Literature DB >> 21582314

Poly[(μ(2)-2-hydr-oxy-2-methyl-propionato-κO,O:O)(μ(2)-2-hydr-oxy-2-methyl-propionato-κO:κO)dioxido-uranium(VI)].

Takashi Yoshimura1, Hidetoshi Kikunaga, Atsushi Shinohara.   

Abstract

In the title compound, [UO(2)(C(4)H(7)O(3))(2)](n), the dioxouranium(VI) units are linked by 2-hydr-oxy-2-methyl-propionate ligands into a honeycomb structure. The U atom is seven-coordinate in a penta-gonal-bipyramidal geometry. The uncoordinated hydr-oxy groups of the 2-hydr-oxy-2-methyl-propionate ions inter-act with the O atom of the uranyl and with the coordinated hydr-oxy group of an adjacent 2-hydr-oxy-2-methyl-propionate ion through O-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21582314      PMCID: PMC2968812          DOI: 10.1107/S1600536809006059

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Back et al. (2007 ▶); Bombieri et al. (1973 ▶, 1974 ▶); Jiang et al. (2002 ▶); Thuéry (2006 ▶, 2007a ▶,b ▶,c ▶, 2008 ▶); Xie et al. (2003 ▶); Yokoyama et al. (1990 ▶).

Experimental

Crystal data

[U(C4H7O3)2O2] M = 476.22 Monoclinic, a = 9.009 (2) Å b = 8.237 (2) Å c = 17.552 (6) Å β = 98.246 (9)° V = 1289.0 (6) Å3 Z = 4 Mo Kα radiation μ = 12.62 mm−1 T = 200 K 0.20 × 0.11 × 0.03 mm

Data collection

Rigaku R-AXIS RAPID Imaging Plate diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.233, T max = 0.685 11887 measured reflections 2949 independent reflections 2547 reflections with I > 2σ(I) R int = 0.050

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.100 S = 0.86 2949 reflections 160 parameters H-atom parameters constrained Δρmax = 0.99 e Å−3 Δρmin = −2.15 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: TEXSAN (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: TEXSAN. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809006059/ng2546sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809006059/ng2546Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[U(C4H7O3)2O2]F(000) = 872.00
Mr = 476.22Dx = 2.454 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.7107 Å
Hall symbol: -P 2ynCell parameters from 8716 reflections
a = 9.009 (2) Åθ = 3.0–27.5°
b = 8.237 (2) ŵ = 12.62 mm1
c = 17.552 (6) ÅT = 200 K
β = 98.246 (9)°Platelet, yellow
V = 1289.0 (6) Å30.20 × 0.11 × 0.03 mm
Z = 4
Rigaku R-AXIS RAPID Imaging Plate diffractometer2949 independent reflections
Radiation source: fine-focus sealed tube2547 reflections with I > 2σ(I)
graphiteRint = 0.050
Detector resolution: 10.00 pixels mm-1θmax = 27.5°, θmin = 3.0°
ω scansh = 12→11
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −9→10
Tmin = 0.233, Tmax = 0.685l = −22→22
11887 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.029H-atom parameters constrained
wR(F2) = 0.100w = 1/[σ2(Fo2) + (0.079P)2 + 5.354P] where P = (Fo2 + 2Fc2)/3
S = 0.86(Δ/σ)max = 0.001
2949 reflectionsΔρmax = 0.99 e Å3
160 parametersΔρmin = −2.15 e Å3
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d's (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
U(1)0.63772 (2)0.19668 (3)0.62425 (1)0.0180 (1)
O(1)0.7538 (6)0.3101 (5)0.5695 (3)0.028 (1)
O(2)0.5188 (6)0.0891 (6)0.6778 (3)0.032 (1)
O(3)0.4753 (5)0.4342 (5)0.6250 (3)0.026 (1)
O(4)0.6920 (5)0.3869 (6)0.7286 (3)0.029 (1)
O(5)0.6435 (5)0.6018 (6)0.7991 (3)0.0252 (10)
O(6)0.2338 (5)0.4208 (5)0.5248 (3)0.0241 (10)
O(7)0.7009 (6)−0.0415 (6)0.5630 (3)0.034 (1)
O(8)0.4514 (6)0.1975 (5)0.5169 (3)0.030 (1)
C(1)0.6115 (7)0.5015 (8)0.7435 (3)0.022 (1)
C(2)0.4611 (7)0.5295 (8)0.6929 (4)0.021 (1)
C(3)0.3351 (8)0.463 (1)0.7324 (4)0.036 (2)
C(4)0.4392 (10)0.7064 (7)0.6704 (5)0.030 (2)
C(5)0.3241 (7)0.1601 (8)0.4820 (4)0.020 (1)
C(6)0.1889 (7)0.2626 (8)0.4949 (4)0.021 (1)
C(7)0.1191 (10)0.1790 (9)0.5588 (5)0.039 (2)
C(8)0.0781 (10)0.280 (1)0.4211 (5)0.038 (2)
H(1)0.32770.52530.77790.0356*
H(2)0.24230.46980.69800.0356*
H(3)0.35550.35160.74620.0356*
H(4)0.43880.77110.71590.0297*
H(5)0.34540.71920.63740.0297*
H(6)0.51960.74090.64380.0297*
H(7)0.03210.23840.56840.0386*
H(8)0.19080.17570.60480.0386*
H(9)0.09070.07030.54320.0386*
H(10)−0.01000.33590.43220.0383*
H(11)0.05070.17460.40070.0383*
H(12)0.12370.34130.38410.0383*
H(13)0.42100.47240.58780.0255*
H(14)0.21780.48830.49020.0241*
U11U22U33U12U13U23
U(1)0.0192 (2)0.0158 (2)0.0185 (2)0.00083 (8)0.0005 (1)−0.00114 (8)
O(1)0.022 (3)0.030 (3)0.032 (3)0.007 (2)0.004 (2)0.007 (2)
O(2)0.029 (3)0.025 (2)0.044 (3)0.005 (2)0.009 (2)0.007 (2)
O(3)0.034 (3)0.022 (2)0.017 (2)0.008 (2)−0.008 (2)−0.005 (2)
O(4)0.029 (3)0.025 (2)0.030 (2)0.007 (2)−0.004 (2)−0.006 (2)
O(5)0.028 (2)0.027 (2)0.020 (2)−0.008 (2)0.001 (2)−0.010 (2)
O(6)0.030 (2)0.016 (2)0.023 (2)0.002 (2)−0.005 (2)−0.001 (2)
O(7)0.032 (3)0.027 (3)0.038 (3)0.009 (2)−0.008 (2)−0.018 (2)
O(8)0.023 (3)0.033 (3)0.033 (3)0.005 (2)−0.002 (2)−0.008 (2)
C(1)0.023 (3)0.024 (3)0.017 (3)−0.007 (3)0.000 (2)−0.001 (3)
C(2)0.027 (3)0.016 (3)0.020 (3)0.000 (3)0.000 (2)−0.008 (2)
C(3)0.032 (4)0.042 (4)0.035 (4)−0.012 (3)0.009 (3)−0.013 (3)
C(4)0.040 (4)0.015 (3)0.032 (4)0.004 (3)−0.001 (3)−0.004 (3)
C(5)0.022 (3)0.019 (3)0.020 (3)0.009 (3)0.001 (2)0.002 (3)
C(6)0.021 (3)0.018 (3)0.022 (3)0.013 (3)−0.003 (2)0.003 (3)
C(7)0.035 (4)0.036 (4)0.048 (5)−0.015 (3)0.017 (4)−0.005 (3)
C(8)0.035 (4)0.035 (4)0.040 (4)0.014 (3)−0.012 (4)−0.004 (4)
U(1)—O(1)1.783 (5)C(2)—C(4)1.514 (9)
U(1)—O(2)1.762 (6)C(3)—H(1)0.960
U(1)—O(3)2.444 (5)C(3)—H(2)0.960
U(1)—O(4)2.407 (5)C(3)—H(3)0.960
U(1)—O(5)i2.355 (4)C(4)—H(4)0.960
U(1)—O(7)2.346 (5)C(4)—H(5)0.960
U(1)—O(8)2.336 (5)C(4)—H(6)0.960
O(3)—C(2)1.449 (8)C(5)—C(6)1.525 (10)
O(3)—H(13)0.820C(6)—C(7)1.53 (1)
O(4)—C(1)1.241 (8)C(6)—C(8)1.523 (10)
O(5)—C(1)1.280 (8)C(7)—H(7)0.960
O(6)—C(6)1.441 (8)C(7)—H(8)0.960
O(6)—H(14)0.820C(7)—H(9)0.960
O(7)—C(5)ii1.257 (8)C(8)—H(10)0.960
O(8)—C(5)1.259 (8)C(8)—H(11)0.960
C(1)—C(2)1.528 (8)C(8)—H(12)0.960
C(2)—C(3)1.51 (1)
O(1)—U(1)—O(2)178.3 (2)C(1)—C(2)—C(4)111.6 (6)
O(1)—U(1)—O(3)88.9 (2)C(3)—C(2)—C(4)112.9 (6)
O(1)—U(1)—O(4)89.9 (2)C(2)—C(3)—H(1)109.5
O(1)—U(1)—O(5)i88.5 (2)C(2)—C(3)—H(2)109.5
O(1)—U(1)—O(7)89.5 (2)C(2)—C(3)—H(3)109.5
O(1)—U(1)—O(8)88.5 (2)H(1)—C(3)—H(2)109.5
O(2)—U(1)—O(3)89.4 (2)H(1)—C(3)—H(3)109.5
O(2)—U(1)—O(4)89.7 (2)H(2)—C(3)—H(3)109.5
O(2)—U(1)—O(5)i93.0 (2)C(2)—C(4)—H(4)109.5
O(2)—U(1)—O(7)91.7 (2)C(2)—C(4)—H(5)109.5
O(2)—U(1)—O(8)90.6 (2)C(2)—C(4)—H(6)109.5
O(3)—U(1)—O(4)62.1 (1)H(4)—C(4)—H(5)109.5
O(3)—U(1)—O(5)i135.7 (2)H(4)—C(4)—H(6)109.5
O(3)—U(1)—O(7)148.9 (2)H(5)—C(4)—H(6)109.5
O(3)—U(1)—O(8)68.9 (2)O(7)ii—C(5)—O(8)124.4 (6)
O(4)—U(1)—O(5)i73.7 (2)O(7)ii—C(5)—C(6)116.7 (6)
O(4)—U(1)—O(7)149.0 (2)O(8)—C(5)—C(6)119.0 (6)
O(4)—U(1)—O(8)131.0 (2)O(6)—C(6)—C(5)111.4 (5)
O(5)i—U(1)—O(7)75.3 (2)O(6)—C(6)—C(7)105.3 (5)
O(5)i—U(1)—O(8)155.1 (2)O(6)—C(6)—C(8)109.8 (6)
O(7)—U(1)—O(8)80.0 (2)C(5)—C(6)—C(7)106.3 (6)
U(1)—O(3)—C(2)124.2 (3)C(5)—C(6)—C(8)111.5 (6)
U(1)—O(3)—H(13)126.3C(7)—C(6)—C(8)112.2 (6)
C(2)—O(3)—H(13)109.5C(6)—C(7)—H(7)109.5
U(1)—O(4)—C(1)126.5 (4)C(6)—C(7)—H(8)109.5
U(1)iii—O(5)—C(1)136.7 (4)C(6)—C(7)—H(9)109.5
C(6)—O(6)—H(14)109.5H(7)—C(7)—H(8)109.5
U(1)—O(7)—C(5)ii154.9 (4)H(7)—C(7)—H(9)109.5
U(1)—O(8)—C(5)153.0 (5)H(8)—C(7)—H(9)109.5
O(4)—C(1)—O(5)125.3 (6)C(6)—C(8)—H(10)109.5
O(4)—C(1)—C(2)119.3 (5)C(6)—C(8)—H(11)109.5
O(5)—C(1)—C(2)115.4 (6)C(6)—C(8)—H(12)109.5
O(3)—C(2)—C(1)102.7 (5)H(10)—C(8)—H(11)109.5
O(3)—C(2)—C(3)109.9 (5)H(10)—C(8)—H(12)109.5
O(3)—C(2)—C(4)109.3 (5)H(11)—C(8)—H(12)109.5
C(1)—C(2)—C(3)109.9 (5)
D—H···AD—HH···AD···AD—H···A
O(3)—H(13)···O(6)0.8201.9272.597 (6)138.188
O(6)—H(14)···O(1)iv0.8201.9992.777 (6)158.201
Table 1

Selected bond lengths (Å)

U1—O11.783 (5)
U1—O21.762 (6)
U1—O32.444 (5)
U1—O42.407 (5)
U1—O5i2.355 (4)
U1—O72.346 (5)
U1—O72.336 (5)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H13⋯O60.821.932.597 (6)138
O6—H14⋯O1ii0.822.002.777 (6)158

Symmetry code: (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and characterization of uranyl compounds with iminodiacetate and oxydiacetate displaying variable denticity.

Authors:  J Jiang; M J Sarsfield; J C Renshaw; F R Livens; D Collison; J M Charnock; M Helliwell; H Eccles
Journal:  Inorg Chem       Date:  2002-05-20       Impact factor: 5.165

3.  Uranyl ion complexation by citric and citramalic acids in the presence of diamines.

Authors:  Pierre Thuéry
Journal:  Inorg Chem       Date:  2007-02-13       Impact factor: 5.165

4.  Uranyl ion complexation by citric and tricarballylic acids: hydrothermal synthesis and structure of two- and three-dimensional uranium-organic frameworks.

Authors:  Pierre Thuéry
Journal:  Chem Commun (Camb)       Date:  2006-01-13       Impact factor: 6.222

  4 in total

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