Literature DB >> 21582325

Poly[[[diaqua-cobalt(II)]-bis-[μ-1,1'-(butane-1,4-di-yl)diimidazole-κN:N]] dichloride tetra-hydrate].

Yu Su1, Yan-Jun Hou, Zhi-Zhong Sun, Guang-Feng Hou, Jin-Sheng Gao.   

Abstract

In the title compound, {[Co(C(10)H(14)N(4))(2)(H(2)O)(2)]Cl(2)·4H(2)O}(n), the Co(II) atom and the mid-point of the 1,1'-butane-1,4-diyl-diimidazole ligands lie on inversion centers. The Co(II) atom is six-coordinated in a slightly distorted octa-hedral environment by four N atoms from four different ligands and by two O atoms from the water mol-ecules. The Co(II) atoms are bridged by the ligands into a (4,4) net. Adjacent nets are linked to the chloride anions and uncoordinated water mol-ecules via O-H⋯Cl and O-H⋯O hydrogen bonds, generating a three-dimensional supra-molecular structure.

Entities:  

Year:  2009        PMID: 21582325      PMCID: PMC2968895          DOI: 10.1107/S1600536809007478

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of 1,1′-butane-1,4-diyldiimidazole, see: Ma et al.(2003 ▶); Yu et al. (2008 ▶). For a related Co complex, see: Dong & Zhang (2006 ▶).

Experimental

Crystal data

[Co(C10H14N4)2(H2O)2]Cl2·4H2O M = 618.43 Triclinic, a = 7.969 (6) Å b = 9.979 (6) Å c = 10.259 (7) Å α = 114.97 (2)° β = 90.83 (3)° γ = 93.70 (3)° V = 737.3 (8) Å3 Z = 1 Mo Kα radiation μ = 0.81 mm−1 T = 291 K 0.44 × 0.37 × 0.22 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.718, T max = 0.842 7288 measured reflections 3348 independent reflections 3018 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.084 S = 1.14 3348 reflections 169 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.23 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809007478/ng2551sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809007478/ng2551Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C10H14N4)2(H2O)2]Cl2·4H2OZ = 1
Mr = 618.43F(000) = 325
Triclinic, P1Dx = 1.393 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.969 (6) ÅCell parameters from 6505 reflections
b = 9.979 (6) Åθ = 3.3–27.5°
c = 10.259 (7) ŵ = 0.81 mm1
α = 114.97 (2)°T = 291 K
β = 90.83 (3)°Block, red
γ = 93.70 (3)°0.44 × 0.37 × 0.22 mm
V = 737.3 (8) Å3
Rigaku R-AXIS RAPID diffractometer3348 independent reflections
Radiation source: fine-focus sealed tube3018 reflections with I > 2σ(I)
graphiteRint = 0.017
ω scanθmax = 27.5°, θmin = 3.3°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −10→10
Tmin = 0.718, Tmax = 0.842k = −12→12
7288 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.084H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0444P)2 + 0.1566P] where P = (Fo2 + 2Fc2)/3
3348 reflections(Δ/σ)max < 0.001
169 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.6521 (2)0.1455 (2)0.94674 (17)0.0354 (4)
H10.66950.21571.04160.043*
C20.5873 (2)0.16729 (19)0.83506 (17)0.0330 (3)
H20.55160.25650.84090.040*
C30.64306 (19)−0.06103 (17)0.75067 (16)0.0283 (3)
H30.6543−0.15960.68850.034*
C40.7646 (2)−0.0765 (2)0.9698 (2)0.0382 (4)
H40.7167−0.17830.93120.046*
H50.7386−0.02881.07050.046*
C50.9543 (2)−0.07561 (17)0.95821 (18)0.0335 (3)
H60.9958−0.14430.99310.040*
H70.9803−0.11070.85760.040*
C60.2259 (2)0.22255 (18)0.64249 (18)0.0331 (3)
H80.28730.29930.63140.040*
C70.1451 (2)0.00888 (18)0.63070 (18)0.0325 (3)
H90.1409−0.09160.60930.039*
C80.0303 (2)0.10224 (18)0.70471 (18)0.0344 (4)
H10−0.06580.07840.74320.041*
C90.0058 (2)0.3775 (2)0.7958 (2)0.0406 (4)
H11−0.11510.36290.77600.049*
H120.04950.45290.76630.049*
C100.0423 (3)0.43001 (19)0.9552 (2)0.0438 (4)
H130.16300.44870.97510.053*
H140.00380.35220.98320.053*
Cl10.74821 (7)0.35621 (5)0.32791 (5)0.04818 (14)
Co10.50000.00000.50000.02144 (9)
N10.58238 (16)0.03688 (14)0.71136 (13)0.0274 (3)
N20.68668 (16)−0.00004 (15)0.89242 (14)0.0299 (3)
N30.26947 (15)0.08534 (14)0.59164 (13)0.0265 (3)
N40.08195 (17)0.23842 (15)0.71246 (15)0.0312 (3)
O10.59361 (16)0.22377 (12)0.53595 (13)0.0381 (3)
H150.58270.30490.60890.057*
H160.62730.24290.46700.057*
O20.1615 (2)0.38041 (17)0.36469 (18)0.0668 (5)
H170.18120.44900.44890.100*
H180.05540.37000.34900.100*
O30.4231 (2)0.49280 (17)0.24618 (19)0.0670 (5)
H190.33780.45750.27340.100*
H200.51210.46390.26930.100*
U11U22U33U12U13U23
C10.0329 (8)0.0426 (9)0.0241 (7)0.0052 (7)0.0005 (6)0.0074 (7)
C20.0328 (8)0.0345 (8)0.0280 (7)0.0091 (6)0.0016 (6)0.0086 (7)
C30.0268 (7)0.0319 (8)0.0256 (7)0.0010 (6)−0.0018 (6)0.0120 (6)
C40.0357 (9)0.0503 (10)0.0395 (9)−0.0060 (7)−0.0089 (7)0.0314 (8)
C50.0354 (9)0.0321 (8)0.0369 (8)0.0016 (6)−0.0083 (7)0.0188 (7)
C60.0291 (8)0.0340 (8)0.0418 (9)0.0078 (6)0.0106 (7)0.0205 (7)
C70.0335 (8)0.0283 (8)0.0337 (8)0.0033 (6)0.0067 (6)0.0110 (7)
C80.0306 (8)0.0358 (8)0.0378 (8)0.0041 (6)0.0110 (7)0.0161 (7)
C90.0412 (10)0.0369 (9)0.0508 (10)0.0190 (7)0.0179 (8)0.0228 (8)
C100.0513 (11)0.0324 (9)0.0497 (11)0.0197 (8)0.0149 (9)0.0166 (8)
Cl10.0565 (3)0.0506 (3)0.0353 (2)−0.0058 (2)0.0008 (2)0.0175 (2)
Co10.02117 (15)0.02402 (15)0.01902 (14)0.00459 (10)0.00162 (10)0.00862 (11)
N10.0255 (6)0.0329 (7)0.0226 (6)0.0051 (5)0.0004 (5)0.0104 (5)
N20.0247 (6)0.0420 (7)0.0260 (6)0.0001 (5)−0.0020 (5)0.0179 (6)
N30.0235 (6)0.0316 (6)0.0256 (6)0.0061 (5)0.0038 (5)0.0127 (5)
N40.0290 (7)0.0328 (7)0.0353 (7)0.0105 (5)0.0103 (5)0.0166 (6)
O10.0505 (8)0.0261 (6)0.0355 (6)0.0007 (5)0.0115 (5)0.0110 (5)
O20.0597 (10)0.0521 (9)0.0657 (10)0.0088 (7)−0.0033 (8)0.0025 (8)
O30.0763 (12)0.0472 (9)0.0683 (10)0.0111 (8)0.0051 (9)0.0147 (8)
C1—C21.354 (3)C8—N41.363 (2)
C1—N21.367 (2)C8—H100.9300
C1—H10.9300C9—N41.466 (2)
C2—N11.380 (2)C9—C101.508 (3)
C2—H20.9300C9—H110.9700
C3—N11.319 (2)C9—H120.9700
C3—N21.348 (2)C10—C10ii1.518 (3)
C3—H30.9300C10—H130.9700
C4—N21.468 (2)C10—H140.9700
C4—C51.518 (3)Co1—N1iii2.1265 (18)
C4—H40.9700Co1—N12.1265 (18)
C4—H50.9700Co1—N32.1355 (18)
C5—C5i1.513 (3)Co1—N3iii2.1355 (18)
C5—H60.9700Co1—O12.1819 (17)
C5—H70.9700Co1—O1iii2.1819 (17)
C6—N31.316 (2)O1—H150.8500
C6—N41.345 (2)O1—H160.8501
C6—H80.9300O2—H170.8501
C7—C81.347 (2)O2—H180.8499
C7—N31.378 (2)O3—H190.8500
C7—H90.9300O3—H200.8501
C2—C1—N2106.40 (14)C9—C10—H13109.1
C2—C1—H1126.8C10ii—C10—H13109.1
N2—C1—H1126.8C9—C10—H14109.1
C1—C2—N1109.55 (16)C10ii—C10—H14109.1
C1—C2—H2125.2H13—C10—H14107.8
N1—C2—H2125.2N1iii—Co1—N1180.0
N1—C3—N2111.34 (14)N1iii—Co1—N393.49 (6)
N1—C3—H3124.3N1—Co1—N386.51 (6)
N2—C3—H3124.3N1iii—Co1—N3iii86.51 (6)
N2—C4—C5112.55 (14)N1—Co1—N3iii93.49 (6)
N2—C4—H4109.1N3—Co1—N3iii180.0
C5—C4—H4109.1N1iii—Co1—O188.40 (6)
N2—C4—H5109.1N1—Co1—O191.60 (6)
C5—C4—H5109.1N3—Co1—O188.99 (6)
H4—C4—H5107.8N3iii—Co1—O191.01 (6)
C5i—C5—C4113.60 (19)N1iii—Co1—O1iii91.60 (6)
C5i—C5—H6108.8N1—Co1—O1iii88.40 (6)
C4—C5—H6108.8N3—Co1—O1iii91.01 (6)
C5i—C5—H7108.8N3iii—Co1—O1iii88.99 (6)
C4—C5—H7108.8O1—Co1—O1iii180.0
H6—C5—H7107.7C3—N1—C2105.50 (14)
N3—C6—N4111.80 (15)C3—N1—Co1126.67 (11)
N3—C6—H8124.1C2—N1—Co1127.81 (12)
N4—C6—H8124.1C3—N2—C1107.20 (14)
C8—C7—N3109.45 (15)C3—N2—C4125.39 (15)
C8—C7—H9125.3C1—N2—C4127.34 (14)
N3—C7—H9125.3C6—N3—C7105.19 (14)
C7—C8—N4106.96 (15)C6—N3—Co1128.87 (11)
C7—C8—H10126.5C7—N3—Co1125.19 (11)
N4—C8—H10126.5C6—N4—C8106.59 (14)
N4—C9—C10111.41 (14)C6—N4—C9126.86 (15)
N4—C9—H11109.3C8—N4—C9126.17 (14)
C10—C9—H11109.3Co1—O1—H15128.5
N4—C9—H12109.3Co1—O1—H16121.2
C10—C9—H12109.3H15—O1—H16108.9
H11—C9—H12108.0H17—O2—H18106.8
C9—C10—C10ii112.6 (2)H19—O3—H20109.6
D—H···AD—HH···AD···AD—H···A
O1—H15···O3iv0.851.942.781 (2)169
O1—H16···Cl10.852.353.1728 (19)165
O2—H17···Cl1iv0.852.323.172 (2)176
O2—H18···Cl1v0.852.443.292 (3)175
O3—H19···O20.851.992.829 (3)171
O3—H20···Cl10.852.413.261 (3)174
Table 1

Selected geometric parameters (Å, °)

Co1—N12.1265 (18)
Co1—N32.1355 (18)
Co1—O12.1819 (17)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H15⋯O3ii0.851.942.781 (2)169
O1—H16⋯Cl10.852.353.1728 (19)165
O2—H17⋯Cl1ii0.852.323.172 (2)176
O2—H18⋯Cl1iii0.852.443.292 (3)175
O3—H19⋯O20.851.992.829 (3)171
O3—H20⋯Cl10.852.413.261 (3)174

Symmetry codes: (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  1,1'-(Butane-1,4-di-yl)diimidazole-3,3'-diium tetra-chloridozincate(II) dihydrate.

Authors:  Ying-Hui Yu; Ai-E Shi; Yu Su; Guang-Feng Hou; Jin-Sheng Gao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-04

3.  A porous supramolecular architecture from a copper(II) coordination polymer with a 3D four-connected 8(6) net.

Authors:  Jian-Fang Ma; Jin Yang; Guo-Li Zheng; Li Li; Jing-Fu Liu
Journal:  Inorg Chem       Date:  2003-11-17       Impact factor: 5.165

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.