Literature DB >> 21582328

catena-Poly[[diaquacobalt(II)]-bis(μ-3-carboxy-adamantane-1-carboxyl-ato-κO:O)].

Li-Ming Tang1, Jia-Hui Xu, Xiao-Yan Han, Wei Xu.   

Abstract

In the title compound, [Co(C(12)H(15)O(4))(2)(H(2)O)(2)](n), adjacent Co(II) atoms ( symmetry) are bridged by 3-carboxy-adamantane-1-carboxyl-ate anions, forming a chain running along [001]. Inter-chain O-H⋯O hydrogen bonds link the chains into layers parallel to (100); the layers are further connected via inter-layer hydrogen bonds inter-actions, forming a three-dimensional framework.

Entities:  

Year:  2009        PMID: 21582328      PMCID: PMC2968899          DOI: 10.1107/S1600536809007387

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related compounds, see: Nielsen et al. (2008 ▶); Zhao et al. (2007 ▶); Zheng et al. (2008 ▶).

Experimental

Crystal data

[Co(C12H15O4)2(H2O)2] M = 541.44 Orthorhombic, a = 10.718 (2) Å b = 23.638 (5) Å c = 9.0726 (18) Å V = 2298.6 (8) Å3 Z = 4 Mo Kα radiation μ = 0.81 mm−1 T = 293 K 0.10 × 0.10 × 0.10 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.921, T max = 0.925 20865 measured reflections 2622 independent reflections 2145 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.086 S = 1.06 2622 reflections 161 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.30 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks ptcLa, I. DOI: 10.1107/S1600536809007387/ng2552sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809007387/ng2552Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C12H15O4)2(H2O)2]F(000) = 1140
Mr = 541.44Dx = 1.565 Mg m3
Orthorhombic, PccnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ab 2acCell parameters from 20865 reflections
a = 10.718 (2) Åθ = 3.1–27.5°
b = 23.638 (5) ŵ = 0.81 mm1
c = 9.0726 (18) ÅT = 293 K
V = 2298.6 (8) Å3Block, purple
Z = 40.10 × 0.10 × 0.10 mm
Rigaku R-AXIS RAPID diffractometer2622 independent reflections
Radiation source: fine-focus sealed tube2145 reflections with I > 2σ(I)
graphiteRint = 0.033
Detector resolution: 0 pixels mm-1θmax = 27.5°, θmin = 3.1°
ω scansh = −13→13
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −30→30
Tmin = 0.921, Tmax = 0.925l = −11→11
20865 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.086H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0444P)2 + 0.9177P] where P = (Fo2 + 2Fc2)/3
2622 reflections(Δ/σ)max = 0.001
161 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co0.50000.50000.00000.02148 (11)
C10.50924 (15)0.62852 (7)0.64285 (18)0.0239 (3)
C20.37038 (16)0.64210 (7)0.61757 (18)0.0300 (4)
H2A0.32130.60770.62460.036*
H2B0.34130.66830.69240.036*
C30.35442 (17)0.66835 (9)0.46523 (19)0.0343 (4)
H3A0.26600.67700.44900.041*
C40.39899 (16)0.62682 (8)0.34654 (18)0.0310 (4)
H4A0.34970.59240.35110.037*
H4B0.38780.64350.24980.037*
C50.53696 (15)0.61264 (7)0.37055 (16)0.0212 (3)
C60.55413 (17)0.58683 (7)0.52439 (16)0.0256 (3)
H6A0.64150.57800.54030.031*
H6B0.50690.55190.53150.031*
C70.4296 (2)0.72253 (8)0.4553 (2)0.0394 (5)
H7A0.40120.74900.52970.047*
H7B0.41760.73980.35930.047*
C80.56719 (19)0.70952 (7)0.47855 (19)0.0327 (4)
H8A0.61550.74460.47180.039*
C90.58580 (17)0.68311 (7)0.63123 (18)0.0295 (4)
H9A0.55940.70960.70680.035*
H9B0.67350.67480.64650.035*
C100.61268 (16)0.66778 (7)0.36080 (18)0.0278 (4)
H10A0.70050.65970.37580.033*
H10B0.60280.68440.26370.033*
C110.58484 (15)0.57136 (7)0.25371 (16)0.0247 (3)
O10.52461 (12)0.56998 (5)0.13165 (12)0.0296 (3)
O20.67854 (12)0.54217 (6)0.27703 (13)0.0378 (3)
C120.51789 (16)0.60130 (7)0.79318 (18)0.0280 (4)
O30.51926 (19)0.63717 (6)0.90404 (15)0.0615 (5)
H10.51540.62090.98230.074*
O40.51779 (12)0.55044 (5)0.80980 (13)0.0312 (3)
O50.69310 (12)0.48644 (6)0.00823 (12)0.0314 (3)
H20.71970.50190.08070.038*
H30.73330.5010−0.05750.038*
U11U22U33U12U13U23
Co0.02775 (18)0.02296 (17)0.01371 (17)0.00182 (11)0.00009 (11)0.00032 (11)
C10.0317 (9)0.0242 (7)0.0158 (7)0.0027 (6)0.0009 (6)0.0004 (6)
C20.0277 (9)0.0389 (9)0.0232 (8)−0.0011 (7)0.0058 (7)−0.0017 (7)
C30.0239 (9)0.0516 (11)0.0274 (8)0.0131 (8)−0.0004 (7)0.0010 (8)
C40.0250 (9)0.0467 (10)0.0213 (8)0.0020 (7)−0.0039 (6)−0.0009 (7)
C50.0233 (7)0.0267 (7)0.0137 (6)0.0007 (6)−0.0009 (6)−0.0011 (6)
C60.0361 (9)0.0243 (7)0.0164 (7)0.0041 (7)0.0003 (6)−0.0009 (6)
C70.0554 (13)0.0336 (9)0.0292 (9)0.0186 (9)0.0036 (9)0.0067 (8)
C80.0438 (11)0.0246 (8)0.0296 (9)−0.0059 (7)0.0065 (8)0.0010 (7)
C90.0349 (9)0.0297 (8)0.0239 (8)−0.0043 (7)−0.0014 (7)−0.0066 (7)
C100.0303 (9)0.0308 (8)0.0222 (8)−0.0032 (7)0.0047 (6)0.0028 (7)
C110.0298 (8)0.0283 (7)0.0160 (7)−0.0005 (6)0.0006 (6)0.0003 (6)
O10.0444 (7)0.0296 (6)0.0148 (5)0.0054 (5)−0.0070 (5)−0.0027 (5)
O20.0362 (7)0.0532 (8)0.0239 (6)0.0179 (6)−0.0045 (5)−0.0106 (6)
C120.0373 (10)0.0288 (8)0.0181 (8)0.0048 (7)0.0004 (6)−0.0005 (7)
O30.1393 (17)0.0298 (7)0.0155 (6)0.0092 (8)−0.0021 (7)−0.0003 (6)
O40.0484 (8)0.0268 (6)0.0185 (6)−0.0005 (5)0.0019 (5)0.0024 (5)
O50.0289 (7)0.0377 (6)0.0274 (6)0.0007 (5)0.0016 (5)−0.0031 (5)
Co—O1i2.0574 (12)C5—C101.538 (2)
Co—O12.0574 (12)C6—H6A0.9700
Co—O52.0956 (14)C6—H6B0.9700
Co—O5i2.0956 (14)C7—C81.522 (3)
Co—O4ii2.1061 (12)C7—H7A0.9700
Co—O4iii2.1061 (12)C7—H7B0.9700
C1—C121.511 (2)C8—C91.532 (2)
C1—C91.533 (2)C8—C101.534 (2)
C1—C61.535 (2)C8—H8A0.9800
C1—C21.540 (2)C9—H9A0.9700
C2—C31.525 (2)C9—H9B0.9700
C2—H2A0.9700C10—H10A0.9700
C2—H2B0.9700C10—H10B0.9700
C3—C71.516 (3)C11—O21.237 (2)
C3—C41.533 (2)C11—O11.2823 (19)
C3—H3A0.9800C12—O41.212 (2)
C4—C51.532 (2)C12—O31.316 (2)
C4—H4A0.9700O3—H10.8083
C4—H4B0.9700O4—Coiv2.1061 (12)
C5—C111.530 (2)O5—H20.8045
C5—C61.534 (2)O5—H30.8128
O1i—Co—O1180.00 (6)C6—C5—C10109.03 (13)
O1i—Co—O591.39 (5)C5—C6—C1110.11 (13)
O1—Co—O588.61 (5)C5—C6—H6A109.6
O1i—Co—O5i88.61 (5)C1—C6—H6A109.6
O1—Co—O5i91.39 (5)C5—C6—H6B109.6
O5—Co—O5i180.00 (6)C1—C6—H6B109.6
O1i—Co—O4ii90.51 (5)H6A—C6—H6B108.2
O1—Co—O4ii89.49 (5)C3—C7—C8109.63 (14)
O5—Co—O4ii88.49 (5)C3—C7—H7A109.7
O5i—Co—O4ii91.51 (5)C8—C7—H7A109.7
O1i—Co—O4iii89.49 (5)C3—C7—H7B109.7
O1—Co—O4iii90.51 (5)C8—C7—H7B109.7
O5—Co—O4iii91.51 (5)H7A—C7—H7B108.2
O5i—Co—O4iii88.49 (5)C7—C8—C9109.50 (15)
O4ii—Co—O4iii180.00 (5)C7—C8—C10109.98 (15)
C12—C1—C9112.81 (14)C9—C8—C10109.04 (14)
C12—C1—C6109.83 (13)C7—C8—H8A109.4
C9—C1—C6108.93 (14)C9—C8—H8A109.4
C12—C1—C2106.41 (13)C10—C8—H8A109.4
C9—C1—C2109.37 (14)C8—C9—C1109.59 (13)
C6—C1—C2109.42 (14)C8—C9—H9A109.8
C3—C2—C1109.17 (13)C1—C9—H9A109.8
C3—C2—H2A109.8C8—C9—H9B109.8
C1—C2—H2A109.8C1—C9—H9B109.8
C3—C2—H2B109.8H9A—C9—H9B108.2
C1—C2—H2B109.8C8—C10—C5109.71 (13)
H2A—C2—H2B108.3C8—C10—H10A109.7
C7—C3—C2109.76 (15)C5—C10—H10A109.7
C7—C3—C4109.50 (15)C8—C10—H10B109.7
C2—C3—C4109.95 (15)C5—C10—H10B109.7
C7—C3—H3A109.2H10A—C10—H10B108.2
C2—C3—H3A109.2O2—C11—O1122.85 (15)
C4—C3—H3A109.2O2—C11—C5120.66 (14)
C5—C4—C3109.93 (13)O1—C11—C5116.47 (14)
C5—C4—H4A109.7C11—O1—Co125.90 (11)
C3—C4—H4A109.7O4—C12—O3122.98 (16)
C5—C4—H4B109.7O4—C12—C1122.33 (15)
C3—C4—H4B109.7O3—C12—C1114.61 (15)
H4A—C4—H4B108.2C12—O3—H1111.4
C11—C5—C4111.41 (13)C12—O4—Coiv131.58 (11)
C11—C5—C6109.66 (13)Co—O5—H2108.0
C4—C5—C6109.40 (13)Co—O5—H3115.6
C11—C5—C10108.90 (13)H2—O5—H3102.6
C4—C5—C10108.42 (13)
D—H···AD—HH···AD···AD—H···A
O3—H1···O1iv0.811.822.6058 (19)166
O5—H2···O20.802.072.7762 (18)147
O5—H3···O2v0.812.022.8334 (18)175
Table 1

Selected bond lengths (Å)

Co—O12.0574 (12)
Co—O52.0956 (14)
Co—O4i2.1061 (12)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H1⋯O1ii0.811.822.6058 (19)166
O5—H2⋯O20.802.072.7762 (18)147
O5—H3⋯O2iii0.812.022.8334 (18)175

Symmetry codes: (ii) ; (iii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A family of new glutarate compounds: synthesis, crystal structures of: Co(H2O)5L(1), Na2[CoL2] (2), Na2[L(H2L)4/2] (3), {[Co3(H2O)6L2](HL)2}.4H2O (4), {[Co3(H2O)6L2](HL)2}.10H2O (5), {[Co3(H2O)6L2]L2/2}.4H2O (6), and Na2{[Co3(H2O)2]L8/2].6H2O (7), and magnetic properties of 1 and 2 with H2L = HOOC-(CH2)3-COOH.

Authors:  Yue-Qing Zheng; Jian-Li Lin; Wei Xu; Hong-Zhen Xie; Jie Sun; Xian-Wen Wang
Journal:  Inorg Chem       Date:  2008-10-18       Impact factor: 5.165

  2 in total

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