| Literature DB >> 21582393 |
Rüdiger W Seidel1, Iris M Oppel.
Abstract
The crystal structure of the title compound, [Cu(2)Cl(4)(C(10)H(8)N(2)O(2)S)(2)(H(2)O)(2)], comprises neutral centrosymmetric μ-chloride-bridged dinuclear units. Each Cu(II) ion is penta-coordinated by three chloride ligands, a pyridine N-oxide O atom and a water mol-ecule. Intra- and inter-molecular O-H⋯O hydrogen bonds occur between the coordinated water mol-ecules and the uncoordinated and coordinated pyridine N-oxide groups of the 2,2'-thio-bis(pyridine N-oxide) ligands, respectively.Entities:
Year: 2009 PMID: 21582393 PMCID: PMC2968806 DOI: 10.1107/S1600536809011076
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu2Cl4(C10H8N2O2S)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| θ = 5.1–18.0° | |
| µ = 2.19 mm−1 | |
| β = 95.516 (17)° | Prism, dark-yellow |
| 0.27 × 0.21 × 0.19 mm | |
| Siemens P4 four-circle diffractometer | 1736 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.0°, θmin = 2.1° |
| ω scans | |
| Absorption correction: ψ scan (ABSPsiScan in | |
| 3316 measured reflections | 3 standard reflections every 97 reflections |
| 2349 independent reflections | intensity decay: none |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2349 reflections | (Δ/σ)max < 0.001 |
| 178 parameters | Δρmax = 0.40 e Å−3 |
| 2 restraints | Δρmin = −0.53 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 0.36057 (7) | 0.52270 (5) | 0.07537 (3) | 0.02340 (16) | |
| Cl1 | 0.42569 (17) | 0.52142 (11) | 0.20449 (6) | 0.0365 (3) | |
| Cl2 | 0.34708 (15) | 0.57187 (10) | −0.05629 (6) | 0.0273 (3) | |
| S1 | 0.42443 (17) | 0.79699 (11) | 0.11518 (7) | 0.0343 (3) | |
| O1 | 0.1176 (4) | 0.6210 (3) | 0.07498 (15) | 0.0272 (7) | |
| O2 | 0.1784 (5) | 0.3623 (3) | 0.05848 (18) | 0.0325 (8) | |
| H2A | 0.086 (5) | 0.372 (4) | 0.026 (2) | 0.039* | |
| H2B | 0.231 (7) | 0.305 (3) | 0.040 (2) | 0.039* | |
| N1 | 0.0804 (5) | 0.6857 (3) | 0.13620 (19) | 0.0250 (8) | |
| C2 | −0.0843 (6) | 0.6616 (4) | 0.1706 (2) | 0.0290 (11) | |
| H2 | −0.1683 | 0.6013 | 0.1521 | 0.035* | |
| C3 | −0.1287 (7) | 0.7269 (4) | 0.2335 (3) | 0.0378 (12) | |
| H3 | −0.2435 | 0.7108 | 0.2572 | 0.045* | |
| C4 | −0.0060 (7) | 0.8142 (4) | 0.2611 (3) | 0.0386 (12) | |
| H4 | −0.0342 | 0.8569 | 0.3043 | 0.046* | |
| C5 | 0.1619 (7) | 0.8391 (4) | 0.2242 (3) | 0.0352 (11) | |
| H5 | 0.2461 | 0.8996 | 0.2423 | 0.042* | |
| C6 | 0.2049 (6) | 0.7744 (4) | 0.1606 (2) | 0.0250 (10) | |
| O11 | 0.6518 (4) | 0.8360 (3) | 0.00176 (19) | 0.0412 (9) | |
| N11 | 0.4647 (5) | 0.8581 (3) | −0.0254 (2) | 0.0315 (9) | |
| C12 | 0.3202 (7) | 0.8442 (4) | 0.0239 (2) | 0.0276 (11) | |
| C13 | 0.1254 (6) | 0.8656 (4) | −0.0018 (2) | 0.0292 (11) | |
| H13 | 0.0267 | 0.8566 | 0.0315 | 0.035* | |
| C14 | 0.0761 (7) | 0.9005 (4) | −0.0771 (3) | 0.0378 (12) | |
| H14 | −0.0560 | 0.9141 | −0.0951 | 0.045* | |
| C15 | 0.2246 (8) | 0.9151 (4) | −0.1254 (3) | 0.0425 (13) | |
| H15 | 0.1930 | 0.9400 | −0.1761 | 0.051* | |
| C16 | 0.4167 (8) | 0.8932 (4) | −0.0992 (3) | 0.0395 (13) | |
| H16 | 0.5161 | 0.9024 | −0.1322 | 0.047* |
| Cu1 | 0.0210 (3) | 0.0273 (3) | 0.0224 (3) | 0.0022 (3) | 0.0041 (2) | −0.0021 (2) |
| Cl1 | 0.0376 (7) | 0.0499 (7) | 0.0224 (6) | 0.0122 (6) | 0.0045 (5) | 0.0007 (5) |
| Cl2 | 0.0246 (6) | 0.0331 (6) | 0.0249 (6) | 0.0063 (5) | 0.0050 (4) | −0.0017 (5) |
| S1 | 0.0216 (6) | 0.0443 (7) | 0.0370 (7) | −0.0053 (6) | 0.0028 (5) | 0.0023 (6) |
| O1 | 0.0223 (16) | 0.0342 (17) | 0.0250 (16) | 0.0056 (14) | 0.0018 (13) | −0.0109 (14) |
| O2 | 0.0259 (19) | 0.0323 (19) | 0.038 (2) | −0.0022 (16) | −0.0030 (15) | −0.0023 (16) |
| N1 | 0.0210 (19) | 0.029 (2) | 0.0253 (19) | 0.0026 (17) | 0.0042 (16) | −0.0004 (17) |
| C2 | 0.021 (2) | 0.031 (3) | 0.036 (3) | −0.001 (2) | 0.006 (2) | 0.000 (2) |
| C3 | 0.029 (3) | 0.053 (3) | 0.033 (3) | 0.006 (3) | 0.008 (2) | −0.001 (2) |
| C4 | 0.046 (3) | 0.042 (3) | 0.030 (3) | 0.008 (3) | 0.011 (2) | −0.006 (2) |
| C5 | 0.041 (3) | 0.028 (3) | 0.037 (3) | −0.005 (2) | −0.001 (2) | −0.005 (2) |
| C6 | 0.019 (2) | 0.030 (2) | 0.027 (2) | 0.001 (2) | 0.0029 (19) | 0.0001 (19) |
| O11 | 0.0196 (17) | 0.047 (2) | 0.059 (2) | −0.0015 (16) | 0.0111 (16) | −0.0083 (17) |
| N11 | 0.023 (2) | 0.026 (2) | 0.047 (2) | −0.0057 (17) | 0.0112 (18) | −0.0080 (19) |
| C12 | 0.028 (3) | 0.022 (2) | 0.035 (3) | −0.008 (2) | 0.011 (2) | −0.007 (2) |
| C13 | 0.020 (2) | 0.032 (3) | 0.037 (3) | −0.002 (2) | 0.012 (2) | −0.002 (2) |
| C14 | 0.037 (3) | 0.037 (3) | 0.040 (3) | −0.002 (2) | 0.002 (2) | 0.007 (2) |
| C15 | 0.048 (3) | 0.049 (3) | 0.030 (3) | −0.006 (3) | 0.007 (2) | 0.002 (2) |
| C16 | 0.049 (3) | 0.045 (3) | 0.028 (3) | −0.010 (3) | 0.020 (2) | −0.004 (2) |
| Cu1—O1 | 1.988 (3) | C3—H3 | 0.9300 |
| Cu1—O2 | 2.212 (3) | C4—C5 | 1.386 (6) |
| Cu1—Cl1 | 2.2443 (12) | C4—H4 | 0.9300 |
| Cu1—Cl2i | 2.3031 (12) | C5—C6 | 1.384 (6) |
| Cu1—Cl2 | 2.3489 (12) | C5—H5 | 0.9300 |
| Cl2—Cu1i | 2.3031 (12) | O11—N11 | 1.331 (5) |
| S1—C12 | 1.758 (5) | N11—C16 | 1.353 (6) |
| S1—C6 | 1.764 (4) | N11—C12 | 1.369 (5) |
| O1—N1 | 1.339 (4) | C12—C13 | 1.370 (6) |
| O2—H2A | 0.81 (2) | C13—C14 | 1.378 (6) |
| O2—H2B | 0.82 (2) | C13—H13 | 0.9300 |
| N1—C2 | 1.341 (5) | C14—C15 | 1.379 (6) |
| N1—C6 | 1.359 (5) | C14—H14 | 0.9300 |
| C2—C3 | 1.381 (6) | C15—C16 | 1.357 (7) |
| C2—H2 | 0.9300 | C15—H15 | 0.9300 |
| C3—C4 | 1.355 (7) | C16—H16 | 0.9300 |
| O1—Cu1—O2 | 91.10 (12) | C3—C4—H4 | 120.4 |
| O1—Cu1—Cl1 | 95.13 (8) | C5—C4—H4 | 120.4 |
| O2—Cu1—Cl1 | 100.39 (9) | C6—C5—C4 | 120.3 (4) |
| O1—Cu1—Cl2i | 169.61 (9) | C6—C5—H5 | 119.9 |
| O2—Cu1—Cl2i | 93.77 (9) | C4—C5—H5 | 119.9 |
| Cl1—Cu1—Cl2i | 93.00 (4) | N1—C6—C5 | 118.5 (4) |
| O1—Cu1—Cl2 | 84.65 (8) | N1—C6—S1 | 119.4 (3) |
| O2—Cu1—Cl2 | 95.75 (9) | C5—C6—S1 | 121.9 (3) |
| Cl1—Cu1—Cl2 | 163.86 (5) | O11—N11—C16 | 121.7 (4) |
| Cl2i—Cu1—Cl2 | 85.74 (4) | O11—N11—C12 | 117.8 (4) |
| Cu1i—Cl2—Cu1 | 94.26 (4) | C16—N11—C12 | 120.5 (4) |
| C12—S1—C6 | 99.6 (2) | N11—C12—C13 | 119.7 (4) |
| N1—O1—Cu1 | 121.8 (2) | N11—C12—S1 | 110.7 (3) |
| Cu1—O2—H2A | 111 (4) | C13—C12—S1 | 129.6 (3) |
| Cu1—O2—H2B | 117 (3) | C12—C13—C14 | 119.9 (4) |
| H2A—O2—H2B | 100 (5) | C12—C13—H13 | 120.1 |
| O1—N1—C2 | 117.9 (4) | C14—C13—H13 | 120.1 |
| O1—N1—C6 | 120.1 (3) | C13—C14—C15 | 119.3 (5) |
| C2—N1—C6 | 122.0 (4) | C13—C14—H14 | 120.3 |
| N1—C2—C3 | 119.6 (4) | C15—C14—H14 | 120.3 |
| N1—C2—H2 | 120.2 | C16—C15—C14 | 120.1 (5) |
| C3—C2—H2 | 120.2 | C16—C15—H15 | 120.0 |
| C4—C3—C2 | 120.4 (4) | C14—C15—H15 | 120.0 |
| C4—C3—H3 | 119.8 | N11—C16—C15 | 120.5 (4) |
| C2—C3—H3 | 119.8 | N11—C16—H16 | 119.7 |
| C3—C4—C5 | 119.2 (4) | C15—C16—H16 | 119.7 |
| H··· | ||||
| O2—H2A···O1ii | 0.81 (2) | 2.13 (2) | 2.919 (4) | 167 (5) |
| O2—H2B···O11i | 0.82 (2) | 1.97 (2) | 2.789 (5) | 177 (5) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2 | 0.81 (2) | 2.13 (2) | 2.919 (4) | 167 (5) |
| O2—H2 | 0.82 (2) | 1.97 (2) | 2.789 (5) | 177 (5) |
Symmetry codes: (i) ; (ii) .