Literature DB >> 21582402

Aqua-(dicyanamido)-{μ-6,6'-dimeth-oxy-2,2'-[ethane-1,2-diylbis(nitrilo-methyl-i-dyne)]diphenolato}copper(II)sodium(I).

Yong-Miao Shen, Wei Wang.   

Abstract

The mol-ecule of the title compound, [CuNa(C(18)H(18)N(2)O(4))(C(2)N(3))(H(2)O)], is almost planar, the maximum deviation from the mol-ecular plane being 0.48 (4) Å. The coordination environment of the Cu(2+) ion is distorted square-planar and it is N(2)O(2)-chelated by the Schiff base ligand. The Na(+) cation has a distorted octahedral environment defined by the four O atoms of the 6,6'-dimeth-oxy-2,2'-[ethane-1,2-diylbis(nitrilo-methyl-idyne)]diphenolate ligand, a water ligand and a dicyanamide anion.

Entities:  

Year:  2009        PMID: 21582402      PMCID: PMC2969014          DOI: 10.1107/S1600536809011064

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For chemical background, see: Ohba & Okawa (2000 ▶). For related structures, see: Correia et al. (2005 ▶); Costes et al.(2004 ▶).

Experimental

Crystal data

[CuNa(C18H18N2O4)(C2N3)(H2O)] M = 496.94 Monoclinic, a = 7.5974 (14) Å b = 22.999 (4) Å c = 12.876 (3) Å β = 101.986 (4)° V = 2200.7 (7) Å3 Z = 4 Mo Kα radiation μ = 1.05 mm−1 T = 293 K 0.23 × 0.21 × 0.19 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.794, T max = 0.825 11729 measured reflections 4314 independent reflections 2996 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.142 S = 1.03 4314 reflections 291 parameters 54 restraints H-atom parameters constrained Δρmax = 0.41 e Å−3 Δρmin = −0.49 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809011064/hg2492sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809011064/hg2492Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CuNa(C18H18N2O4)(C2N3)(H2O)]F(000) = 1020
Mr = 496.94Dx = 1.500 Mg m3Dm = 1.500 Mg m3Dm measured by not measured
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3562 reflections
a = 7.5974 (14) Åθ = 2.8–25.0°
b = 22.999 (4) ŵ = 1.05 mm1
c = 12.876 (3) ÅT = 293 K
β = 101.986 (4)°Block, blue
V = 2200.7 (7) Å30.23 × 0.21 × 0.19 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer4314 independent reflections
Radiation source: fine-focus sealed tube2996 reflections with I > 2σ(I)
graphiteRint = 0.034
φ and ω scansθmax = 26.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −9→8
Tmin = 0.794, Tmax = 0.825k = −27→28
11729 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.142H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0747P)2 + 0.4736P] where P = (Fo2 + 2Fc2)/3
4314 reflections(Δ/σ)max = 0.001
291 parametersΔρmax = 0.41 e Å3
54 restraintsΔρmin = −0.49 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.24890 (6)0.506744 (19)0.06032 (4)0.04808 (19)
Na10.36641 (19)0.38275 (6)0.20334 (11)0.0492 (4)
O10.2721 (4)0.48218 (10)0.1952 (2)0.0513 (6)
O20.3153 (4)0.42658 (12)0.3689 (2)0.0705 (8)
O30.3315 (3)0.43211 (10)0.03987 (18)0.0472 (6)
O40.4284 (4)0.32308 (11)0.0497 (2)0.0619 (7)
O50.1622 (4)0.30926 (12)0.2164 (2)0.0690 (8)
H5B0.12860.28760.16680.083*
H5A0.10300.30440.26140.083*
N10.1661 (4)0.58079 (13)0.0845 (3)0.0549 (8)
N20.2233 (4)0.52876 (15)−0.0761 (3)0.0556 (8)
N30.9191 (5)0.2881 (2)0.3649 (3)0.0874 (10)
N40.6425 (6)0.3426 (2)0.2955 (3)0.0896 (11)
N51.0355 (6)0.26675 (19)0.5447 (3)0.0868 (12)
C10.1804 (5)0.57156 (17)0.2676 (4)0.0603 (11)
C20.2396 (5)0.51238 (16)0.2741 (3)0.0492 (9)
C30.2601 (6)0.48344 (18)0.3710 (3)0.0592 (10)
C40.2247 (7)0.5129 (2)0.4559 (4)0.0818 (15)
H40.23710.49380.52070.098*
C50.1700 (8)0.5713 (3)0.4488 (5)0.0953 (17)
H50.14930.59030.50890.114*
C60.1479 (7)0.5995 (2)0.3589 (4)0.0807 (14)
H60.11050.63810.35530.097*
C70.1477 (6)0.60141 (17)0.1718 (4)0.0656 (12)
H70.10900.63980.17240.079*
C80.3386 (8)0.3935 (2)0.4617 (3)0.0885 (16)
H8A0.42100.41290.51750.133*
H8B0.38610.35600.44940.133*
H8C0.22480.38870.48200.133*
C90.3045 (5)0.4367 (2)−0.1448 (3)0.0630 (11)
C100.3413 (5)0.40704 (17)−0.0485 (3)0.0482 (9)
C110.3903 (5)0.34713 (18)−0.0474 (3)0.0575 (10)
C120.4003 (7)0.3185 (2)−0.1381 (4)0.0846 (15)
H120.43100.2794−0.13640.101*
C130.3647 (9)0.3482 (4)−0.2317 (5)0.112 (2)
H130.37150.3289−0.29430.134*
C140.3192 (8)0.4058 (3)−0.2353 (4)0.0973 (18)
H140.29740.4249−0.30040.117*
C150.2507 (5)0.4971 (2)−0.1515 (3)0.0637 (12)
H150.23470.5145−0.21810.076*
C160.4985 (7)0.26442 (18)0.0605 (4)0.0851 (15)
H16A0.40740.23790.02600.128*
H16B0.53310.25470.13450.128*
H16C0.60140.26180.02830.128*
C170.1101 (7)0.6168 (2)−0.0103 (4)0.0847 (15)
H17A−0.02010.6196−0.02810.102*
H17B0.15900.65570.00290.102*
C180.1742 (8)0.5909 (2)−0.0959 (4)0.0906 (16)
H18A0.27890.6122−0.10720.109*
H18B0.08190.5939−0.16020.109*
C190.7693 (7)0.3174 (2)0.3323 (3)0.0738 (10)
C200.9740 (6)0.2781 (2)0.4624 (4)0.0659 (10)
U11U22U33U12U13U23
Cu10.0467 (3)0.0467 (3)0.0492 (3)−0.0028 (2)0.0064 (2)0.0091 (2)
Na10.0568 (9)0.0453 (8)0.0444 (8)0.0046 (7)0.0079 (6)0.0042 (6)
O10.0734 (18)0.0380 (13)0.0434 (14)0.0046 (12)0.0140 (12)0.0000 (11)
O20.115 (3)0.0577 (17)0.0409 (15)0.0092 (17)0.0201 (15)0.0046 (13)
O30.0575 (15)0.0475 (14)0.0362 (13)0.0008 (12)0.0090 (11)0.0018 (11)
O40.0793 (19)0.0461 (15)0.0653 (19)0.0003 (13)0.0264 (15)−0.0075 (13)
O50.088 (2)0.0678 (18)0.0566 (17)−0.0200 (16)0.0264 (15)−0.0101 (14)
N10.0471 (18)0.0396 (17)0.074 (2)−0.0016 (14)0.0039 (16)0.0128 (16)
N20.0464 (18)0.063 (2)0.053 (2)−0.0063 (15)0.0016 (15)0.0218 (17)
N30.076 (2)0.125 (2)0.0618 (19)0.0281 (19)0.0156 (17)0.0111 (19)
N40.077 (2)0.121 (3)0.065 (2)0.025 (2)0.0029 (17)0.0089 (19)
N50.097 (3)0.087 (3)0.071 (2)0.019 (2)0.003 (2)0.015 (2)
C10.056 (2)0.050 (2)0.072 (3)0.0021 (19)0.008 (2)−0.019 (2)
C20.051 (2)0.047 (2)0.050 (2)−0.0018 (17)0.0113 (17)−0.0081 (17)
C30.065 (3)0.065 (3)0.049 (2)−0.002 (2)0.0145 (19)−0.011 (2)
C40.095 (4)0.104 (4)0.047 (3)0.000 (3)0.015 (2)−0.017 (2)
C50.113 (4)0.098 (4)0.076 (4)0.009 (4)0.024 (3)−0.043 (3)
C60.083 (3)0.068 (3)0.089 (4)0.016 (3)0.015 (3)−0.031 (3)
C70.061 (3)0.037 (2)0.093 (4)0.0035 (19)0.003 (2)−0.006 (2)
C80.126 (4)0.097 (4)0.046 (3)0.000 (3)0.026 (3)0.019 (2)
C90.044 (2)0.102 (4)0.043 (2)−0.003 (2)0.0081 (17)−0.002 (2)
C100.040 (2)0.068 (2)0.037 (2)−0.0084 (18)0.0090 (15)−0.0053 (18)
C110.055 (2)0.066 (3)0.056 (3)−0.010 (2)0.0186 (19)−0.019 (2)
C120.089 (4)0.091 (4)0.075 (3)−0.002 (3)0.022 (3)−0.031 (3)
C130.119 (5)0.160 (6)0.059 (4)0.019 (5)0.024 (3)−0.037 (4)
C140.099 (4)0.158 (6)0.036 (3)0.007 (4)0.017 (2)−0.008 (3)
C150.048 (2)0.101 (4)0.040 (2)−0.006 (2)0.0053 (18)0.019 (2)
C160.110 (4)0.044 (2)0.109 (4)−0.001 (2)0.041 (3)−0.011 (2)
C170.079 (3)0.074 (3)0.099 (4)0.016 (3)0.014 (3)0.046 (3)
C180.109 (4)0.079 (3)0.079 (4)0.001 (3)0.009 (3)0.036 (3)
C190.069 (2)0.103 (3)0.0486 (19)0.016 (2)0.0115 (18)0.0103 (19)
C200.062 (2)0.082 (2)0.0536 (19)0.0124 (18)0.0107 (17)0.0120 (19)
Cu1—O11.799 (2)C3—C41.360 (6)
Cu1—N21.800 (3)C4—C51.404 (7)
Cu1—N11.864 (3)C4—H40.9300
Cu1—O31.865 (2)C5—C61.306 (7)
Na1—O52.324 (3)C5—H50.9300
Na1—O32.357 (3)C6—H60.9300
Na1—N42.373 (4)C7—H70.9300
Na1—O12.392 (3)C8—H8A0.9600
Na1—O22.461 (3)C8—H8B0.9600
Na1—O42.531 (3)C8—H8C0.9600
O1—C21.297 (4)C9—C141.389 (7)
O2—C31.375 (5)C9—C101.392 (5)
O2—C81.397 (5)C9—C151.446 (6)
O3—C101.292 (4)C10—C111.427 (6)
O4—C111.343 (5)C11—C121.356 (6)
O4—C161.446 (5)C12—C131.363 (8)
O5—H5B0.8078C12—H120.9300
O5—H5A0.8118C13—C141.368 (9)
N1—C71.254 (6)C13—H130.9300
N1—C171.463 (5)C14—H140.9300
N2—C151.264 (5)C15—H150.9300
N2—C181.485 (6)C16—H16A0.9600
N3—C201.260 (5)C16—H16B0.9600
N3—C191.314 (6)C16—H16C0.9600
N4—C191.139 (5)C17—C181.426 (7)
N5—C201.097 (5)C17—H17A0.9700
C1—C71.389 (6)C17—H17B0.9700
C1—C61.406 (6)C18—H18A0.9700
C1—C21.430 (5)C18—H18B0.9700
C2—C31.393 (6)
O1—Cu1—N2177.98 (13)C6—C5—C4121.0 (5)
O1—Cu1—N195.42 (13)C6—C5—H5119.5
N2—Cu1—N186.24 (16)C4—C5—H5119.5
O1—Cu1—O383.04 (10)C5—C6—C1120.1 (5)
N2—Cu1—O395.30 (14)C5—C6—H6120.0
N1—Cu1—O3178.45 (13)C1—C6—H6120.0
O5—Na1—O3117.51 (11)N1—C7—C1125.2 (4)
O5—Na1—N4102.41 (15)N1—C7—H7117.4
O3—Na1—N4123.91 (13)C1—C7—H7117.4
O5—Na1—O1120.00 (11)O2—C8—H8A109.5
O3—Na1—O161.53 (9)O2—C8—H8B109.5
N4—Na1—O1128.31 (15)H8A—C8—H8B109.5
O5—Na1—O290.42 (11)O2—C8—H8C109.5
O3—Na1—O2124.57 (10)H8A—C8—H8C109.5
N4—Na1—O290.49 (13)H8B—C8—H8C109.5
O1—Na1—O263.05 (9)C14—C9—C10117.4 (5)
O5—Na1—O484.12 (10)C14—C9—C15120.8 (5)
O3—Na1—O464.40 (9)C10—C9—C15121.8 (4)
N4—Na1—O483.75 (13)O3—C10—C9121.9 (4)
O1—Na1—O4125.91 (10)O3—C10—C11119.0 (3)
O2—Na1—O4171.02 (11)C9—C10—C11119.1 (4)
C2—O1—Cu1126.3 (2)O4—C11—C12124.2 (4)
C2—O1—Na1125.6 (2)O4—C11—C10114.4 (3)
Cu1—O1—Na1108.12 (11)C12—C11—C10121.4 (4)
C3—O2—C8119.1 (3)C11—C12—C13118.9 (5)
C3—O2—Na1120.7 (2)C11—C12—H12120.6
C8—O2—Na1120.2 (3)C13—C12—H12120.6
C10—O3—Cu1128.2 (2)C12—C13—C14121.2 (5)
C10—O3—Na1123.7 (2)C12—C13—H13119.4
Cu1—O3—Na1107.21 (11)C14—C13—H13119.4
C11—O4—C16118.6 (3)C13—C14—C9122.1 (5)
C11—O4—Na1117.7 (2)C13—C14—H14119.0
C16—O4—Na1123.7 (3)C9—C14—H14119.0
Na1—O5—H5B119.8N2—C15—C9126.6 (4)
Na1—O5—H5A128.9N2—C15—H15116.7
H5B—O5—H5A110.5C9—C15—H15116.7
C7—N1—C17117.8 (4)O4—C16—H16A109.5
C7—N1—Cu1126.8 (3)O4—C16—H16B109.5
C17—N1—Cu1115.3 (3)H16A—C16—H16B109.5
C15—N2—C18119.8 (4)O4—C16—H16C109.5
C15—N2—Cu1125.9 (3)H16A—C16—H16C109.5
C18—N2—Cu1114.2 (3)H16B—C16—H16C109.5
C20—N3—C19119.8 (4)C18—C17—N1108.8 (4)
C19—N4—Na1171.6 (5)C18—C17—H17A109.9
C7—C1—C6119.1 (4)N1—C17—H17A109.9
C7—C1—C2121.2 (4)C18—C17—H17B109.9
C6—C1—C2119.6 (4)N1—C17—H17B109.9
O1—C2—C3116.2 (3)H17A—C17—H17B108.3
O1—C2—C1124.9 (4)C17—C18—N2112.5 (4)
C3—C2—C1118.8 (4)C17—C18—H18A109.1
C4—C3—O2126.9 (4)N2—C18—H18A109.1
C4—C3—C2118.5 (4)C17—C18—H18B109.1
O2—C3—C2114.5 (3)N2—C18—H18B109.1
C3—C4—C5121.9 (5)H18A—C18—H18B107.8
C3—C4—H4119.0N4—C19—N3174.1 (5)
C5—C4—H4119.0N5—C20—N3173.2 (5)
D—H···AD—HH···AD···AD—H···A
O5—H5B···N5i0.812.022.826 (5)178
O5—H5A···N3ii0.812.152.961 (5)173
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5B⋯N5i0.812.022.826 (5)178
O5—H5A⋯N3ii0.812.152.961 (5)173

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, structure, and magnetic properties of heterometallic dicyanamide-bridged Cu-Na and Cu-Gd one-dimensional polymers.

Authors:  Jean-Pierre Costes; Ghenadie Novitchi; Sergiu Shova; Françoise Dahan; Bruno Donnadieu; Jean-Pierre Tuchagues
Journal:  Inorg Chem       Date:  2004-11-29       Impact factor: 5.165

  2 in total

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