Literature DB >> 21582242

N-tert-Butyl-5α-androstane-17β-carboxamide.

Xin Yan, Shiqing Xu, Jingmei Wang, Ying Chen, Peng Xia.   

Abstract

The title compound, C(24)H(41)NO, is a new derivative of the anti-HIV steroid 17β-(N-tert-butyl-amino-carbon-yl)androst-4-en-3-one. There are four rings in the structure and these are trans-fused. The three six-membered rings exhibit chair conformations, while the five-membered ring adopts an envelope conformation.

Entities:  

Year:  2009        PMID: 21582242      PMCID: PMC2968652          DOI: 10.1107/S1600536809005741

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the anti-HIV activity of 17β-(N-tert-butyl­amino­carbon­yl)-androst-4-en-3-one, see: Xia et al. (1999 ▶). For discussion of absolute configuration, see: Marker et al. (1940 ▶); Fieser & Fieser (1959 ▶); Throop & Tokes (1967 ▶); House (1972 ▶); Castro-Méndez et al. (2002 ▶).

Experimental

Crystal data

C24H41NO M = 359.58 Orthorhombic, a = 6.373 (2) Å b = 12.802 (4) Å c = 26.775 (9) Å V = 2184.3 (12) Å3 Z = 4 Mo Kα radiation μ = 0.07 mm−1 T = 294 K 0.15 × 0.08 × 0.06 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.990, T max = 0.996 10583 measured reflections 2757 independent reflections 1433 reflections with I > 2σ(I) R int = 0.063

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.068 S = 0.75 2757 reflections 240 parameters H-atom parameters constrained Δρmax = 0.10 e Å−3 Δρmin = −0.12 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809005741/tk2372sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005741/tk2372Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C24H41NODx = 1.093 Mg m3
Mr = 359.58Melting point: 451.5 K
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 962 reflections
a = 6.373 (2) Åθ = 2.8–19.0°
b = 12.802 (4) ŵ = 0.07 mm1
c = 26.775 (9) ÅT = 294 K
V = 2184.3 (12) Å3Parallelepiped, colourless
Z = 40.15 × 0.08 × 0.06 mm
F(000) = 800
Bruker SMART CCD area-detector diffractometer2757 independent reflections
Radiation source: sealed tube1433 reflections with I > 2σ(I)
graphiteRint = 0.063
φ and ω scansθmax = 27.1°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −8→8
Tmin = 0.990, Tmax = 0.996k = −16→16
10583 measured reflectionsl = −34→22
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.068H-atom parameters constrained
S = 0.75w = 1/[σ2(Fo2) + (0.0299P)2] where P = (Fo2 + 2Fc2)/3
2757 reflections(Δ/σ)max < 0.001
240 parametersΔρmax = 0.10 e Å3
0 restraintsΔρmin = −0.12 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.8035 (3)0.65842 (13)0.56653 (6)0.0540 (5)
H10.92470.68200.57510.065*
O10.4554 (3)0.67334 (13)0.58044 (5)0.0666 (5)
C11.1936 (4)0.62769 (17)0.84810 (7)0.0534 (6)
H1A1.21840.56670.82740.064*
H1B1.29160.68150.83770.064*
C21.2381 (4)0.59935 (18)0.90230 (7)0.0614 (7)
H2A1.15480.53880.91140.074*
H2B1.38490.58060.90570.074*
C31.1892 (4)0.6872 (2)0.93761 (8)0.0682 (7)
H3A1.29280.74200.93340.082*
H3B1.19930.66180.97170.082*
C40.9727 (4)0.73240 (19)0.92929 (7)0.0635 (7)
H4A0.95680.79490.94940.076*
H4B0.86810.68220.94020.076*
C50.9344 (4)0.75945 (17)0.87460 (7)0.0522 (6)
H51.04300.81060.86600.063*
C60.7298 (4)0.81485 (17)0.86688 (7)0.0610 (7)
H6A0.72390.87520.88870.073*
H6B0.61570.76850.87600.073*
C70.7000 (4)0.85044 (16)0.81299 (7)0.0614 (7)
H7A0.56010.87920.80910.074*
H7B0.80020.90530.80550.074*
C80.7295 (3)0.76086 (15)0.77615 (7)0.0426 (5)
H80.61960.70910.78260.051*
C90.9436 (3)0.70738 (15)0.78447 (6)0.0397 (5)
H91.04960.76210.78020.048*
C100.9693 (3)0.66681 (15)0.83881 (7)0.0400 (5)
C110.9900 (4)0.62511 (16)0.74440 (7)0.0508 (6)
H11A0.90220.56460.75050.061*
H11B1.13500.60310.74770.061*
C120.9537 (3)0.66238 (17)0.69070 (7)0.0499 (6)
H12A1.05650.71540.68230.060*
H12B0.97220.60420.66790.060*
C130.7344 (3)0.70711 (14)0.68449 (7)0.0382 (5)
C140.7092 (3)0.79588 (15)0.72231 (7)0.0436 (5)
H140.82500.84460.71620.052*
C150.5092 (4)0.85175 (17)0.70618 (7)0.0567 (6)
H15A0.51170.92450.71630.068*
H15B0.38630.81850.72050.068*
C160.5093 (4)0.84178 (16)0.64878 (7)0.0599 (7)
H16A0.53230.90950.63340.072*
H16B0.37600.81450.63720.072*
C170.6889 (4)0.76619 (14)0.63516 (6)0.0442 (6)
H170.81300.80770.62660.053*
C180.5691 (4)0.62057 (15)0.69106 (7)0.0539 (6)
H18A0.59900.56420.66850.081*
H18B0.43230.64830.68400.081*
H18C0.57300.59520.72480.081*
C190.8159 (4)0.57727 (15)0.84878 (8)0.0584 (7)
H19A0.85460.51780.82900.088*
H19B0.67640.59890.84010.088*
H19C0.82040.55890.88350.088*
C200.6366 (4)0.69668 (16)0.59120 (8)0.0487 (6)
C210.7988 (4)0.58025 (17)0.52642 (8)0.0598 (7)
C220.6959 (5)0.48089 (17)0.54580 (9)0.0912 (9)
H22A0.77370.45500.57390.137*
H22B0.69470.42920.51980.137*
H22C0.55450.49590.55590.137*
C231.0254 (5)0.5606 (2)0.51203 (10)0.1023 (10)
H23A1.08530.62360.49880.153*
H23B1.03140.50660.48720.153*
H23C1.10310.53920.54100.153*
C240.6785 (5)0.6221 (2)0.48153 (8)0.0816 (8)
H24A0.53530.63480.49080.122*
H24B0.68280.57170.45500.122*
H24C0.74150.68610.47050.122*
U11U22U33U12U13U23
N10.0549 (14)0.0628 (12)0.0443 (11)−0.0034 (11)0.0022 (10)−0.0105 (10)
O10.0572 (12)0.0831 (11)0.0595 (10)−0.0006 (11)−0.0099 (9)−0.0130 (9)
C10.0520 (16)0.0652 (14)0.0430 (13)0.0011 (13)−0.0016 (12)−0.0034 (11)
C20.0565 (18)0.0790 (15)0.0486 (14)0.0058 (14)−0.0050 (12)0.0054 (13)
C30.075 (2)0.0871 (18)0.0425 (14)0.0031 (17)−0.0089 (14)0.0036 (13)
C40.072 (2)0.0781 (17)0.0407 (14)0.0077 (16)0.0017 (13)−0.0055 (12)
C50.0539 (17)0.0644 (15)0.0382 (13)0.0022 (14)0.0015 (12)−0.0031 (11)
C60.069 (2)0.0696 (15)0.0443 (14)0.0139 (14)−0.0002 (12)−0.0153 (12)
C70.0739 (18)0.0619 (14)0.0483 (14)0.0217 (14)0.0024 (13)−0.0083 (12)
C80.0440 (15)0.0451 (12)0.0386 (12)0.0060 (11)0.0060 (10)−0.0030 (10)
C90.0386 (13)0.0454 (12)0.0351 (12)−0.0033 (11)0.0036 (10)−0.0027 (10)
C100.0367 (14)0.0471 (12)0.0363 (12)−0.0011 (11)0.0051 (10)0.0010 (10)
C110.0466 (15)0.0642 (14)0.0415 (12)0.0151 (12)−0.0001 (11)−0.0012 (11)
C120.0482 (15)0.0620 (14)0.0395 (12)0.0051 (13)0.0042 (11)−0.0075 (11)
C130.0392 (14)0.0419 (11)0.0336 (11)0.0017 (11)0.0008 (10)−0.0009 (10)
C140.0486 (15)0.0413 (11)0.0409 (12)0.0021 (12)0.0023 (11)0.0032 (10)
C150.0699 (19)0.0552 (14)0.0451 (13)0.0215 (14)−0.0044 (12)−0.0012 (11)
C160.0740 (19)0.0529 (13)0.0527 (14)0.0134 (14)−0.0027 (13)0.0028 (12)
C170.0508 (15)0.0464 (12)0.0355 (12)−0.0004 (12)−0.0007 (11)0.0017 (10)
C180.0607 (16)0.0527 (13)0.0485 (14)−0.0046 (13)0.0004 (12)0.0035 (11)
C190.0584 (18)0.0646 (15)0.0522 (14)−0.0089 (14)−0.0024 (13)0.0098 (12)
C200.0608 (18)0.0484 (13)0.0370 (13)0.0006 (14)0.0000 (13)0.0067 (11)
C210.073 (2)0.0573 (14)0.0492 (14)0.0029 (14)0.0018 (13)−0.0104 (13)
C220.135 (3)0.0530 (15)0.0855 (19)−0.0078 (19)0.0009 (19)−0.0047 (14)
C230.085 (2)0.124 (2)0.098 (2)0.017 (2)0.016 (2)−0.0481 (19)
C240.113 (2)0.0870 (17)0.0447 (14)−0.0078 (18)−0.0044 (16)−0.0127 (14)
N1—C201.345 (3)C11—H11B0.9700
N1—C211.468 (3)C12—C131.519 (3)
N1—H10.8600C12—H12A0.9700
O1—C201.227 (3)C12—H12B0.9700
C1—C21.522 (3)C13—C141.531 (3)
C1—C101.535 (3)C13—C181.539 (3)
C1—H1A0.9700C13—C171.549 (3)
C1—H1B0.9700C14—C151.524 (3)
C2—C31.502 (3)C14—H140.9800
C2—H2A0.9700C15—C161.542 (2)
C2—H2B0.9700C15—H15A0.9700
C3—C41.513 (3)C15—H15B0.9700
C3—H3A0.9700C16—C171.542 (3)
C3—H3B0.9700C16—H16A0.9700
C4—C51.524 (3)C16—H16B0.9700
C4—H4A0.9700C17—C201.513 (3)
C4—H4B0.9700C17—H170.9800
C5—C61.498 (3)C18—H18A0.9599
C5—C101.541 (3)C18—H18B0.9599
C5—H50.9800C18—H18C0.9599
C6—C71.525 (2)C19—H19A0.9599
C6—H6A0.9700C19—H19B0.9599
C6—H6B0.9700C19—H19C0.9599
C7—C81.524 (2)C21—C231.516 (4)
C7—H7A0.9700C21—C241.523 (3)
C7—H7B0.9700C21—C221.522 (3)
C8—C141.515 (2)C22—H22A0.9599
C8—C91.542 (3)C22—H22B0.9599
C8—H80.9800C22—H22C0.9599
C9—C111.532 (2)C23—H23A0.9599
C9—C101.554 (2)C23—H23B0.9599
C9—H90.9800C23—H23C0.9599
C10—C191.530 (3)C24—H24A0.9599
C11—C121.532 (3)C24—H24B0.9599
C11—H11A0.9700C24—H24C0.9599
C20—N1—C21126.2 (2)C13—C12—H12B109.4
C20—N1—H1116.9C11—C12—H12B109.4
C21—N1—H1116.9H12A—C12—H12B108.0
C2—C1—C10113.91 (17)C12—C13—C14107.69 (17)
C2—C1—H1A108.8C12—C13—C18110.23 (17)
C10—C1—H1A108.8C14—C13—C18112.79 (16)
C2—C1—H1B108.8C12—C13—C17116.70 (16)
C10—C1—H1B108.8C14—C13—C17100.48 (14)
H1A—C1—H1B107.7C18—C13—C17108.70 (17)
C3—C2—C1112.51 (19)C8—C14—C15118.68 (17)
C3—C2—H2A109.1C8—C14—C13113.62 (16)
C1—C2—H2A109.1C15—C14—C13104.39 (16)
C3—C2—H2B109.1C8—C14—H14106.5
C1—C2—H2B109.1C15—C14—H14106.5
H2A—C2—H2B107.8C13—C14—H14106.5
C2—C3—C4112.5 (2)C14—C15—C16104.07 (17)
C2—C3—H3A109.1C14—C15—H15A110.9
C4—C3—H3A109.1C16—C15—H15A110.9
C2—C3—H3B109.1C14—C15—H15B110.9
C4—C3—H3B109.1C16—C15—H15B110.9
H3A—C3—H3B107.8H15A—C15—H15B109.0
C3—C4—C5111.98 (19)C15—C16—C17106.73 (16)
C3—C4—H4A109.2C15—C16—H16A110.4
C5—C4—H4A109.2C17—C16—H16A110.4
C3—C4—H4B109.2C15—C16—H16B110.4
C5—C4—H4B109.2C17—C16—H16B110.4
H4A—C4—H4B107.9H16A—C16—H16B108.6
C6—C5—C4112.29 (18)C20—C17—C16112.92 (19)
C6—C5—C10113.84 (17)C20—C17—C13114.68 (16)
C4—C5—C10113.54 (18)C16—C17—C13104.10 (15)
C6—C5—H5105.4C20—C17—H17108.3
C4—C5—H5105.4C16—C17—H17108.3
C10—C5—H5105.4C13—C17—H17108.3
C5—C6—C7112.36 (18)C13—C18—H18A109.5
C5—C6—H6A109.1C13—C18—H18B109.5
C7—C6—H6A109.1H18A—C18—H18B109.5
C5—C6—H6B109.1C13—C18—H18C109.5
C7—C6—H6B109.1H18A—C18—H18C109.5
H6A—C6—H6B107.9H18B—C18—H18C109.5
C8—C7—C6111.84 (16)C10—C19—H19A109.5
C8—C7—H7A109.2C10—C19—H19B109.5
C6—C7—H7A109.2H19A—C19—H19B109.5
C8—C7—H7B109.2C10—C19—H19C109.5
C6—C7—H7B109.2H19A—C19—H19C109.5
H7A—C7—H7B107.9H19B—C19—H19C109.5
C14—C8—C7112.48 (16)O1—C20—N1122.7 (2)
C14—C8—C9110.13 (16)O1—C20—C17122.2 (2)
C7—C8—C9110.47 (17)N1—C20—C17115.0 (2)
C14—C8—H8107.9N1—C21—C23106.2 (2)
C7—C8—H8107.9N1—C21—C24110.37 (18)
C9—C8—H8107.9C23—C21—C24109.7 (2)
C11—C9—C8112.02 (16)N1—C21—C22109.20 (18)
C11—C9—C10113.93 (16)C23—C21—C22111.0 (2)
C8—C9—C10112.15 (15)C24—C21—C22110.2 (2)
C11—C9—H9106.0C21—C22—H22A109.5
C8—C9—H9106.0C21—C22—H22B109.5
C10—C9—H9106.0H22A—C22—H22B109.5
C19—C10—C1108.81 (17)C21—C22—H22C109.5
C19—C10—C5112.08 (16)H22A—C22—H22C109.5
C1—C10—C5106.56 (16)H22B—C22—H22C109.5
C19—C10—C9110.26 (16)C21—C23—H23A109.5
C1—C10—C9111.04 (15)C21—C23—H23B109.5
C5—C10—C9108.05 (15)H23A—C23—H23B109.5
C9—C11—C12114.43 (17)C21—C23—H23C109.5
C9—C11—H11A108.7H23A—C23—H23C109.5
C12—C11—H11A108.7H23B—C23—H23C109.5
C9—C11—H11B108.7C21—C24—H24A109.5
C12—C11—H11B108.7C21—C24—H24B109.5
H11A—C11—H11B107.6H24A—C24—H24B109.5
C13—C12—C11111.04 (16)C21—C24—H24C109.5
C13—C12—H12A109.4H24A—C24—H24C109.5
C11—C12—H12A109.4H24B—C24—H24C109.5
C10—C1—C2—C3−54.5 (3)C11—C12—C13—C18−66.3 (2)
C1—C2—C3—C450.1 (3)C11—C12—C13—C17169.09 (17)
C2—C3—C4—C5−50.5 (3)C7—C8—C14—C15−55.7 (3)
C3—C4—C5—C6−173.8 (2)C9—C8—C14—C15−179.44 (17)
C3—C4—C5—C1055.3 (3)C7—C8—C14—C13−179.00 (18)
C4—C5—C6—C7175.0 (2)C9—C8—C14—C1357.3 (2)
C10—C5—C6—C7−54.3 (2)C12—C13—C14—C8−61.5 (2)
C5—C6—C7—C853.1 (3)C18—C13—C14—C860.3 (2)
C6—C7—C8—C14−177.64 (18)C17—C13—C14—C8175.87 (17)
C6—C7—C8—C9−54.1 (2)C12—C13—C14—C15167.69 (17)
C14—C8—C9—C11−48.6 (2)C18—C13—C14—C15−70.46 (19)
C7—C8—C9—C11−173.49 (17)C17—C13—C14—C1545.1 (2)
C14—C8—C9—C10−178.19 (16)C8—C14—C15—C16−161.48 (18)
C7—C8—C9—C1056.9 (2)C13—C14—C15—C16−33.8 (2)
C2—C1—C10—C19−65.7 (2)C14—C15—C16—C178.8 (2)
C2—C1—C10—C555.4 (2)C15—C16—C17—C20143.81 (18)
C2—C1—C10—C9172.80 (17)C15—C16—C17—C1318.8 (2)
C6—C5—C10—C19−67.1 (2)C12—C13—C17—C2081.4 (2)
C4—C5—C10—C1963.0 (2)C14—C13—C17—C20−162.6 (2)
C6—C5—C10—C1173.94 (18)C18—C13—C17—C20−44.0 (2)
C4—C5—C10—C1−55.9 (2)C12—C13—C17—C16−154.74 (18)
C6—C5—C10—C954.5 (2)C14—C13—C17—C16−38.70 (19)
C4—C5—C10—C9−175.31 (19)C18—C13—C17—C1679.89 (18)
C11—C9—C10—C19−61.5 (2)C21—N1—C20—O1−4.2 (3)
C8—C9—C10—C1967.1 (2)C21—N1—C20—C17172.60 (17)
C11—C9—C10—C159.2 (2)C16—C17—C20—O1−26.4 (3)
C8—C9—C10—C1−172.21 (16)C13—C17—C20—O192.6 (3)
C11—C9—C10—C5175.74 (18)C16—C17—C20—N1156.77 (17)
C8—C9—C10—C5−55.7 (2)C13—C17—C20—N1−84.2 (2)
C8—C9—C11—C1248.2 (2)C20—N1—C21—C23−178.2 (2)
C10—C9—C11—C12176.84 (18)C20—N1—C21—C2462.9 (3)
C9—C11—C12—C13−53.2 (2)C20—N1—C21—C22−58.5 (3)
C11—C12—C13—C1457.1 (2)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Anti-AIDS agents. Part 36: 17-carboxylated steroids as potential anti-HIV agents.

Authors:  P Xia; Z Y Yang; Y Xia; Y Q Zheng; L M Cosentino; K H Lee
Journal:  Bioorg Med Chem       Date:  1999-09       Impact factor: 3.641

  2 in total
  1 in total

1.  Methyl 3β-methoxy-carbon-yloxy-4,4-di-methyl-17-oxo-16α-(3-oxobut-yl)-16β-carboxylate.

Authors:  Xin Yan; Shiqing Xu; Jingmei Wang; Ying Chen; Peng Xia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-14
  1 in total

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