Literature DB >> 21582238

1-(2,6-Dichloro-phen-yl)indolin-2-one.

Muhammad Hanif, Muhammad Rafiq, Muhammad Saleem, Ghulam Qadeer, Wai-Yeung Wong.   

Abstract

In the mol-ecule of the title compound, C(14)H(9)Cl(2)NO, the planar indole ring system [with a maximum deviation of 0.020 (2) Å for the N atom] is oriented at a dihedral angle of 72.17 (3)° with respect to the phenyl ring. In the crystal structure, weak inter-molecular C-H⋯O hydrogen bonds link the mol-ecules. A weak C-H⋯π inter-action may further stabilize the structure.

Entities:  

Year:  2009        PMID: 21582238      PMCID: PMC2968669          DOI: 10.1107/S1600536809005807

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Hibino & Choshi (2002 ▶); Somei & Yamada (2003 ▶); Popp (1977 ▶, 1984 ▶). For related structures, see: Chakraborty & Talapatra (1985 ▶); Chakraborty et al. (1985 ▶); De (1992 ▶); De & Kitagawa (1991a ▶,b ▶); Itai et al. (1978 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C14H9Cl2NO M = 278.12 Monoclinic, a = 7.1412 (8) Å b = 8.0241 (9) Å c = 11.0510 (13) Å β = 105.789 (2)° V = 609.35 (12) Å3 Z = 2 Mo Kα radiation μ = 0.52 mm−1 T = 173 K 0.30 × 0.24 × 0.20 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.755, T max = 0.902 3710 measured reflections 2328 independent reflections 2295 reflections with I > 2σ(I) R int = 0.014

Refinement

R[F 2 > 2σ(F 2)] = 0.021 wR(F 2) = 0.060 S = 1.06 2328 reflections 163 parameters 1 restraint H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.16 e Å−3 Absolute structure: Flack (1983 ▶), 705 Friedel pairs Flack parameter: −0.02 (4) Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶) and PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809005807/hk2625sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005807/hk2625Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H9Cl2NOF(000) = 284
Mr = 278.12Dx = 1.516 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 2148 reflections
a = 7.1412 (8) Åθ = 5.2–24.3°
b = 8.0241 (9) ŵ = 0.52 mm1
c = 11.0510 (13) ÅT = 173 K
β = 105.789 (2)°Block, yellow
V = 609.35 (12) Å30.30 × 0.24 × 0.20 mm
Z = 2
Bruker SMART CCD area-detector diffractometer2328 independent reflections
Radiation source: fine-focus sealed tube2295 reflections with I > 2σ(I)
graphiteRint = 0.014
ω and φ scansθmax = 28.3°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −9→9
Tmin = 0.755, Tmax = 0.902k = −9→10
3710 measured reflectionsl = −14→11
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.021H-atom parameters constrained
wR(F2) = 0.060w = 1/[σ2(Fo2) + (0.0379P)2 + 0.0681P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
2328 reflectionsΔρmax = 0.19 e Å3
163 parametersΔρmin = −0.16 e Å3
1 restraintAbsolute structure: Flack (1983), 705 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.02 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.57381 (5)0.76042 (5)0.02255 (3)0.03458 (10)
Cl20.05095 (6)0.97960 (6)0.25885 (3)0.03843 (11)
O10.41005 (16)0.54202 (14)0.22865 (9)0.0304 (2)
N10.43177 (17)0.82839 (15)0.24614 (10)0.0230 (2)
C10.2984 (2)0.86900 (18)0.12903 (12)0.0224 (2)
C20.3471 (2)0.83882 (17)0.01693 (12)0.0243 (3)
C30.2172 (2)0.8739 (2)−0.09901 (13)0.0302 (3)
H3A0.25120.8509−0.17470.036*
C40.0386 (2)0.9425 (2)−0.10285 (13)0.0330 (3)
H4A−0.05070.9663−0.18190.040*
C5−0.0126 (2)0.9774 (2)0.00703 (14)0.0304 (3)
H5A−0.13501.02660.00360.036*
C60.1176 (2)0.93932 (19)0.12198 (12)0.0266 (3)
C70.48390 (19)0.66561 (18)0.28346 (12)0.0233 (3)
C80.6499 (2)0.67599 (18)0.40391 (12)0.0249 (3)
H8A0.61350.62230.47490.030*
H8B0.76880.62190.39290.030*
C90.6805 (2)0.85913 (18)0.42570 (12)0.0234 (3)
C100.54970 (19)0.94523 (17)0.32861 (11)0.0219 (2)
C110.5448 (2)1.11669 (19)0.32044 (13)0.0286 (3)
H11A0.45581.17310.25330.034*
C120.6774 (2)1.2032 (2)0.41607 (14)0.0335 (3)
H12A0.67831.32160.41380.040*
C130.8073 (2)1.1219 (2)0.51397 (15)0.0357 (3)
H13A0.89501.18460.57780.043*
C140.8101 (2)0.9477 (2)0.51951 (13)0.0310 (3)
H14A0.89940.89120.58650.037*
U11U22U33U12U13U23
Cl10.03021 (17)0.0422 (2)0.03333 (16)0.00882 (15)0.01213 (12)−0.00025 (14)
Cl20.04088 (19)0.0480 (2)0.03094 (16)0.01679 (17)0.01741 (14)0.00795 (15)
O10.0330 (5)0.0230 (5)0.0309 (5)−0.0025 (4)0.0011 (4)−0.0026 (4)
N10.0249 (5)0.0208 (5)0.0204 (5)0.0012 (4)0.0010 (4)−0.0009 (4)
C10.0235 (6)0.0220 (6)0.0197 (5)0.0010 (5)0.0025 (5)0.0010 (4)
C20.0245 (6)0.0223 (6)0.0256 (6)0.0011 (5)0.0063 (5)−0.0021 (5)
C30.0358 (8)0.0322 (8)0.0206 (6)0.0009 (6)0.0043 (5)−0.0003 (5)
C40.0320 (7)0.0379 (8)0.0240 (6)0.0021 (6)−0.0012 (5)0.0041 (6)
C50.0242 (6)0.0343 (8)0.0303 (6)0.0058 (6)0.0035 (5)0.0062 (6)
C60.0274 (7)0.0276 (7)0.0251 (6)0.0031 (6)0.0077 (5)0.0034 (5)
C70.0216 (6)0.0239 (6)0.0229 (5)0.0004 (5)0.0037 (5)0.0007 (4)
C80.0235 (6)0.0236 (6)0.0241 (6)0.0037 (5)0.0006 (5)0.0007 (5)
C90.0224 (6)0.0244 (7)0.0226 (5)0.0010 (5)0.0049 (5)−0.0020 (5)
C100.0236 (6)0.0225 (6)0.0194 (5)−0.0006 (5)0.0055 (4)−0.0032 (4)
C110.0352 (8)0.0236 (7)0.0290 (6)0.0008 (6)0.0122 (6)0.0003 (5)
C120.0397 (8)0.0230 (7)0.0414 (7)−0.0057 (6)0.0173 (7)−0.0081 (6)
C130.0303 (8)0.0373 (8)0.0389 (8)−0.0068 (7)0.0085 (6)−0.0162 (6)
C140.0259 (7)0.0371 (8)0.0272 (6)−0.0002 (6)0.0023 (5)−0.0080 (5)
C1—C61.392 (2)C8—C91.4955 (19)
C1—C21.3958 (18)C8—H8A0.9900
C1—N11.4203 (15)C8—H8B0.9900
C2—C31.3908 (19)C9—C141.3834 (19)
C2—Cl11.7223 (14)C9—C101.3984 (18)
C3—C41.379 (2)C10—C111.379 (2)
C3—H3A0.9500C10—N11.4146 (16)
C4—C51.389 (2)C11—C121.397 (2)
C4—H4A0.9500C11—H11A0.9500
C5—C61.3890 (19)C12—C131.382 (2)
C5—H5A0.9500C12—H12A0.9500
C6—Cl21.7353 (14)C13—C141.399 (2)
C7—O11.2061 (17)C13—H13A0.9500
C7—N11.3896 (18)C14—H14A0.9500
C7—C81.5250 (17)
C6—C1—C2118.16 (12)C9—C8—H8B111.0
C6—C1—N1121.73 (12)C7—C8—H8B111.0
C2—C1—N1120.12 (12)H8A—C8—H8B109.0
C3—C2—C1121.19 (13)C14—C9—C10119.49 (14)
C3—C2—Cl1119.46 (11)C14—C9—C8131.59 (14)
C1—C2—Cl1119.34 (10)C10—C9—C8108.91 (12)
C4—C3—C2119.23 (13)C11—C10—C9122.89 (13)
C4—C3—H3A120.4C11—C10—N1128.25 (13)
C2—C3—H3A120.4C9—C10—N1108.86 (12)
C3—C4—C5121.01 (13)C10—C11—C12116.53 (14)
C3—C4—H4A119.5C10—C11—H11A121.7
C5—C4—H4A119.5C12—C11—H11A121.7
C4—C5—C6119.01 (14)C13—C12—C11121.99 (15)
C4—C5—H5A120.5C13—C12—H12A119.0
C6—C5—H5A120.5C11—C12—H12A119.0
C5—C6—C1121.38 (12)C12—C13—C14120.31 (14)
C5—C6—Cl2118.81 (11)C12—C13—H13A119.8
C1—C6—Cl2119.81 (10)C14—C13—H13A119.8
O1—C7—N1125.35 (11)C9—C14—C13118.77 (14)
O1—C7—C8127.81 (13)C9—C14—H14A120.6
N1—C7—C8106.83 (11)C13—C14—H14A120.6
C9—C8—C7103.83 (11)C7—N1—C10111.54 (10)
C9—C8—H8A111.0C7—N1—C1123.04 (11)
C7—C8—H8A111.0C10—N1—C1124.68 (11)
D—H···AD—HH···AD···AD—H···A
C4—H4A···O1i0.952.553.2267 (19)128
C8—H8A···Cg1ii0.992.743.6125 (23)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C4—H4A⋯O1i0.952.553.2267 (19)128
C8—H8ACg1ii0.992.743.6125 (23)147

Symmetry codes: (i) ; (ii) . Cg1 is the centroid of the C9–C14 ring.

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