Literature DB >> 21582370

Poly[bis-(cyanato-κN)bis-(μ-pyrazine-κN:N')cobalt(II)].

Mario Wriedt1, Inke Jess, Christian Näther.   

Abstract

In the crystal structure of the title compound, [Co(NCO)(2)(C(4)H(4)N(2))(2)](n), the Co(II) cation is coordinated by four N-bonded pyrazine ligands and two N-bonded cyanate anions in a slightly distorted octa-hedral geometry. The crystal structure consists of μ-N:N' pyrazine-bridged cobalt cyanate chains; these are further linked by additional μ-N:N'-bridging pyrazine ligands into layers, which are stacked perpendicular to the crystallographic a axis. The C and O atoms in both crystallographic independent cyanate anions are disordered in two orientations and were refined using a split model with site occupation factor ratios of 0.75/0.25 and 0.7/0.3.

Entities:  

Year:  2009        PMID: 21582370      PMCID: PMC2968858          DOI: 10.1107/S1600536809005686

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related pyrazine structures, see: Lloret et al. (1999 ▶); Real et al. (1991 ▶); Lu et al. (1997 ▶); Wriedt et al. (2009 ▶). For general background, see: Näther & Greve (2003 ▶); Näther et al. (2003 ▶); Wriedt et al. (2008 ▶, 2009 ▶); Näther et al. (2007 ▶); Näther & Jess (2004 ▶).

Experimental

Crystal data

[Co(NCO)2(C4H4N2)2] M = 303.15 Monoclinic, a = 25.5712 (17) Å b = 10.1230 (8) Å c = 10.1863 (7) Å β = 104.763 (8)° V = 2549.8 (3) Å3 Z = 8 Mo Kα radiation μ = 1.35 mm−1 T = 170 K 0.24 × 0.14 × 0.07 mm

Data collection

Stoe IPDS-1 diffractometer Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008 ▶) T min = 0.789, T max = 0.903 11369 measured reflections 2684 independent reflections 2058 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.139 S = 1.04 2684 reflections 198 parameters H-atom parameters constrained Δρmax = 0.71 e Å−3 Δρmin = −1.17 e Å−3 Data collection: X-AREA (Stoe & Cie, 2008 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: XCIF in SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809005686/bt2872sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005686/bt2872Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(NCO)2(C4H4N2)2]F(000) = 1224
Mr = 303.15Dx = 1.579 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 8000 reflections
a = 25.5712 (17) Åθ = 14.1–25.9°
b = 10.1230 (8) ŵ = 1.35 mm1
c = 10.1863 (7) ÅT = 170 K
β = 104.763 (8)°Block, yellow
V = 2549.8 (3) Å30.24 × 0.14 × 0.07 mm
Z = 8
Stoe IPDS-1 diffractometer2684 independent reflections
Radiation source: fine-focus sealed tube2058 reflections with I > 2σ(I)
graphiteRint = 0.039
φ scansθmax = 27.1°, θmin = 2.9°
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008)h = −32→32
Tmin = 0.789, Tmax = 0.903k = −12→12
11369 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.139H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0575P)2 + 18.631P] where P = (Fo2 + 2Fc2)/3
2684 reflections(Δ/σ)max = 0.001
198 parametersΔρmax = 0.71 e Å3
0 restraintsΔρmin = −1.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Co10.629290 (19)0.75059 (4)0.63502 (4)0.01326 (17)
N10.62838 (13)0.5943 (3)0.7846 (3)0.0162 (6)
C10.66193 (17)0.5983 (3)0.9072 (4)0.0224 (8)
H10.68680.66950.92970.027*
C20.66194 (17)0.5014 (4)1.0044 (3)0.0224 (8)
H20.68640.50881.09160.027*
N20.62829 (13)0.3981 (3)0.9778 (3)0.0171 (6)
C30.59444 (17)0.3935 (4)0.8537 (3)0.0230 (8)
H30.57000.32150.83050.028*
C40.59412 (17)0.4920 (4)0.7578 (4)0.0225 (8)
H40.56900.48640.67140.027*
N110.63140 (13)0.9093 (3)0.4902 (3)0.0163 (6)
C110.67047 (17)0.9151 (4)0.4247 (4)0.0228 (8)
H110.69920.85280.44610.027*
C120.67008 (17)1.0102 (3)0.3260 (4)0.0222 (8)
H120.69841.01100.28100.027*
N120.63094 (13)1.1005 (3)0.2930 (3)0.0167 (6)
C130.59214 (17)1.0958 (4)0.3588 (4)0.0259 (9)
H130.56371.15900.33810.031*
C140.59239 (18)1.0000 (4)0.4575 (4)0.0259 (9)
H140.56410.99930.50250.031*
N210.54684 (14)0.7557 (3)0.5817 (3)0.0238 (7)
C210.5047 (3)0.7083 (8)0.5445 (8)0.0347 (16)0.75
O210.4602 (3)0.6596 (9)0.5110 (10)0.109 (4)0.75
O21'0.4627 (6)0.7506 (17)0.4184 (18)0.052 (4)0.25
C21'0.5054 (9)0.7583 (16)0.498 (2)0.023 (4)0.25
N310.71251 (14)0.7443 (3)0.6873 (3)0.0218 (7)
C310.7539 (3)0.7288 (7)0.7698 (8)0.0250 (15)0.70
O310.7962 (3)0.7135 (8)0.8513 (7)0.074 (3)0.70
C31'0.7530 (9)0.7621 (19)0.734 (2)0.030 (6)*0.30
O31'0.8018 (11)0.771 (2)0.789 (3)0.098 (8)*0.30
U11U22U33U12U13U23
Co10.0272 (3)0.0060 (2)0.0076 (2)−0.00033 (18)0.00627 (18)0.00004 (16)
N10.0307 (18)0.0095 (13)0.0085 (13)−0.0035 (11)0.0050 (13)0.0015 (10)
C10.037 (2)0.0124 (16)0.0150 (16)−0.0096 (15)0.0022 (16)0.0021 (13)
C20.037 (2)0.0160 (17)0.0103 (15)−0.0053 (15)−0.0003 (16)0.0024 (13)
N20.0319 (18)0.0090 (13)0.0093 (13)−0.0019 (11)0.0033 (13)0.0010 (10)
C30.039 (2)0.0161 (17)0.0119 (16)−0.0099 (15)0.0021 (16)0.0006 (13)
C40.036 (2)0.0161 (17)0.0110 (15)−0.0066 (15)−0.0009 (16)0.0028 (13)
N110.0312 (18)0.0083 (13)0.0119 (13)0.0028 (11)0.0100 (13)0.0027 (10)
C110.036 (2)0.0137 (17)0.0241 (18)0.0075 (15)0.0172 (17)0.0096 (14)
C120.036 (2)0.0147 (16)0.0220 (17)0.0080 (15)0.0182 (17)0.0087 (14)
N120.0331 (18)0.0079 (13)0.0129 (14)0.0033 (11)0.0126 (14)0.0015 (10)
C130.041 (2)0.0177 (18)0.0257 (19)0.0137 (16)0.0198 (19)0.0117 (15)
C140.039 (2)0.0179 (18)0.0278 (19)0.0093 (16)0.0216 (18)0.0111 (15)
N210.0311 (18)0.0192 (16)0.0204 (15)−0.0023 (14)0.0056 (16)−0.0001 (12)
C210.034 (4)0.032 (4)0.040 (4)0.000 (3)0.014 (3)−0.027 (3)
O210.041 (4)0.137 (8)0.152 (8)−0.033 (4)0.031 (5)−0.114 (7)
O21'0.027 (7)0.061 (11)0.055 (9)0.012 (7)−0.016 (8)−0.038 (8)
C21'0.040 (12)0.004 (8)0.023 (9)0.001 (7)0.003 (9)0.004 (6)
N310.0318 (18)0.0171 (16)0.0183 (15)0.0012 (13)0.0099 (15)−0.0002 (12)
C310.038 (4)0.018 (3)0.016 (3)0.007 (3)0.001 (3)−0.010 (3)
O310.052 (4)0.089 (5)0.055 (4)0.036 (4)−0.031 (4)−0.053 (4)
Co1—N212.039 (3)N11—C111.337 (5)
Co1—N312.059 (3)C11—C121.390 (5)
Co1—N112.191 (3)C11—H110.9500
Co1—N2i2.193 (3)C12—N121.333 (5)
Co1—N12ii2.197 (3)C12—H120.9500
Co1—N12.200 (3)N12—C131.332 (5)
N1—C11.324 (5)N12—Co1iv2.197 (3)
N1—C41.339 (5)C13—C141.397 (5)
C1—C21.394 (5)C13—H130.9500
C1—H10.9500C14—H140.9500
C2—N21.337 (5)N21—C211.151 (8)
C2—H20.9500N21—C21'1.18 (2)
N2—C31.338 (5)C21—O211.206 (9)
N2—Co1iii2.193 (3)O21'—C21'1.19 (3)
C3—C41.395 (5)N31—C31'1.04 (2)
C3—H30.9500N31—C311.182 (8)
C4—H40.9500C31—O311.195 (9)
N11—C141.334 (5)C31'—O31'1.24 (4)
N21—Co1—N31179.45 (13)N1—C4—H4119.2
N21—Co1—N1190.19 (12)C3—C4—H4119.2
N31—Co1—N1189.76 (12)C14—N11—C11116.8 (3)
N21—Co1—N2i90.23 (12)C14—N11—Co1121.8 (2)
N31—Co1—N2i89.23 (12)C11—N11—Co1121.2 (2)
N11—Co1—N2i90.53 (11)N11—C11—C12121.5 (3)
N21—Co1—N12ii90.19 (12)N11—C11—H11119.2
N31—Co1—N12ii90.35 (12)C12—C11—H11119.2
N11—Co1—N12ii89.45 (10)N12—C12—C11121.6 (3)
N2i—Co1—N12ii179.58 (12)N12—C12—H12119.2
N21—Co1—N190.57 (12)C11—C12—H12119.2
N31—Co1—N189.49 (12)C13—N12—C12117.1 (3)
N11—Co1—N1178.55 (11)C13—N12—Co1iv121.0 (2)
N2i—Co1—N190.70 (10)C12—N12—Co1iv121.9 (2)
N12ii—Co1—N189.32 (10)N12—C13—C14121.3 (3)
C1—N1—C4116.7 (3)N12—C13—H13119.3
C1—N1—Co1120.9 (2)C14—C13—H13119.3
C4—N1—Co1122.5 (2)N11—C14—C13121.6 (3)
N1—C1—C2122.1 (3)N11—C14—H14119.2
N1—C1—H1118.9C13—C14—H14119.2
C2—C1—H1118.9C21—N21—C21'34.7 (8)
N2—C2—C1121.5 (3)C21—N21—Co1153.4 (5)
N2—C2—H2119.3C21'—N21—Co1150.6 (11)
C1—C2—H2119.3N21—C21—O21177.2 (8)
C2—N2—C3116.5 (3)N21—C21'—O21'174 (2)
C2—N2—Co1iii120.1 (2)C31'—N31—C3124.8 (10)
C3—N2—Co1iii123.4 (2)C31'—N31—Co1163.3 (12)
N2—C3—C4121.6 (3)C31—N31—Co1150.1 (5)
N2—C3—H3119.2N31—C31—O31178.7 (10)
C4—C3—H3119.2N31—C31'—O31'174 (2)
N1—C4—C3121.6 (3)
Table 1

Selected geometric parameters (Å, °)

Co1—N212.039 (3)
Co1—N312.059 (3)
Co1—N112.191 (3)
Co1—N2i2.193 (3)
Co1—N12ii2.197 (3)
Co1—N12.200 (3)

Symmetry codes: (i) ; (ii) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Dimorphism of a new CuI coordination polymer:synthesis, crystal structures and properties of catena[CuI(2-iodopyrazine-N)] and poly[CuI(mu2-2-iodopyrazine-N,N')].

Authors:  Christian Näther; Mario Wriedt; Inke Jess
Journal:  Inorg Chem       Date:  2003-04-07       Impact factor: 5.165

  2 in total
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1.  Construction of Pyrazine-Appended 1D and 3D Cobalt(II) Succinate Coordination Polymers: Influence of Solvent on Architectures and Applications in Gas Adsorption and NAC Detection.

Authors:  Luann R D'souza; Nikita N Harmalkar; Sarvesh S Harmalkar; Sakharam B Tayade; Sunder N Dhuri
Journal:  ACS Omega       Date:  2022-02-10
  1 in total

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