Literature DB >> 21582218

2-Isobutyl-2-phosphabicyclo-[3.3.1]nonane 2-selenide.

Peter N Bungu, Stefanus Otto.   

Abstract

The title compound, C(12)H(23)PSe, represents the first structure of a phosphine containing the bicyclic 2-phospha-bicyclo-[3.3.1]nonane (VCH) unit. It contains two chiral centres per mol-ecule which can be either R,R- or S,S and crystallizes as a centrosymmetric, racemic micture of the enanti-omers. The P-Se bond distance of 2.1360 (16) Å is typical for these compounds. The Tolman cone angle (2.28 Å from P) was calculated as 163°, and the effective cone angle (using the crystallographically determined P-Se bond distance) is 168°.

Entities:  

Year:  2009        PMID: 21582218      PMCID: PMC2968513          DOI: 10.1107/S1600536809005492

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of phosphine selenides, see: Otto et al. (2005 ▶). For the evaluation of ligand electronic properties, see: Allen & Taylor (1982 ▶); Bungu & Otto (2007b ▶); Muller et al. (2008 ▶); Otto & Roodt (2004 ▶); Roodt & Steyn (2000 ▶). For the application of bicyclic ligands in catalysis, see: Bungu & Otto (2007a ▶); Crause et al. (2003 ▶); Dwyer et al. (2004 ▶); Steynberg et al. (2003 ▶); Van Winkle et al. (1969 ▶). For information on cone angles, see: Tolman (1977 ▶); Otto (2001 ▶).

Experimental

Crystal data

C12H23PSe M = 277.23 Monoclinic, a = 10.763 (2) Å b = 7.2540 (15) Å c = 17.530 (4) Å β = 97.93 (3)° V = 1355.6 (5) Å3 Z = 4 Mo Kα radiation μ = 2.85 mm−1 T = 293 K 0.14 × 0.12 × 0.08 mm

Data collection

Bruker X8 APEXII 4K KappaCCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.691, T max = 0.804 9132 measured reflections 3366 independent reflections 1658 reflections with I > 2σ(I) R int = 0.062

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.181 S = 1.02 3366 reflections 129 parameters H-atom parameters constrained Δρmax = 0.58 e Å−3 Δρmin = −0.58 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT-Plus (Bruker, 2004 ▶); data reduction: SAINT-Plus and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Berndt, 2001 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809005492/hb2909sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005492/hb2909Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H23PSeF(000) = 576
Mr = 277.23Dx = 1.358 Mg m3
Monoclinic, P2/cMo Kα radiation, λ = 0.71073 Å
a = 10.763 (2) ÅCell parameters from 1002 reflections
b = 7.2540 (15) Åθ = 2.8–25.7°
c = 17.530 (4) ŵ = 2.85 mm1
β = 97.93 (3)°T = 293 K
V = 1355.6 (5) Å3Block, colourless
Z = 40.14 × 0.12 × 0.08 mm
Bruker X8 APEXII 4K KappaCCD diffractometer3366 independent reflections
Radiation source: fine-focus sealed tube1658 reflections with I > 2σ(I)
graphiteRint = 0.062
Detector resolution: 512 pixels mm-1θmax = 28.3°, θmin = 1.9°
φ and ω scansh = −11→14
Absorption correction: multi-scan (SADABS; Bruker, 2008)k = −8→9
Tmin = 0.691, Tmax = 0.804l = −23→23
9132 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.059Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.181H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0816P)2 + 0.9034P] where P = (Fo2 + 2Fc2)/3
3366 reflections(Δ/σ)max < 0.001
129 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = −0.58 e Å3
Experimental. The intensity data were collected on a Bruker X8 ApexII 4 K Kappa CCD diffractometer using an exposure time of 40 s/frame with a frame width of 0.3°; a total of 1315 frames were collected.The crystals were of poor quality and were, as a precautionary measure, covered with Canada balsam. Consequently some intensity in the reflextions were sacrificed and the completeness is somewhat low at high angles.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
P0.21847 (13)−0.0934 (2)−0.03355 (8)0.0418 (4)
Se0.23308 (6)0.16679 (9)0.02405 (4)0.0633 (3)
C110.1179 (6)−0.0851 (9)−0.1269 (3)0.0588 (16)
H11A0.0957−0.2100−0.14330.071*
H11B0.0410−0.0206−0.12070.071*
C120.1797 (6)0.0105 (11)−0.1899 (4)0.0712 (19)
H12A0.18700.1411−0.17800.085*
H12B0.1251−0.0022−0.23840.085*
C130.3099 (7)−0.0640 (12)−0.1997 (4)0.078 (2)
H130.34110.0092−0.24010.094*
C140.3999 (6)−0.0340 (10)−0.1255 (4)0.0699 (19)
H14A0.39400.0930−0.10900.084*
H14B0.4852−0.0554−0.13530.084*
C150.3697 (5)−0.1675 (8)−0.0582 (4)0.0528 (15)
H150.4336−0.1494−0.01330.063*
C160.3785 (6)−0.3676 (8)−0.0870 (4)0.0610 (17)
H16A0.4652−0.3938−0.09240.073*
H16B0.3544−0.4505−0.04810.073*
C170.2984 (7)−0.4081 (11)−0.1622 (4)0.082 (2)
H17A0.2112−0.4131−0.15380.099*
H17B0.3208−0.5285−0.18020.099*
C180.3119 (8)−0.2667 (14)−0.2240 (5)0.091 (2)
H18A0.2446−0.2859−0.26610.110*
H18B0.3903−0.2900−0.24380.110*
C210.1449 (5)−0.2707 (7)0.0190 (3)0.0452 (13)
H21A0.0547−0.25580.00760.054*
H21B0.1655−0.3899−0.00100.054*
C220.1795 (5)−0.2755 (8)0.1068 (3)0.0490 (14)
H220.1706−0.15050.12660.059*
C230.0893 (6)−0.4026 (10)0.1427 (4)0.0680 (18)
H23A0.0046−0.36180.12770.102*
H23B0.1087−0.39910.19780.102*
H23C0.0981−0.52650.12500.102*
C240.3154 (6)−0.3372 (10)0.1303 (4)0.0708 (19)
H24A0.3258−0.46030.11210.106*
H24B0.3350−0.33450.18540.106*
H24C0.3707−0.25540.10800.106*
U11U22U33U12U13U23
P0.0394 (8)0.0373 (7)0.0482 (8)−0.0002 (6)0.0044 (6)−0.0054 (6)
Se0.0709 (5)0.0383 (4)0.0804 (5)−0.0015 (3)0.0100 (3)−0.0152 (3)
C110.056 (4)0.061 (4)0.057 (4)0.000 (3)0.002 (3)0.007 (3)
C120.062 (4)0.085 (5)0.063 (4)−0.003 (4)−0.001 (3)0.022 (4)
C130.067 (5)0.105 (7)0.060 (4)−0.018 (4)0.001 (3)0.017 (4)
C140.062 (4)0.074 (5)0.077 (5)−0.013 (3)0.020 (4)−0.006 (4)
C150.039 (3)0.054 (4)0.065 (4)−0.005 (3)0.006 (3)−0.014 (3)
C160.055 (4)0.047 (4)0.083 (5)0.008 (3)0.018 (3)−0.010 (3)
C170.091 (6)0.080 (5)0.078 (5)−0.010 (4)0.019 (4)−0.032 (4)
C180.093 (6)0.108 (7)0.075 (5)−0.014 (5)0.020 (4)−0.018 (5)
C210.047 (3)0.036 (3)0.052 (3)0.001 (2)0.008 (3)−0.003 (2)
C220.056 (4)0.042 (3)0.049 (3)0.000 (3)0.009 (3)−0.004 (3)
C230.073 (5)0.063 (4)0.073 (4)−0.001 (4)0.027 (4)0.010 (3)
C240.068 (4)0.078 (5)0.062 (4)−0.008 (4)−0.009 (3)0.013 (4)
P—C151.822 (6)C16—H16A0.9700
P—C211.825 (6)C16—H16B0.9700
P—C111.835 (6)C17—C181.514 (12)
P—Se2.1360 (16)C17—H17A0.9700
C11—C121.531 (9)C17—H17B0.9700
C11—H11A0.9700C18—H18A0.9700
C11—H11B0.9700C18—H18B0.9700
C12—C131.534 (10)C21—C221.533 (8)
C12—H12A0.9700C21—H21A0.9700
C12—H12B0.9700C21—H21B0.9700
C13—C141.527 (9)C22—C241.530 (9)
C13—C181.532 (12)C22—C231.536 (8)
C13—H130.9800C22—H220.9800
C14—C151.594 (9)C23—H23A0.9600
C14—H14A0.9700C23—H23B0.9600
C14—H14B0.9700C23—H23C0.9600
C15—C161.544 (8)C24—H24A0.9600
C15—H150.9800C24—H24B0.9600
C16—C171.501 (9)C24—H24C0.9600
C15—P—C21112.0 (3)C17—C16—H16B108.6
C15—P—C11103.6 (3)C15—C16—H16B108.6
C21—P—C11103.3 (3)H16A—C16—H16B107.6
C15—P—Se111.27 (19)C16—C17—C18113.3 (6)
C21—P—Se113.12 (19)C16—C17—H17A108.9
C11—P—Se112.9 (2)C18—C17—H17A108.9
C12—C11—P113.3 (4)C16—C17—H17B108.9
C12—C11—H11A108.9C18—C17—H17B108.9
P—C11—H11A108.9H17A—C17—H17B107.7
C12—C11—H11B108.9C17—C18—C13116.4 (6)
P—C11—H11B108.9C17—C18—H18A108.2
H11A—C11—H11B107.7C13—C18—H18A108.2
C11—C12—C13114.6 (6)C17—C18—H18B108.2
C11—C12—H12A108.6C13—C18—H18B108.2
C13—C12—H12A108.6H18A—C18—H18B107.3
C11—C12—H12B108.6C22—C21—P117.4 (4)
C13—C12—H12B108.6C22—C21—H21A107.9
H12A—C12—H12B107.6P—C21—H21A107.9
C14—C13—C18110.0 (7)C22—C21—H21B107.9
C14—C13—C12109.6 (6)P—C21—H21B107.9
C18—C13—C12114.7 (6)H21A—C21—H21B107.2
C14—C13—H13107.4C24—C22—C21111.5 (5)
C18—C13—H13107.4C24—C22—C23110.5 (5)
C12—C13—H13107.4C21—C22—C23110.1 (5)
C13—C14—C15112.0 (5)C24—C22—H22108.2
C13—C14—H14A109.2C21—C22—H22108.2
C15—C14—H14A109.2C23—C22—H22108.2
C13—C14—H14B109.2C22—C23—H23A109.5
C15—C14—H14B109.2C22—C23—H23B109.5
H14A—C14—H14B107.9H23A—C23—H23B109.5
C16—C15—C14107.5 (5)C22—C23—H23C109.5
C16—C15—P116.8 (4)H23A—C23—H23C109.5
C14—C15—P106.0 (4)H23B—C23—H23C109.5
C16—C15—H15108.7C22—C24—H24A109.5
C14—C15—H15108.7C22—C24—H24B109.5
P—C15—H15108.7H24A—C24—H24B109.5
C17—C16—C15114.7 (6)C22—C24—H24C109.5
C17—C16—H16A108.6H24A—C24—H24C109.5
C15—C16—H16A108.6H24B—C24—H24C109.5
C15—P—C11—C12−45.9 (6)C11—P—C15—C1450.9 (4)
C21—P—C11—C12−162.9 (5)Se—P—C15—C14−70.7 (4)
Se—P—C11—C1274.6 (5)C14—C15—C16—C17−54.2 (7)
P—C11—C12—C1352.2 (8)P—C15—C16—C1764.7 (7)
C11—C12—C13—C14−62.0 (8)C15—C16—C17—C1848.6 (9)
C11—C12—C13—C1862.3 (8)C16—C17—C18—C13−45.1 (10)
C18—C13—C14—C15−55.5 (8)C14—C13—C18—C1748.8 (9)
C12—C13—C14—C1571.5 (8)C12—C13—C18—C17−75.3 (8)
C13—C14—C15—C1658.2 (7)C15—P—C21—C2287.0 (5)
C13—C14—C15—P−67.5 (6)C11—P—C21—C22−162.1 (4)
C21—P—C15—C1641.8 (6)Se—P—C21—C22−39.8 (5)
C11—P—C15—C16−68.9 (5)P—C21—C22—C24−69.3 (6)
Se—P—C15—C16169.6 (4)P—C21—C22—C23167.7 (4)
C21—P—C15—C14161.6 (4)
PSe—P1JSe—P
PMe3i2.111 (3)684
PCy3ii2.108 (1)676
VCH-iBuiii2.1360 (16)672,687
Phoban-Phiv2.1090 (9)689,717
PPhCy2v2.1260 (8)701
P(o-Tol)3vi2.116 (5)708
PPh2Cyv2.111 (2)725
PPh3vii2.106 (1)733
P(NMe2)3viii2.120 (1)797
Table 1

X-ray and spectroscopic data (Å, Hz) for selected phosphine selenides.

PSe—P1JSe—P
PMe3i2.111 (3)684
PCy3ii2.108 (1)676
VCH-iBuiii2.1360 (16)672, 687
Phoban-Phiv2.1090 (9)689, 717
PPhCy2v2.1260 (8)701
P(o-Tol)3vi2.116 (5)708
PPh2Cyv2.111 (2)725
PPh3vii2.106 (1)733
P(NMe2)3viii2.120 (1)797

Notes: (i) Cogne et al. (1980 ▶); (ii) Davies et al. (1991 ▶); (iii) this work; (iv) Bungu & Otto (2007b ▶); (v) Muller et al. (2008 ▶); (vi) Cameron & Dahlen (1975 ▶); (vii) Codding & Kerr (1979 ▶); (viii) Rømming & Songstad (1979 ▶).

  4 in total

1.  trans-Chloro(methyl)bis(tricyclohexylphosphine)platinum(II).

Authors:  S Otto
Journal:  Acta Crystallogr C       Date:  2001-07-09       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Rapid phosphorus(III) ligand evaluation utilising potassium selenocyanate.

Authors:  Alfred Muller; Stefanus Otto; Andreas Roodt
Journal:  Dalton Trans       Date:  2007-11-16       Impact factor: 4.390

4.  Bicyclic phosphines as ligands for cobalt catalysed hydroformylation. Crystal structures of [Co(Phoban[3.3.1]-Q)(CO)(3)](2) (Q = C(2)H(5), C(5)H(11), C(3)H(6)NMe(2), C(6)H(11)).

Authors:  Peter N Bungu; Stefanus Otto
Journal:  Dalton Trans       Date:  2007-05-01       Impact factor: 4.390

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.