Literature DB >> 21582228

4-[5-(4-Fluoro-phen-yl)-1H-imidazol-4-yl]pyridine.

Pierre Koch, Dieter Schollmeyer, Stefan Laufer.   

Abstract

In the title compound, C(14)H(10)FN(3), the imidazole ring makes dihedral angles of 28.2 (1) and 36.60 (9)° with the pyridine ring and the 4-fluoro-phenyl ring, respectively. The pyridine ring forms a dihedral angle of 44.68 (9)° with the 4-fluoro-phenyl ring. Inter-molecular N-H⋯N hydrogen bonds are observed in the crystal structure.

Entities:  

Year:  2009        PMID: 21582228      PMCID: PMC2968498          DOI: 10.1107/S1600536809005650

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of the title compound, see: Liverton et al. (1999 ▶). For applications of functionalized 5(4)-(4-fluoro­phen­yl)-4(5)-(pyridin-4-yl)imidazoles, see: Koch et al. (2008 ▶), Peifer et al. (2006 ▶).

Experimental

Crystal data

C14H10FN3 M = 239.25 Orthorhombic, a = 9.217 (2) Å b = 8.1064 (5) Å c = 30.665 (5) Å V = 2291.1 (6) Å3 Z = 8 Cu Kα radiation μ = 0.80 mm−1 T = 193 K 0.54 × 0.20 × 0.13 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: none 2121 measured reflections 2121 independent reflections 1707 reflections with I > 2σ(I) 3 standard reflections frequency: 60 min intensity decay: 2%

Refinement

R[F 2 > 2σ(F 2)] = 0.076 wR(F 2) = 0.201 S = 1.09 2121 reflections 163 parameters H-atom parameters constrained Δρmax = 0.58 e Å−3 Δρmin = −0.54 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: CORINC (Dräger & Gattow, 1971 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809005650/im2099sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005650/im2099Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H10FN3Dx = 1.387 Mg m3
Mr = 239.25Melting point: 285.5 K
Orthorhombic, PbcaCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ac 2abCell parameters from 25 reflections
a = 9.217 (2) Åθ = 31–53°
b = 8.1064 (5) ŵ = 0.80 mm1
c = 30.665 (5) ÅT = 193 K
V = 2291.1 (6) Å3Needle, colourless
Z = 80.54 × 0.20 × 0.13 mm
F(000) = 992
Enraf–Nonius CAD-4 diffractometerRint = 0.0000
Radiation source: rotating anodeθmax = 69.6°, θmin = 2.9°
graphiteh = 0→11
ω/2θ scansk = 0→9
2121 measured reflectionsl = −36→0
2121 independent reflections3 standard reflections every 60 min
1707 reflections with I > 2σ(I) intensity decay: 2%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.076Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.201H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.1422P)2 + 0.0554P] where P = (Fo2 + 2Fc2)/3
2121 reflections(Δ/σ)max < 0.001
163 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = −0.54 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F10.0873 (2)0.0708 (3)0.21998 (6)0.0596 (6)
N1−0.0150 (2)0.2988 (2)0.42177 (7)0.0243 (5)
H1−0.10700.28830.41300.029*
C20.1085 (2)0.2755 (3)0.39720 (8)0.0224 (5)
C30.2212 (3)0.3123 (3)0.42585 (8)0.0227 (5)
N40.1672 (2)0.3595 (3)0.46674 (7)0.0285 (5)
C50.0257 (3)0.3479 (3)0.46279 (9)0.0279 (6)
H5−0.04080.37080.48570.033*
C60.1015 (2)0.2250 (3)0.35030 (8)0.0228 (5)
C70.1984 (3)0.2872 (3)0.31898 (9)0.0286 (6)
H70.26820.36690.32770.034*
C80.1955 (3)0.2353 (3)0.27519 (9)0.0338 (6)
H80.26390.27640.25470.041*
C90.0907 (3)0.1233 (3)0.26276 (9)0.0365 (7)
C10−0.0096 (3)0.0625 (3)0.29215 (9)0.0353 (6)
H10−0.0819−0.01310.28280.042*
C11−0.0043 (3)0.1128 (3)0.33599 (8)0.0274 (6)
H11−0.07310.07050.35620.033*
C120.3785 (3)0.3036 (3)0.41935 (8)0.0216 (5)
C130.4700 (3)0.4057 (3)0.44398 (8)0.0246 (5)
H130.42990.48140.46430.030*
C140.6182 (3)0.3961 (3)0.43855 (8)0.0282 (6)
H140.67830.46500.45590.034*
N150.6824 (2)0.2927 (3)0.40951 (7)0.0287 (5)
C160.5937 (3)0.1937 (3)0.38606 (9)0.0290 (6)
H160.63670.11930.36590.035*
C170.4456 (3)0.1942 (3)0.38966 (8)0.0264 (6)
H170.38850.12180.37240.032*
U11U22U33U12U13U23
F10.0846 (15)0.0588 (13)0.0354 (10)−0.0016 (11)−0.0071 (9)−0.0100 (9)
N10.0210 (10)0.0106 (9)0.0414 (12)−0.0012 (7)0.0000 (8)−0.0015 (8)
C20.0225 (11)0.0050 (10)0.0398 (14)0.0003 (7)0.0019 (9)0.0031 (9)
C30.0277 (13)0.0048 (10)0.0355 (12)−0.0005 (8)0.0005 (9)0.0007 (8)
N40.0293 (11)0.0182 (10)0.0379 (12)−0.0021 (8)0.0020 (9)−0.0029 (8)
C50.0273 (12)0.0166 (11)0.0399 (14)−0.0008 (9)0.0058 (10)−0.0027 (10)
C60.0234 (11)0.0078 (10)0.0371 (13)0.0037 (8)−0.0022 (9)0.0011 (9)
C70.0308 (12)0.0139 (11)0.0410 (15)0.0016 (9)−0.0012 (10)0.0027 (10)
C80.0379 (14)0.0257 (13)0.0377 (15)0.0053 (10)0.0035 (11)0.0069 (11)
C90.0499 (17)0.0278 (14)0.0319 (14)0.0083 (11)−0.0085 (12)−0.0012 (11)
C100.0383 (14)0.0215 (12)0.0460 (16)−0.0033 (11)−0.0113 (12)−0.0041 (11)
C110.0277 (12)0.0139 (11)0.0407 (14)−0.0017 (9)−0.0044 (10)0.0020 (9)
C120.0239 (12)0.0070 (10)0.0337 (13)−0.0007 (8)−0.0014 (9)0.0044 (8)
C130.0282 (12)0.0151 (11)0.0306 (12)−0.0020 (9)−0.0004 (9)−0.0006 (9)
C140.0294 (13)0.0194 (12)0.0357 (13)−0.0036 (9)−0.0039 (10)−0.0016 (10)
N150.0231 (10)0.0223 (11)0.0408 (12)0.0008 (8)−0.0016 (9)0.0022 (9)
C160.0286 (13)0.0156 (12)0.0429 (15)0.0050 (9)−0.0006 (10)−0.0024 (10)
C170.0273 (12)0.0091 (10)0.0427 (15)−0.0001 (9)−0.0044 (10)−0.0017 (9)
F1—C91.380 (3)C8—H80.9500
N1—C51.372 (3)C9—C101.382 (4)
N1—C21.378 (3)C10—C111.406 (4)
N1—H10.8936C10—H100.9500
C2—C31.393 (3)C11—H110.9500
C2—C61.496 (3)C12—C131.402 (3)
C3—N41.402 (3)C12—C171.414 (3)
C3—C121.465 (3)C13—C141.379 (3)
N4—C51.313 (3)C13—H130.9500
C5—H50.9500C14—N151.359 (3)
C6—C111.403 (3)C14—H140.9500
C6—C71.405 (3)N15—C161.353 (3)
C7—C81.407 (4)C16—C171.370 (3)
C7—H70.9500C16—H160.9500
C8—C91.379 (4)C17—H170.9500
C5—N1—C2108.4 (2)F1—C9—C10119.7 (3)
C5—N1—H1124.3C9—C10—C11119.8 (2)
C2—N1—H1127.3C9—C10—H10120.1
N1—C2—C3104.0 (2)C11—C10—H10120.1
N1—C2—C6121.9 (2)C6—C11—C10120.7 (2)
C3—C2—C6134.2 (2)C6—C11—H11119.6
C2—C3—N4111.0 (2)C10—C11—H11119.6
C2—C3—C12129.9 (2)C13—C12—C17117.0 (2)
N4—C3—C12119.0 (2)C13—C12—C3119.6 (2)
C5—N4—C3104.5 (2)C17—C12—C3123.4 (2)
N4—C5—N1112.1 (2)C14—C13—C12119.8 (2)
N4—C5—H5123.9C14—C13—H13120.1
N1—C5—H5123.9C12—C13—H13120.1
C11—C6—C7117.4 (2)N15—C14—C13123.1 (2)
C11—C6—C2120.5 (2)N15—C14—H14118.5
C7—C6—C2122.1 (2)C13—C14—H14118.5
C6—C7—C8122.2 (2)C16—N15—C14116.8 (2)
C6—C7—H7118.9N15—C16—C17123.9 (2)
C8—C7—H7118.9N15—C16—H16118.0
C9—C8—C7118.3 (3)C17—C16—H16118.0
C9—C8—H8120.9C16—C17—C12119.3 (2)
C7—C8—H8120.9C16—C17—H17120.3
C8—C9—F1118.8 (3)C12—C17—H17120.3
C8—C9—C10121.5 (3)
C5—N1—C2—C30.3 (2)C7—C8—C9—C100.0 (4)
C5—N1—C2—C6−178.6 (2)C8—C9—C10—C11−1.1 (4)
N1—C2—C3—N4−0.9 (2)F1—C9—C10—C11178.5 (2)
C6—C2—C3—N4177.8 (2)C7—C6—C11—C101.6 (3)
N1—C2—C3—C12177.2 (2)C2—C6—C11—C10−178.8 (2)
C6—C2—C3—C12−4.1 (4)C9—C10—C11—C60.2 (4)
C2—C3—N4—C51.2 (2)C2—C3—C12—C13153.7 (2)
C12—C3—N4—C5−177.14 (19)N4—C3—C12—C13−28.4 (3)
C3—N4—C5—N1−1.0 (3)C2—C3—C12—C17−27.5 (4)
C2—N1—C5—N40.4 (3)N4—C3—C12—C17150.5 (2)
N1—C2—C6—C11−37.4 (3)C17—C12—C13—C140.0 (3)
C3—C2—C6—C11144.1 (2)C3—C12—C13—C14178.9 (2)
N1—C2—C6—C7142.3 (2)C12—C13—C14—N151.1 (4)
C3—C2—C6—C7−36.3 (4)C13—C14—N15—C16−1.5 (4)
C11—C6—C7—C8−2.7 (3)C14—N15—C16—C170.9 (4)
C2—C6—C7—C8177.6 (2)N15—C16—C17—C120.1 (4)
C6—C7—C8—C92.0 (4)C13—C12—C17—C16−0.5 (3)
C7—C8—C9—F1−179.6 (2)C3—C12—C17—C16−179.4 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1···N15i0.891.942.815 (3)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯N15i0.891.942.815 (3)164

Symmetry code: (i) .

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