| Literature DB >> 21582392 |
A Dudko1, V Bon, A Kozachkova, V Pekhnyo.
Abstract
The title compound, [Zn(C(2)H(8)NO(6)P(2))(2)(H(2)O)(4)]·4H(2)O, was synthesized by the reaction of ZnCl(2) with 1-amino-ethane-1,1-diyldiphospho-nic acid in aqueous solution. The asymmetric unit contains one-half of the complex and two water mol-ecules of solvation. The Zn atom occupies a special position on an inversion centre. This results in a slightly distorted octa-hedral coordination environment, which consists of the O atoms from two phospho-nic acids and four water mol-ecules. The crystal structure displays N-H⋯O and O-H⋯O hydrogen bonding, which creates a three-dimensional network.Entities:
Year: 2009 PMID: 21582392 PMCID: PMC2969005 DOI: 10.1107/S1600536809010599
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C2H8NO6P2)2(H2O)4]·4H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2105 reflections | |
| θ = 2.3–25.9° | |
| µ = 1.50 mm−1 | |
| α = 96.440 (3)° | |
| β = 90.788 (3)° | Block, colourless |
| γ = 102.080 (3)° | 0.36 × 0.10 × 0.04 mm |
| Bruker APEXII CCD diffractometer | 2244 independent reflections |
| Radiation source: fine-focus sealed tube | 1747 reflections with |
| graphite | |
| Detector resolution: 8.26 pixels mm-1 | θmax = 26.4°, θmin = 2.3° |
| φ and ω scans | |
| Absorption correction: numerical ( | |
| 8897 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2244 reflections | (Δ/σ)max < 0.001 |
| 182 parameters | Δρmax = 0.39 e Å−3 |
| 1 restraint | Δρmin = −0.47 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Zn1 | 0.0000 | 0.5000 | 0.5000 | 0.01171 (16) | |
| P1 | 0.02405 (14) | 0.80873 (8) | 0.37915 (7) | 0.01033 (19) | |
| P2 | −0.00669 (14) | 0.81048 (9) | 0.09143 (7) | 0.0116 (2) | |
| C1 | 0.1808 (5) | 0.8672 (3) | 0.2381 (3) | 0.0109 (6) | |
| C2 | 0.2791 (6) | 1.0348 (3) | 0.2544 (3) | 0.0176 (7) | |
| H2A | 0.3983 | 1.0614 | 0.3248 | 0.026* | |
| H2B | 0.1461 | 1.0855 | 0.2716 | 0.026* | |
| H2C | 0.3557 | 1.0644 | 0.1770 | 0.026* | |
| N1 | 0.3905 (5) | 0.7921 (3) | 0.2240 (3) | 0.0133 (6) | |
| H1A | 0.483 (6) | 0.830 (4) | 0.160 (3) | 0.020* | |
| H1B | 0.349 (6) | 0.699 (4) | 0.208 (3) | 0.020* | |
| H1C | 0.485 (6) | 0.807 (4) | 0.295 (3) | 0.020* | |
| O1 | −0.0090 (4) | 0.6449 (2) | 0.37040 (19) | 0.0135 (5) | |
| O2 | 0.2165 (4) | 0.8783 (2) | 0.4886 (2) | 0.0143 (5) | |
| H2O | 0.206 (6) | 0.956 (4) | 0.519 (3) | 0.017* | |
| O3 | −0.1966 (4) | 0.8741 (2) | 0.39210 (19) | 0.0139 (5) | |
| O4 | −0.0857 (4) | 0.6470 (2) | 0.0759 (2) | 0.0181 (5) | |
| O5 | 0.1793 (4) | 0.8548 (2) | −0.0123 (2) | 0.0148 (5) | |
| H5O | 0.182 (6) | 0.931 (3) | −0.039 (3) | 0.018* | |
| O6 | −0.1990 (4) | 0.8997 (2) | 0.0930 (2) | 0.0156 (5) | |
| O7 | 0.1908 (4) | 0.3844 (3) | 0.3764 (2) | 0.0183 (5) | |
| H71 | 0.319 (7) | 0.371 (4) | 0.408 (3) | 0.022* | |
| H72 | 0.204 (7) | 0.413 (4) | 0.312 (4) | 0.022* | |
| O8 | 0.3234 (4) | 0.6366 (3) | 0.5883 (2) | 0.0152 (5) | |
| H81 | 0.311 (6) | 0.719 (4) | 0.571 (3) | 0.018* | |
| H82 | 0.300 (6) | 0.633 (4) | 0.667 (4) | 0.018* | |
| O9 | 0.2666 (4) | 0.6106 (3) | 0.8304 (2) | 0.0181 (5) | |
| H91 | 0.228 (6) | 0.681 (4) | 0.882 (3) | 0.022* | |
| H92 | 0.189 (6) | 0.532 (4) | 0.852 (3) | 0.022* | |
| O10 | 0.3107 (4) | 0.4849 (3) | 0.1490 (2) | 0.0187 (5) | |
| H101 | 0.236 (6) | 0.448 (4) | 0.079 (4) | 0.022* | |
| H102 | 0.437 (7) | 0.460 (4) | 0.143 (3) | 0.022* |
| Zn1 | 0.0117 (3) | 0.0109 (3) | 0.0129 (3) | 0.0029 (2) | 0.0003 (2) | 0.0021 (2) |
| P1 | 0.0105 (4) | 0.0103 (4) | 0.0105 (4) | 0.0031 (3) | 0.0003 (3) | 0.0009 (3) |
| P2 | 0.0115 (4) | 0.0125 (4) | 0.0116 (4) | 0.0031 (3) | −0.0009 (3) | 0.0035 (3) |
| C1 | 0.0096 (15) | 0.0088 (15) | 0.0146 (16) | 0.0030 (12) | 0.0003 (12) | 0.0007 (12) |
| C2 | 0.0208 (18) | 0.0114 (16) | 0.0183 (18) | −0.0021 (13) | 0.0001 (14) | 0.0017 (13) |
| N1 | 0.0105 (14) | 0.0155 (15) | 0.0134 (15) | 0.0010 (12) | −0.0017 (11) | 0.0032 (12) |
| O1 | 0.0179 (12) | 0.0093 (11) | 0.0133 (12) | 0.0028 (9) | 0.0007 (9) | 0.0011 (8) |
| O2 | 0.0164 (12) | 0.0141 (12) | 0.0129 (12) | 0.0067 (10) | −0.0032 (9) | −0.0032 (9) |
| O3 | 0.0118 (11) | 0.0150 (12) | 0.0154 (12) | 0.0049 (9) | −0.0013 (9) | −0.0004 (9) |
| O4 | 0.0224 (13) | 0.0143 (12) | 0.0158 (12) | 0.0001 (9) | −0.0047 (10) | 0.0013 (9) |
| O5 | 0.0187 (12) | 0.0118 (12) | 0.0167 (12) | 0.0061 (10) | 0.0061 (9) | 0.0080 (9) |
| O6 | 0.0113 (11) | 0.0206 (12) | 0.0178 (12) | 0.0060 (9) | 0.0024 (9) | 0.0092 (9) |
| O7 | 0.0186 (13) | 0.0225 (13) | 0.0162 (13) | 0.0090 (10) | −0.0004 (11) | 0.0043 (10) |
| O8 | 0.0146 (12) | 0.0139 (12) | 0.0181 (13) | 0.0034 (10) | −0.0017 (10) | 0.0054 (10) |
| O9 | 0.0201 (13) | 0.0148 (12) | 0.0199 (13) | 0.0042 (10) | 0.0041 (10) | 0.0025 (10) |
| O10 | 0.0152 (13) | 0.0239 (13) | 0.0176 (13) | 0.0072 (11) | −0.0022 (10) | −0.0004 (10) |
| Zn1—O1 | 2.050 (2) | C2—H2A | 0.9800 |
| Zn1—O1i | 2.050 (2) | C2—H2B | 0.9800 |
| Zn1—O7i | 2.071 (2) | C2—H2C | 0.9800 |
| Zn1—O7 | 2.071 (2) | N1—H1A | 0.93 (4) |
| Zn1—O8i | 2.141 (2) | N1—H1B | 0.85 (4) |
| Zn1—O8 | 2.141 (2) | N1—H1C | 0.90 (4) |
| P1—O1 | 1.492 (2) | O2—H2O | 0.78 (3) |
| P1—O3 | 1.504 (2) | O5—H5O | 0.793 (18) |
| P1—O2 | 1.575 (2) | O7—H71 | 0.84 (4) |
| P1—C1 | 1.839 (3) | O7—H72 | 0.76 (4) |
| P2—O4 | 1.486 (2) | O8—H81 | 0.82 (4) |
| P2—O6 | 1.503 (2) | O8—H82 | 0.86 (4) |
| P2—O5 | 1.571 (2) | O9—H91 | 0.87 (4) |
| P2—C1 | 1.846 (3) | O9—H92 | 0.83 (4) |
| C1—N1 | 1.502 (4) | O10—H101 | 0.85 (4) |
| C1—C2 | 1.535 (4) | O10—H102 | 0.80 (4) |
| O1—Zn1—O1i | 179.999 (1) | N1—C1—P1 | 107.2 (2) |
| O1—Zn1—O7i | 90.77 (9) | C2—C1—P1 | 110.6 (2) |
| O1i—Zn1—O7i | 89.23 (9) | N1—C1—P2 | 106.55 (19) |
| O1—Zn1—O7 | 89.23 (9) | C2—C1—P2 | 110.3 (2) |
| O1i—Zn1—O7 | 90.77 (9) | P1—C1—P2 | 113.58 (16) |
| O7i—Zn1—O7 | 180.00 (11) | C1—C2—H2A | 109.5 |
| O1—Zn1—O8i | 88.74 (9) | C1—C2—H2B | 109.5 |
| O1i—Zn1—O8i | 91.26 (9) | H2A—C2—H2B | 109.5 |
| O7i—Zn1—O8i | 92.46 (9) | C1—C2—H2C | 109.5 |
| O7—Zn1—O8i | 87.54 (9) | H2A—C2—H2C | 109.5 |
| O1—Zn1—O8 | 91.27 (9) | H2B—C2—H2C | 109.5 |
| O1i—Zn1—O8 | 88.73 (9) | C1—N1—H1A | 108 (2) |
| O7i—Zn1—O8 | 87.54 (9) | C1—N1—H1B | 114 (2) |
| O7—Zn1—O8 | 92.46 (9) | H1A—N1—H1B | 110 (3) |
| O8i—Zn1—O8 | 180.0 | C1—N1—H1C | 113 (2) |
| O1—P1—O3 | 118.11 (12) | H1A—N1—H1C | 108 (3) |
| O1—P1—O2 | 107.82 (12) | H1B—N1—H1C | 104 (3) |
| O3—P1—O2 | 111.01 (12) | P1—O1—Zn1 | 133.80 (13) |
| O1—P1—C1 | 107.13 (13) | P1—O2—H2O | 115 (3) |
| O3—P1—C1 | 108.84 (13) | P2—O5—H5O | 118 (3) |
| O2—P1—C1 | 102.79 (13) | Zn1—O7—H71 | 113 (2) |
| O4—P2—O6 | 117.67 (13) | Zn1—O7—H72 | 114 (3) |
| O4—P2—O5 | 108.21 (12) | H71—O7—H72 | 114 (4) |
| O6—P2—O5 | 110.56 (12) | Zn1—O8—H81 | 101 (2) |
| O4—P2—C1 | 108.34 (13) | Zn1—O8—H82 | 103 (2) |
| O6—P2—C1 | 108.52 (13) | H81—O8—H82 | 108 (3) |
| O5—P2—C1 | 102.44 (13) | H91—O9—H92 | 106 (3) |
| N1—C1—C2 | 108.4 (3) | H101—O10—H102 | 103 (3) |
| O1—P1—C1—N1 | −47.7 (2) | O6—P2—C1—C2 | −54.5 (2) |
| O3—P1—C1—N1 | −176.47 (18) | O5—P2—C1—C2 | 62.5 (2) |
| O2—P1—C1—N1 | 65.8 (2) | O4—P2—C1—P1 | −58.45 (19) |
| O1—P1—C1—C2 | −165.7 (2) | O6—P2—C1—P1 | 70.38 (18) |
| O3—P1—C1—C2 | 65.6 (2) | O5—P2—C1—P1 | −172.68 (15) |
| O2—P1—C1—C2 | −52.2 (2) | O3—P1—O1—Zn1 | −92.94 (19) |
| O1—P1—C1—P2 | 69.67 (18) | O2—P1—O1—Zn1 | 33.8 (2) |
| O3—P1—C1—P2 | −59.08 (18) | C1—P1—O1—Zn1 | 143.85 (17) |
| O2—P1—C1—P2 | −176.85 (15) | O7i—Zn1—O1—P1 | 41.88 (18) |
| O4—P2—C1—N1 | 59.3 (2) | O7—Zn1—O1—P1 | −138.12 (18) |
| O6—P2—C1—N1 | −171.88 (19) | O8i—Zn1—O1—P1 | 134.32 (18) |
| O5—P2—C1—N1 | −54.9 (2) | O8—Zn1—O1—P1 | −45.68 (18) |
| O4—P2—C1—C2 | 176.7 (2) |
| H··· | ||||
| N1—H1A···O6ii | 0.93 (4) | 1.96 (4) | 2.796 (4) | 150 (3) |
| N1—H1B···O10 | 0.85 (4) | 1.99 (4) | 2.827 (4) | 168 (3) |
| N1—H1C···O3ii | 0.90 (4) | 2.01 (4) | 2.851 (3) | 153 (3) |
| O2—H2O···O3iii | 0.78 (3) | 1.76 (3) | 2.536 (3) | 172 (4) |
| O5—H5O···O6iv | 0.79 (2) | 1.73 (2) | 2.519 (3) | 177 (4) |
| O7—H71···O8v | 0.84 (4) | 2.05 (4) | 2.826 (3) | 155 (3) |
| O7—H72···O10 | 0.76 (4) | 2.00 (4) | 2.748 (3) | 168 (4) |
| O8—H81···O2 | 0.82 (4) | 1.97 (4) | 2.772 (3) | 163 (3) |
| O8—H82···O9 | 0.86 (4) | 1.79 (4) | 2.646 (3) | 174 (3) |
| O9—H91···O5vi | 0.87 (4) | 1.94 (4) | 2.810 (3) | 172 (3) |
| O9—H92···O4i | 0.83 (4) | 1.91 (4) | 2.715 (3) | 165 (4) |
| O10—H101···O4vii | 0.85 (4) | 1.90 (4) | 2.744 (3) | 175 (3) |
| O10—H102···O9v | 0.80 (4) | 1.96 (4) | 2.741 (3) | 167 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.93 (4) | 1.96 (4) | 2.796 (4) | 150 (3) |
| N1—H1 | 0.85 (4) | 1.99 (4) | 2.827 (4) | 168 (3) |
| N1—H1 | 0.90 (4) | 2.01 (4) | 2.851 (3) | 153 (3) |
| O2—H2 | 0.78 (3) | 1.76 (3) | 2.536 (3) | 172 (4) |
| O5—H5 | 0.793 (18) | 1.726 (19) | 2.519 (3) | 177 (4) |
| O7—H71⋯O8iv | 0.84 (4) | 2.05 (4) | 2.826 (3) | 155 (3) |
| O7—H72⋯O10 | 0.76 (4) | 2.00 (4) | 2.748 (3) | 168 (4) |
| O8—H81⋯O2 | 0.82 (4) | 1.97 (4) | 2.772 (3) | 163 (3) |
| O8—H82⋯O9 | 0.86 (4) | 1.79 (4) | 2.646 (3) | 174 (3) |
| O9—H91⋯O5v | 0.87 (4) | 1.94 (4) | 2.810 (3) | 172 (3) |
| O9—H92⋯O4vi | 0.83 (4) | 1.91 (4) | 2.715 (3) | 165 (4) |
| O10—H101⋯O4vii | 0.85 (4) | 1.90 (4) | 2.744 (3) | 175 (3) |
| O10—H102⋯O9iv | 0.80 (4) | 1.96 (4) | 2.741 (3) | 167 (4) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .