3) | 0.5333 (2) | 0.4034 (5) | 0.0783 (14) | |
| H7 | 0.8600 | 0.4892 | 0.3746 | 0.094* | |
| C8 | 0.9510 (3) | 0.5600 (2) | 0.4349 (5) | 0.0689 (13) | |
| H8 | 0.9714 | 0.5341 | 0.4276 | 0.083* | |
| C9 | 0.9874 (2) | 0.6252 (2) | 0.4773 (4) | 0.0524 (10) | |
| H9 | 1.0322 | 0.6431 | 0.4996 | 0.063* |
| S1 | 0.0603 (7) | 0.0493 (6) | 0.0676 (7) | 0.0236 (5) | 0.0099 (5) | −0.0071 (5) |
| O1W | 0.050 (15) | 0.09 (3) | 0.100 (18) | 0.001 (10) | 0.041 (12) | −0.015 (14) |
| N1 | 0.0389 (17) | 0.0496 (19) | 0.060 (2) | 0.0166 (15) | 0.0097 (15) | 0.0029 (15) |
| N2 | 0.0428 (18) | 0.0512 (19) | 0.0565 (19) | 0.0236 (15) | 0.0112 (14) | 0.0018 (15) |
| N3 | 0.0322 (14) | 0.0406 (16) | 0.0436 (16) | 0.0197 (13) | 0.0060 (12) | 0.0054 (12) |
| N4 | 0.0378 (16) | 0.0474 (17) | 0.0534 (19) | 0.0225 (14) | 0.0097 (13) | 0.0090 (14) |
| C1 | 0.079 (3) | 0.044 (2) | 0.095 (4) | 0.012 (2) | 0.013 (3) | −0.005 (2) |
| C2 | 0.0404 (19) | 0.0412 (19) | 0.048 (2) | 0.0203 (16) | 0.0030 (16) | 0.0040 (15) |
| C3 | 0.0404 (19) | 0.045 (2) | 0.0417 (19) | 0.0245 (16) | 0.0027 (15) | 0.0037 (15) |
| C4 | 0.048 (2) | 0.045 (2) | 0.0392 (19) | 0.0258 (17) | 0.0067 (15) | 0.0056 (15) |
| C5 | 0.050 (2) | 0.053 (2) | 0.069 (3) | 0.029 (2) | −0.0036 (19) | −0.005 (2) |
| C6 | 0.056 (3) | 0.057 (3) | 0.100 (4) | 0.025 (2) | −0.012 (2) | −0.012 (3) |
| C7 | 0.080 (3) | 0.048 (3) | 0.102 (4) | 0.028 (2) | 0.000 (3) | −0.014 (2) |
| C8 | 0.081 (3) | 0.060 (3) | 0.081 (3) | 0.047 (3) | 0.010 (3) | 0.001 (2) |
| C9 | 0.055 (2) | 0.056 (2) | 0.054 (2) | 0.033 (2) | 0.0063 (18) | 0.0038 (18) |
| S1—C2 | 1.743 (4) | N4—H4B | 0.8600 |
| S1—C1 | 1.804 (5) | C1—H1A | 0.9600 |
| O1W—O1Wi | 0.88 (3) | C1—H1B | 0.9600 |
| O1W—O1Wii | 0.88 (3) | C1—H1C | 0.9600 |
| O1W—O1Wiii | 1.28 (4) | C3—C4 | 1.470 (5) |
| O1W—O1Wiv | 1.28 (4) | C4—C5 | 1.378 (5) |
| O1W—O1Wv | 1.55 (4) | C4—C9 | 1.388 (5) |
| O1W—H1W | 0.8501 | C5—C6 | 1.379 (6) |
| O1W—H2W | 0.8500 | C5—H5 | 0.9300 |
| N1—C2 | 1.302 (5) | C6—C7 | 1.365 (7) |
| N1—N2 | 1.395 (5) | C6—H6 | 0.9300 |
| N2—C3 | 1.305 (5) | C7—C8 | 1.375 (7) |
| N3—C2 | 1.352 (5) | C7—H7 | 0.9300 |
| N3—C3 | 1.364 (4) | C8—C9 | 1.377 (6) |
| N3—N4 | 1.406 (4) | C8—H8 | 0.9300 |
| N4—H4A | 0.8601 | C9—H9 | 0.9300 |
| C2—S1—C1 | 98.7 (2) | S1—C1—H1C | 109.5 |
| O1Wi—O1W—O1Wii | 93 (4) | H1A—C1—H1C | 109.5 |
| O1Wi—O1W—O1Wiii | 89.994 (4) | H1B—C1—H1C | 109.5 |
| O1Wii—O1W—O1Wiv | 89.995 (9) | N1—C2—N3 | 110.8 (3) |
| O1Wiii—O1W—O1Wiv | 60.000 (8) | N1—C2—S1 | 128.0 (3) |
| O1Wi—O1W—O1Wv | 55.4 (9) | N3—C2—S1 | 121.2 (3) |
| O1Wii—O1W—O1Wv | 55.4 (9) | N2—C3—N3 | 109.2 (3) |
| O1Wi—O1W—H1W | 85.0 | N2—C3—C4 | 124.7 (3) |
| O1Wii—O1W—H1W | 85.0 | N3—C3—C4 | 126.1 (3) |
| O1Wv—O1W—H1W | 48.2 | C5—C4—C9 | 119.5 (4) |
| O1Wi—O1W—H2W | 67.8 | C5—C4—C3 | 121.8 (3) |
| O1Wii—O1W—H2W | 108.1 | C9—C4—C3 | 118.6 (3) |
| O1Wiii—O1W—H2W | 144.8 | C4—C5—C6 | 119.9 (4) |
| O1Wiv—O1W—H2W | 110.0 | C4—C5—H5 | 120.0 |
| O1Wv—O1W—H2W | 117.3 | C6—C5—H5 | 120.0 |
| H1W—O1W—H2W | 149.9 | C7—C6—C5 | 120.4 (4) |
| C2—N1—N2 | 106.3 (3) | C7—C6—H6 | 119.8 |
| C3—N2—N1 | 108.1 (3) | C5—C6—H6 | 119.8 |
| C2—N3—C3 | 105.6 (3) | C6—C7—C8 | 120.1 (4) |
| C2—N3—N4 | 122.3 (3) | C6—C7—H7 | 119.9 |
| C3—N3—N4 | 132.0 (3) | C8—C7—H7 | 119.9 |
| N3—N4—H4A | 106.6 | C7—C8—C9 | 120.1 (4) |
| N3—N4—H4B | 104.5 | C7—C8—H8 | 120.0 |
| H4A—N4—H4B | 111.3 | C9—C8—H8 | 120.0 |
| S1—C1—H1A | 109.5 | C8—C9—C4 | 119.9 (4) |
| S1—C1—H1B | 109.5 | C8—C9—H9 | 120.1 |
| H1A—C1—H1B | 109.5 | C4—C9—H9 | 120.1 |
| C2—N1—N2—C3 | 0.4 (4) | N4—N3—C3—C4 | 1.5 (6) |
| N2—N1—C2—N3 | −0.6 (4) | N2—C3—C4—C5 | −135.3 (4) |
| N2—N1—C2—S1 | −179.7 (3) | N3—C3—C4—C5 | 45.9 (5) |
| C3—N3—C2—N1 | 0.6 (4) | N2—C3—C4—C9 | 41.9 (5) |
| N4—N3—C2—N1 | 178.1 (3) | N3—C3—C4—C9 | −137.0 (4) |
| C3—N3—C2—S1 | 179.7 (2) | C9—C4—C5—C6 | −0.7 (6) |
| N4—N3—C2—S1 | −2.7 (5) | C3—C4—C5—C6 | 176.4 (4) |
| C1—S1—C2—N1 | 11.9 (4) | C4—C5—C6—C7 | −0.2 (7) |
| C1—S1—C2—N3 | −167.1 (3) | C5—C6—C7—C8 | 0.6 (8) |
| N1—N2—C3—N3 | −0.1 (4) | C6—C7—C8—C9 | −0.1 (8) |
| N1—N2—C3—C4 | −179.1 (3) | C7—C8—C9—C4 | −0.8 (7) |
| C2—N3—C3—N2 | −0.3 (4) | C5—C4—C9—C8 | 1.2 (6) |
| N4—N3—C3—N2 | −177.5 (3) | C3—C4—C9—C8 | −176.0 (4) |
| C2—N3—C3—C4 | 178.7 (3) |
| H··· | ||||
| N4—H4A···N1vi | 0.86 | 2.30 | 3.127 (4) | 162 |
| N4—H4B···N2vii | 0.86 | 2.21 | 3.060 (4) | 172 |
| C5—H5···N1vi | 0.93 | 2.60 | 3.507 (6) | 167 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H4 | 0.86 | 2.30 | 3.127 (4) | 162 |
| N4—H4 | 0.86 | 2.21 | 3.060 (4) | 172 |
| C5—H5⋯N1i | 0.93 | 2.60 | 3.507 (6) | 167 |
Symmetry codes: (i) ; (ii) .