Literature DB >> 21582346

{μ-6,6'-Dimeth-oxy-2,2'-[ethane-1,2-diyl-bis(nitrilo-methyl-idyne)]diphenolato-1κO,O,O,O:2κO,N,N',O}(methanol-1κO)(perchlorato-1κO)nickel(II)sodium.

Hui-Quan Xiao1.   

Abstract

The mol-ecule of the title compound, [NaNi(C(18)H(18)N(2)O(4))(ClO(4))(CH(3)OH)], is almost planar, the maximum deviation from the molecular plane being 5.3 (1) Å. The Ni(2+) ion is N(2)O(2) coordinated by the Schiff base ligand, leading to a slightly distorted square-planar environment. The Na atom is chelated by the four O atoms of the Schiff base ligand and is coordinated by the O atoms of a methanol ligand and a perchlorate anion. The perchlorate ion is disordered over two sites with occupancies 0.723 (12):0.277 (12).

Entities:  

Year:  2009        PMID: 21582346      PMCID: PMC2968922          DOI: 10.1107/S1600536809007776

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Schiff bases as ligands for metal ions and their roles in biochemical processes, see: Lindoy et al. (1976 ▶). For the steric, electronic and lipophilic properties of N,N-disalicylideneethyl­enediamine type Schiff bases ligands, see: Correia et al. (2005 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

[NaNi(C18H18N2O4)(n class="Chemical">ClO4)(CH4O)] M = 539.54 Monoclinic, a = 12.026 (2) Å b = 8.1360 (16) Å c = 23.394 (5) Å β = 104.302 (3)° V = 2218.0 (8) Å3 Z = 4 Mo Kα radiation μ = 1.07 mm−1 T = 273 K 0.14 × 0.12 × 0.11 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.865, T max = 0.892 10559 measured reflections 3906 independent reflections 3120 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.159 S = 1.06 3906 reflections 339 parameters H-atom parameters constrained Δρmax = 1.03 e Å−3 Δρmin = −1.14 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809007776/hg2479sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809007776/hg2479Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[NaNi(C18H18N2O4)(ClO4)(CH4O)]F(000) = 1111.9
Mr = 539.54Dx = 1.616 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3601 reflections
a = 12.026 (2) Åθ = 2.7–26.6°
b = 8.1360 (16) ŵ = 1.07 mm1
c = 23.394 (5) ÅT = 273 K
β = 104.302 (3)°Block, orange
V = 2218.0 (8) Å30.14 × 0.12 × 0.11 mm
Z = 4
Bruker SMART CCD area-detector diffractometer3906 independent reflections
Radiation source: fine-focus sealed tube3120 reflections with I > 2σ(I)
graphiteRint = 0.023
φ and ω scansθmax = 25.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −11→14
Tmin = 0.865, Tmax = 0.892k = −9→9
10559 measured reflectionsl = −27→27
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.159H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0852P)2 + 3.4175P] where P = (Fo2 + 2Fc2)/3
3906 reflections(Δ/σ)max = 0.001
339 parametersΔρmax = 1.03 e Å3
0 restraintsΔρmin = −1.14 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Ni10.17531 (4)0.91320 (6)1.01069 (2)0.0373 (2)
Na10.14961 (15)0.9105 (2)0.86470 (7)0.0501 (5)
Cl10.00049 (13)1.1323 (2)0.73545 (7)0.0721 (4)
O10.2467 (2)1.0034 (4)0.95724 (11)0.0448 (7)
O20.0756 (2)0.8289 (4)0.94440 (12)0.0447 (7)
O30.3169 (3)1.0958 (4)0.86647 (14)0.0576 (9)
O4−0.0318 (3)0.7296 (4)0.84088 (13)0.0557 (8)
O5−0.0995 (6)1.2219 (13)0.7369 (3)0.102 (3)0.723 (12)
O60.0663 (7)1.2518 (12)0.7120 (4)0.104 (3)0.723 (12)
O7−0.0350 (8)1.0008 (11)0.6966 (4)0.128 (4)0.723 (12)
O80.0599 (6)1.0976 (10)0.7922 (4)0.090 (3)0.723 (12)
O5'0.0360 (19)1.150 (3)0.6850 (10)0.102 (7)0.277 (12)
O6'−0.1060 (17)1.082 (3)0.7329 (9)0.098 (7)0.277 (12)
O7'0.0321 (18)1.264 (3)0.7734 (10)0.118 (9)0.277 (12)
O8'0.0764 (13)1.002 (2)0.7645 (8)0.076 (5)0.277 (12)
O90.2372 (3)0.6892 (5)0.83487 (16)0.0696 (10)
H9A0.29280.69820.82090.12 (3)*
N10.2807 (3)0.9918 (5)1.07592 (14)0.0457 (9)
N20.0964 (3)0.8305 (5)1.06239 (15)0.0458 (9)
C10.3996 (4)1.1441 (5)1.02507 (19)0.0441 (10)
C20.3391 (3)1.0965 (5)0.96838 (19)0.0398 (9)
C30.3795 (4)1.1522 (5)0.91995 (19)0.0435 (10)
C40.4748 (4)1.2522 (6)0.9279 (2)0.0552 (12)
H40.50031.28820.89560.066*
C50.5326 (4)1.2990 (6)0.9852 (2)0.0590 (12)
H50.59651.36720.99080.071*
C60.4969 (4)1.2463 (6)1.0322 (2)0.0560 (12)
H60.53681.27761.06990.067*
C70.3659 (4)1.0869 (6)1.0762 (2)0.0486 (11)
H70.40961.12161.11270.058*
C80.3589 (5)1.1308 (8)0.8156 (2)0.0695 (15)
H8A0.35471.24700.80820.104*
H8B0.31301.07380.78210.104*
H8C0.43721.09520.82250.104*
C9−0.0578 (4)0.6982 (5)0.99182 (19)0.0443 (10)
C10−0.0165 (3)0.7390 (5)0.94207 (18)0.0409 (9)
C11−0.0784 (4)0.6823 (6)0.8863 (2)0.0455 (10)
C12−0.1784 (4)0.5926 (6)0.8798 (2)0.0562 (12)
H12−0.21920.55780.84270.067*
C13−0.2176 (4)0.5547 (6)0.9300 (3)0.0593 (13)
H13−0.28440.49340.92600.071*
C14−0.1599 (4)0.6058 (6)0.9838 (2)0.0555 (13)
H14−0.18780.57981.01640.067*
C150.0024 (4)0.7488 (6)1.0494 (2)0.0506 (11)
H15−0.02940.72001.08040.061*
C16−0.0870 (5)0.6700 (9)0.7830 (2)0.0777 (17)
H16A−0.08880.55200.78340.117*
H16B−0.04510.70640.75530.117*
H16C−0.16400.71170.77150.117*
C170.2655 (5)0.9255 (7)1.1318 (2)0.0665 (15)
H17A0.28881.00661.16290.080*
H17B0.31260.82821.14280.080*
C180.1423 (5)0.8834 (7)1.1241 (2)0.0668 (15)
H18A0.13450.79551.15090.080*
H18B0.10030.97841.13260.080*
C190.2246 (7)0.5342 (9)0.8564 (4)0.106 (2)
H19A0.29470.50230.88380.159*
H19B0.20690.45720.82440.159*
H19C0.16340.53530.87610.159*
U11U22U33U12U13U23
Ni10.0411 (3)0.0449 (3)0.0281 (3)0.0071 (2)0.0126 (2)0.0040 (2)
Na10.0508 (10)0.0657 (12)0.0362 (9)0.0019 (8)0.0151 (7)0.0012 (8)
Cl10.0655 (9)0.0880 (11)0.0692 (9)0.0145 (8)0.0287 (7)0.0277 (8)
O10.0419 (16)0.0623 (19)0.0320 (14)−0.0024 (14)0.0123 (12)0.0025 (14)
O20.0444 (16)0.0592 (19)0.0349 (15)−0.0049 (14)0.0179 (12)0.0009 (13)
O30.0554 (19)0.080 (2)0.0412 (17)−0.0055 (17)0.0197 (15)0.0096 (16)
O40.0533 (18)0.071 (2)0.0439 (17)−0.0065 (16)0.0147 (14)−0.0040 (16)
O50.088 (5)0.121 (7)0.094 (5)0.030 (5)0.017 (4)−0.005 (5)
O60.101 (5)0.116 (7)0.101 (6)−0.012 (5)0.036 (5)0.032 (5)
O70.136 (7)0.116 (7)0.125 (7)0.020 (6)0.016 (6)−0.007 (6)
O80.081 (4)0.105 (7)0.077 (5)0.005 (4)0.008 (3)0.025 (4)
O5'0.097 (15)0.12 (2)0.091 (15)0.004 (14)0.027 (11)0.013 (13)
O6'0.087 (13)0.115 (18)0.090 (13)0.003 (12)0.020 (10)0.012 (12)
O7'0.112 (15)0.123 (18)0.112 (17)0.006 (13)0.015 (12)0.003 (14)
O8'0.072 (9)0.088 (12)0.067 (10)0.006 (9)0.015 (8)0.010 (9)
O90.067 (2)0.082 (3)0.064 (2)0.010 (2)0.0246 (19)−0.003 (2)
N10.051 (2)0.055 (2)0.0295 (17)0.0113 (18)0.0066 (15)0.0046 (16)
N20.061 (2)0.048 (2)0.0331 (18)0.0052 (18)0.0199 (16)0.0049 (16)
C10.044 (2)0.044 (2)0.043 (2)0.0100 (19)0.0077 (18)0.0011 (19)
C20.036 (2)0.040 (2)0.043 (2)0.0075 (17)0.0101 (17)0.0023 (18)
C30.042 (2)0.045 (2)0.044 (2)0.0079 (19)0.0119 (18)0.0065 (19)
C40.052 (3)0.047 (3)0.072 (3)0.004 (2)0.024 (2)0.013 (2)
C50.053 (3)0.048 (3)0.075 (3)−0.006 (2)0.013 (2)0.000 (2)
C60.055 (3)0.049 (3)0.059 (3)−0.003 (2)0.005 (2)−0.008 (2)
C70.050 (3)0.054 (3)0.037 (2)0.007 (2)0.0025 (19)−0.0044 (19)
C80.075 (4)0.093 (4)0.049 (3)−0.007 (3)0.032 (3)0.012 (3)
C90.046 (2)0.045 (2)0.048 (2)0.0090 (19)0.0224 (19)0.0110 (19)
C100.039 (2)0.042 (2)0.046 (2)0.0068 (18)0.0190 (18)0.0045 (19)
C110.039 (2)0.051 (3)0.049 (2)0.0013 (19)0.0151 (19)0.002 (2)
C120.048 (3)0.057 (3)0.063 (3)0.001 (2)0.013 (2)0.000 (2)
C130.045 (3)0.061 (3)0.078 (4)−0.006 (2)0.027 (3)0.006 (3)
C140.051 (3)0.056 (3)0.069 (3)0.007 (2)0.034 (3)0.014 (2)
C150.061 (3)0.054 (3)0.047 (3)0.010 (2)0.034 (2)0.012 (2)
C160.080 (4)0.106 (5)0.046 (3)−0.023 (3)0.013 (3)−0.016 (3)
C170.077 (4)0.090 (4)0.031 (2)0.002 (3)0.010 (2)0.010 (2)
C180.092 (4)0.076 (4)0.038 (3)−0.001 (3)0.028 (3)0.003 (2)
C190.114 (6)0.092 (5)0.117 (6)0.042 (5)0.038 (5)0.034 (5)
Ni1—O11.836 (3)C1—C71.432 (6)
Ni1—N21.840 (4)C2—C31.414 (6)
Ni1—N11.841 (4)C3—C41.380 (6)
Ni1—O21.843 (3)C4—C51.402 (7)
Ni1—Na13.3525 (19)C4—H40.9300
Na1—O92.281 (4)C5—C61.346 (7)
Na1—O12.318 (3)C5—H50.9300
Na1—O82.335 (7)C6—H60.9300
Na1—O22.351 (3)C7—H70.9300
Na1—O8'2.408 (16)C8—H8A0.9600
Na1—O32.506 (4)C8—H8B0.9600
Na1—O42.576 (4)C8—H8C0.9600
Cl1—O6'1.33 (2)C9—C141.412 (6)
Cl1—O5'1.36 (2)C9—C101.413 (6)
Cl1—O81.373 (7)C9—C151.423 (7)
Cl1—O7'1.39 (2)C10—C111.410 (6)
Cl1—O71.400 (9)C11—C121.383 (6)
Cl1—O51.414 (7)C12—C131.403 (7)
Cl1—O61.445 (8)C12—H120.9300
Cl1—O8'1.456 (17)C13—C141.343 (7)
O1—C21.315 (5)C13—H130.9300
O2—C101.317 (5)C14—H140.9300
O3—C31.370 (5)C15—H150.9300
O3—C81.432 (5)C16—H16A0.9600
O4—C111.374 (5)C16—H16B0.9600
O4—C161.437 (6)C16—H16C0.9600
O9—C191.380 (8)C17—C181.488 (8)
O9—H9A0.8174C17—H17A0.9700
N1—C71.283 (6)C17—H17B0.9700
N1—C171.468 (6)C18—H18A0.9700
N2—C151.281 (6)C18—H18B0.9700
N2—C181.477 (6)C19—H19A0.9600
C1—C21.401 (6)C19—H19B0.9600
C1—C61.411 (7)C19—H19C0.9600
O1—Ni1—N2176.62 (15)C19—O9—H9A113.8
O1—Ni1—N194.78 (15)Na1—O9—H9A122.5
N2—Ni1—N186.77 (17)C7—N1—C17119.5 (4)
O1—Ni1—O283.82 (12)C7—N1—Ni1126.8 (3)
N2—Ni1—O294.76 (15)C17—N1—Ni1113.5 (3)
N1—Ni1—O2177.16 (14)C15—N2—C18118.5 (4)
O1—Ni1—Na141.38 (9)C15—N2—Ni1127.0 (3)
N2—Ni1—Na1137.28 (13)C18—N2—Ni1114.0 (3)
N1—Ni1—Na1135.89 (12)C2—C1—C6119.8 (4)
O2—Ni1—Na142.52 (9)C2—C1—C7120.8 (4)
O9—Na1—O1112.26 (14)C6—C1—C7119.3 (4)
O9—Na1—O8117.3 (3)O1—C2—C1124.2 (4)
O1—Na1—O8120.1 (3)O1—C2—C3117.8 (4)
O9—Na1—O2108.27 (15)C1—C2—C3118.0 (4)
O1—Na1—O263.49 (11)O3—C3—C4124.9 (4)
O8—Na1—O2124.2 (2)O3—C3—C2113.8 (4)
O9—Na1—O8'91.8 (5)C4—C3—C2121.3 (4)
O1—Na1—O8'141.9 (5)C3—C4—C5119.3 (5)
O8—Na1—O8'25.9 (4)C3—C4—H4120.4
O2—Na1—O8'137.7 (4)C5—C4—H4120.4
O9—Na1—O392.89 (15)C6—C5—C4120.8 (5)
O1—Na1—O364.60 (11)C6—C5—H5119.6
O8—Na1—O381.1 (2)C4—C5—H5119.6
O2—Na1—O3128.05 (13)C5—C6—C1120.9 (5)
O8'—Na1—O386.0 (4)C5—C6—H6119.5
O9—Na1—O485.03 (14)C1—C6—H6119.5
O1—Na1—O4126.36 (12)N1—C7—C1125.6 (4)
O8—Na1—O490.0 (2)N1—C7—H7117.2
O2—Na1—O462.87 (11)C1—C7—H7117.2
O8'—Na1—O483.0 (4)O3—C8—H8A109.5
O3—Na1—O4168.75 (13)O3—C8—H8B109.5
O9—Na1—Ni1112.55 (11)H8A—C8—H8B109.5
O1—Na1—Ni131.57 (7)O3—C8—H8C109.5
O8—Na1—Ni1130.2 (3)H8A—C8—H8C109.5
O2—Na1—Ni131.98 (8)H8B—C8—H8C109.5
O8'—Na1—Ni1155.4 (5)C14—C9—C10119.1 (4)
O3—Na1—Ni196.18 (9)C14—C9—C15120.1 (4)
O4—Na1—Ni194.83 (8)C10—C9—C15120.8 (4)
O6'—Cl1—O5'120.0 (14)O2—C10—C11117.8 (4)
O6'—Cl1—O8104.1 (9)O2—C10—C9124.0 (4)
O5'—Cl1—O8131.5 (10)C11—C10—C9118.2 (4)
O6'—Cl1—O7'112.1 (14)O4—C11—C12124.9 (4)
O5'—Cl1—O7'112.2 (16)O4—C11—C10113.6 (4)
O8—Cl1—O7'62.9 (9)C12—C11—C10121.4 (4)
O6'—Cl1—O766.4 (11)C11—C12—C13119.1 (5)
O5'—Cl1—O768.2 (13)C11—C12—H12120.4
O8—Cl1—O7118.2 (5)C13—C12—H12120.4
O7'—Cl1—O7178.2 (9)C14—C13—C12120.8 (5)
O6'—Cl1—O549.2 (9)C14—C13—H13119.6
O5'—Cl1—O5114.6 (10)C12—C13—H13119.6
O8—Cl1—O5109.0 (5)C13—C14—C9121.4 (4)
O7'—Cl1—O571.7 (9)C13—C14—H14119.3
O7—Cl1—O5106.6 (5)C9—C14—H14119.3
O6'—Cl1—O6143.3 (10)N2—C15—C9125.9 (4)
O5'—Cl1—O643.8 (10)N2—C15—H15117.0
O8—Cl1—O6107.6 (5)C9—C15—H15117.0
O7'—Cl1—O668.4 (10)O4—C16—H16A109.5
O7—Cl1—O6112.1 (6)O4—C16—H16B109.5
O5—Cl1—O6102.1 (6)H16A—C16—H16B109.5
O6'—Cl1—O8'106.3 (12)O4—C16—H16C109.5
O5'—Cl1—O8'100.9 (12)H16A—C16—H16C109.5
O8—Cl1—O8'44.1 (7)H16B—C16—H16C109.5
O7'—Cl1—O8'103.1 (12)N1—C17—C18108.5 (4)
O7—Cl1—O8'78.5 (9)N1—C17—H17A110.0
O5—Cl1—O8'143.6 (7)C18—C17—H17A110.0
O6—Cl1—O8'109.3 (7)N1—C17—H17B110.0
C2—O1—Ni1127.5 (3)C18—C17—H17B110.0
C2—O1—Na1125.4 (3)H17A—C17—H17B108.4
Ni1—O1—Na1107.04 (14)N2—C18—C17107.8 (4)
C10—O2—Ni1127.4 (3)N2—C18—H18A110.1
C10—O2—Na1127.1 (3)C17—C18—H18A110.1
Ni1—O2—Na1105.50 (13)N2—C18—H18B110.1
C3—O3—C8117.7 (4)C17—C18—H18B110.1
C3—O3—Na1118.3 (3)H18A—C18—H18B108.5
C8—O3—Na1123.6 (3)O9—C19—H19A109.5
C11—O4—C16116.9 (4)O9—C19—H19B109.5
C11—O4—Na1118.6 (3)H19A—C19—H19B109.5
C16—O4—Na1124.5 (3)O9—C19—H19C109.5
Cl1—O8—Na1150.8 (6)H19A—C19—H19C109.5
Cl1—O8'—Na1135.7 (13)H19B—C19—H19C109.5
C19—O9—Na1120.6 (4)
  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  Crystal structure of {μ-6,6'-dimeth-oxy-2,2'-[ethane-1,2-diylbis(nitrilo-methanylyl-idene)]diphenolato}(meth-anol)(nitrato)nickel(II)sodium.

Authors:  Olesia V Moroz; Viktor A Trush; Tatiana Yu Sliva; Irina S Konovalova; Vladimir M Amirkhanov
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-10-08
  1 in total

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