| Literature DB >> 21582218 |
Abstract
The title compound, C(12)H(23)PSe, represents the first structure of a phosphine containing the bicyclic 2-phospha-bicyclo-[3.3.1]nonane (VCH) unit. It contains two chiral centres per mol-ecule which can be either R,R- or S,S and crystallizes as a centrosymmetric, racemic micture of the enanti-omers. The P-Se bond distance of 2.1360 (16) Å is typical for these compounds. The Tolman cone angle (2.28 Å from P) was calculated as 163°, and the effective cone angle (using the crystallographically determined P-Se bond distance) is 168°.Entities:
Year: 2009 PMID: 21582218 PMCID: PMC2968513 DOI: 10.1107/S1600536809005492
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H23PSe | |
| Monoclinic, | Mo |
| Cell parameters from 1002 reflections | |
| θ = 2.8–25.7° | |
| µ = 2.85 mm−1 | |
| β = 97.93 (3)° | |
| Block, colourless | |
| 0.14 × 0.12 × 0.08 mm |
| Bruker X8 APEXII 4K KappaCCD diffractometer | 3366 independent reflections |
| Radiation source: fine-focus sealed tube | 1658 reflections with |
| graphite | |
| Detector resolution: 512 pixels mm-1 | θmax = 28.3°, θmin = 1.9° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 9132 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3366 reflections | (Δ/σ)max < 0.001 |
| 129 parameters | Δρmax = 0.58 e Å−3 |
| 0 restraints | Δρmin = −0.58 e Å−3 |
| Experimental. The intensity data were collected on a Bruker X8 ApexII 4 K Kappa CCD diffractometer using an exposure time of 40 s/frame with a frame width of 0.3°; a total of 1315 frames were collected.The crystals were of poor quality and were, as a precautionary measure, covered with Canada balsam. Consequently some intensity in the reflextions were sacrificed and the completeness is somewhat low at high angles. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| P | 0.21847 (13) | −0.0934 (2) | −0.03355 (8) | 0.0418 (4) | |
| Se | 0.23308 (6) | 0.16679 (9) | 0.02405 (4) | 0.0633 (3) | |
| C11 | 0.1179 (6) | −0.0851 (9) | −0.1269 (3) | 0.0588 (16) | |
| H11A | 0.0957 | −0.2100 | −0.1433 | 0.071* | |
| H11B | 0.0410 | −0.0206 | −0.1207 | 0.071* | |
| C12 | 0.1797 (6) | 0.0105 (11) | −0.1899 (4) | 0.0712 (19) | |
| H12A | 0.1870 | 0.1411 | −0.1780 | 0.085* | |
| H12B | 0.1251 | −0.0022 | −0.2384 | 0.085* | |
| C13 | 0.3099 (7) | −0.0640 (12) | −0.1997 (4) | 0.078 (2) | |
| H13 | 0.3411 | 0.0092 | −0.2401 | 0.094* | |
| C14 | 0.3999 (6) | −0.0340 (10) | −0.1255 (4) | 0.0699 (19) | |
| H14A | 0.3940 | 0.0930 | −0.1090 | 0.084* | |
| H14B | 0.4852 | −0.0554 | −0.1353 | 0.084* | |
| C15 | 0.3697 (5) | −0.1675 (8) | −0.0582 (4) | 0.0528 (15) | |
| H15 | 0.4336 | −0.1494 | −0.0133 | 0.063* | |
| C16 | 0.3785 (6) | −0.3676 (8) | −0.0870 (4) | 0.0610 (17) | |
| H16A | 0.4652 | −0.3938 | −0.0924 | 0.073* | |
| H16B | 0.3544 | −0.4505 | −0.0481 | 0.073* | |
| C17 | 0.2984 (7) | −0.4081 (11) | −0.1622 (4) | 0.082 (2) | |
| H17A | 0.2112 | −0.4131 | −0.1538 | 0.099* | |
| H17B | 0.3208 | −0.5285 | −0.1802 | 0.099* | |
| C18 | 0.3119 (8) | −0.2667 (14) | −0.2240 (5) | 0.091 (2) | |
| H18A | 0.2446 | −0.2859 | −0.2661 | 0.110* | |
| H18B | 0.3903 | −0.2900 | −0.2438 | 0.110* | |
| C21 | 0.1449 (5) | −0.2707 (7) | 0.0190 (3) | 0.0452 (13) | |
| H21A | 0.0547 | −0.2558 | 0.0076 | 0.054* | |
| H21B | 0.1655 | −0.3899 | −0.0010 | 0.054* | |
| C22 | 0.1795 (5) | −0.2755 (8) | 0.1068 (3) | 0.0490 (14) | |
| H22 | 0.1706 | −0.1505 | 0.1266 | 0.059* | |
| C23 | 0.0893 (6) | −0.4026 (10) | 0.1427 (4) | 0.0680 (18) | |
| H23A | 0.0046 | −0.3618 | 0.1277 | 0.102* | |
| H23B | 0.1087 | −0.3991 | 0.1978 | 0.102* | |
| H23C | 0.0981 | −0.5265 | 0.1250 | 0.102* | |
| C24 | 0.3154 (6) | −0.3372 (10) | 0.1303 (4) | 0.0708 (19) | |
| H24A | 0.3258 | −0.4603 | 0.1121 | 0.106* | |
| H24B | 0.3350 | −0.3345 | 0.1854 | 0.106* | |
| H24C | 0.3707 | −0.2554 | 0.1080 | 0.106* |
| P | 0.0394 (8) | 0.0373 (7) | 0.0482 (8) | −0.0002 (6) | 0.0044 (6) | −0.0054 (6) |
| Se | 0.0709 (5) | 0.0383 (4) | 0.0804 (5) | −0.0015 (3) | 0.0100 (3) | −0.0152 (3) |
| C11 | 0.056 (4) | 0.061 (4) | 0.057 (4) | 0.000 (3) | 0.002 (3) | 0.007 (3) |
| C12 | 0.062 (4) | 0.085 (5) | 0.063 (4) | −0.003 (4) | −0.001 (3) | 0.022 (4) |
| C13 | 0.067 (5) | 0.105 (7) | 0.060 (4) | −0.018 (4) | 0.001 (3) | 0.017 (4) |
| C14 | 0.062 (4) | 0.074 (5) | 0.077 (5) | −0.013 (3) | 0.020 (4) | −0.006 (4) |
| C15 | 0.039 (3) | 0.054 (4) | 0.065 (4) | −0.005 (3) | 0.006 (3) | −0.014 (3) |
| C16 | 0.055 (4) | 0.047 (4) | 0.083 (5) | 0.008 (3) | 0.018 (3) | −0.010 (3) |
| C17 | 0.091 (6) | 0.080 (5) | 0.078 (5) | −0.010 (4) | 0.019 (4) | −0.032 (4) |
| C18 | 0.093 (6) | 0.108 (7) | 0.075 (5) | −0.014 (5) | 0.020 (4) | −0.018 (5) |
| C21 | 0.047 (3) | 0.036 (3) | 0.052 (3) | 0.001 (2) | 0.008 (3) | −0.003 (2) |
| C22 | 0.056 (4) | 0.042 (3) | 0.049 (3) | 0.000 (3) | 0.009 (3) | −0.004 (3) |
| C23 | 0.073 (5) | 0.063 (4) | 0.073 (4) | −0.001 (4) | 0.027 (4) | 0.010 (3) |
| C24 | 0.068 (4) | 0.078 (5) | 0.062 (4) | −0.008 (4) | −0.009 (3) | 0.013 (4) |
| P—C15 | 1.822 (6) | C16—H16A | 0.9700 |
| P—C21 | 1.825 (6) | C16—H16B | 0.9700 |
| P—C11 | 1.835 (6) | C17—C18 | 1.514 (12) |
| P—Se | 2.1360 (16) | C17—H17A | 0.9700 |
| C11—C12 | 1.531 (9) | C17—H17B | 0.9700 |
| C11—H11A | 0.9700 | C18—H18A | 0.9700 |
| C11—H11B | 0.9700 | C18—H18B | 0.9700 |
| C12—C13 | 1.534 (10) | C21—C22 | 1.533 (8) |
| C12—H12A | 0.9700 | C21—H21A | 0.9700 |
| C12—H12B | 0.9700 | C21—H21B | 0.9700 |
| C13—C14 | 1.527 (9) | C22—C24 | 1.530 (9) |
| C13—C18 | 1.532 (12) | C22—C23 | 1.536 (8) |
| C13—H13 | 0.9800 | C22—H22 | 0.9800 |
| C14—C15 | 1.594 (9) | C23—H23A | 0.9600 |
| C14—H14A | 0.9700 | C23—H23B | 0.9600 |
| C14—H14B | 0.9700 | C23—H23C | 0.9600 |
| C15—C16 | 1.544 (8) | C24—H24A | 0.9600 |
| C15—H15 | 0.9800 | C24—H24B | 0.9600 |
| C16—C17 | 1.501 (9) | C24—H24C | 0.9600 |
| C15—P—C21 | 112.0 (3) | C17—C16—H16B | 108.6 |
| C15—P—C11 | 103.6 (3) | C15—C16—H16B | 108.6 |
| C21—P—C11 | 103.3 (3) | H16A—C16—H16B | 107.6 |
| C15—P—Se | 111.27 (19) | C16—C17—C18 | 113.3 (6) |
| C21—P—Se | 113.12 (19) | C16—C17—H17A | 108.9 |
| C11—P—Se | 112.9 (2) | C18—C17—H17A | 108.9 |
| C12—C11—P | 113.3 (4) | C16—C17—H17B | 108.9 |
| C12—C11—H11A | 108.9 | C18—C17—H17B | 108.9 |
| P—C11—H11A | 108.9 | H17A—C17—H17B | 107.7 |
| C12—C11—H11B | 108.9 | C17—C18—C13 | 116.4 (6) |
| P—C11—H11B | 108.9 | C17—C18—H18A | 108.2 |
| H11A—C11—H11B | 107.7 | C13—C18—H18A | 108.2 |
| C11—C12—C13 | 114.6 (6) | C17—C18—H18B | 108.2 |
| C11—C12—H12A | 108.6 | C13—C18—H18B | 108.2 |
| C13—C12—H12A | 108.6 | H18A—C18—H18B | 107.3 |
| C11—C12—H12B | 108.6 | C22—C21—P | 117.4 (4) |
| C13—C12—H12B | 108.6 | C22—C21—H21A | 107.9 |
| H12A—C12—H12B | 107.6 | P—C21—H21A | 107.9 |
| C14—C13—C18 | 110.0 (7) | C22—C21—H21B | 107.9 |
| C14—C13—C12 | 109.6 (6) | P—C21—H21B | 107.9 |
| C18—C13—C12 | 114.7 (6) | H21A—C21—H21B | 107.2 |
| C14—C13—H13 | 107.4 | C24—C22—C21 | 111.5 (5) |
| C18—C13—H13 | 107.4 | C24—C22—C23 | 110.5 (5) |
| C12—C13—H13 | 107.4 | C21—C22—C23 | 110.1 (5) |
| C13—C14—C15 | 112.0 (5) | C24—C22—H22 | 108.2 |
| C13—C14—H14A | 109.2 | C21—C22—H22 | 108.2 |
| C15—C14—H14A | 109.2 | C23—C22—H22 | 108.2 |
| C13—C14—H14B | 109.2 | C22—C23—H23A | 109.5 |
| C15—C14—H14B | 109.2 | C22—C23—H23B | 109.5 |
| H14A—C14—H14B | 107.9 | H23A—C23—H23B | 109.5 |
| C16—C15—C14 | 107.5 (5) | C22—C23—H23C | 109.5 |
| C16—C15—P | 116.8 (4) | H23A—C23—H23C | 109.5 |
| C14—C15—P | 106.0 (4) | H23B—C23—H23C | 109.5 |
| C16—C15—H15 | 108.7 | C22—C24—H24A | 109.5 |
| C14—C15—H15 | 108.7 | C22—C24—H24B | 109.5 |
| P—C15—H15 | 108.7 | H24A—C24—H24B | 109.5 |
| C17—C16—C15 | 114.7 (6) | C22—C24—H24C | 109.5 |
| C17—C16—H16A | 108.6 | H24A—C24—H24C | 109.5 |
| C15—C16—H16A | 108.6 | H24B—C24—H24C | 109.5 |
| C15—P—C11—C12 | −45.9 (6) | C11—P—C15—C14 | 50.9 (4) |
| C21—P—C11—C12 | −162.9 (5) | Se—P—C15—C14 | −70.7 (4) |
| Se—P—C11—C12 | 74.6 (5) | C14—C15—C16—C17 | −54.2 (7) |
| P—C11—C12—C13 | 52.2 (8) | P—C15—C16—C17 | 64.7 (7) |
| C11—C12—C13—C14 | −62.0 (8) | C15—C16—C17—C18 | 48.6 (9) |
| C11—C12—C13—C18 | 62.3 (8) | C16—C17—C18—C13 | −45.1 (10) |
| C18—C13—C14—C15 | −55.5 (8) | C14—C13—C18—C17 | 48.8 (9) |
| C12—C13—C14—C15 | 71.5 (8) | C12—C13—C18—C17 | −75.3 (8) |
| C13—C14—C15—C16 | 58.2 (7) | C15—P—C21—C22 | 87.0 (5) |
| C13—C14—C15—P | −67.5 (6) | C11—P—C21—C22 | −162.1 (4) |
| C21—P—C15—C16 | 41.8 (6) | Se—P—C21—C22 | −39.8 (5) |
| C11—P—C15—C16 | −68.9 (5) | P—C21—C22—C24 | −69.3 (6) |
| Se—P—C15—C16 | 169.6 (4) | P—C21—C22—C23 | 167.7 (4) |
| C21—P—C15—C14 | 161.6 (4) |
| P | Se—P | 1 |
| PMe3i | 2.111 (3) | 684 |
| PCy3ii | 2.108 (1) | 676 |
| VCH-iBuiii | 2.1360 (16) | 672,687 |
| Phoban-Phiv | 2.1090 (9) | 689,717 |
| PPhCy2v | 2.1260 (8) | 701 |
| P(o-Tol)3vi | 2.116 (5) | 708 |
| PPh2Cyv | 2.111 (2) | 725 |
| PPh3vii | 2.106 (1) | 733 |
| P(NMe2)3viii | 2.120 (1) | 797 |
X-ray and spectroscopic data (Å, Hz) for selected phosphine selenides.
| P | Se—P | 1 |
|---|---|---|
| PMe3i | 2.111 (3) | 684 |
| PCy3ii | 2.108 (1) | 676 |
| VCH-iBuiii | 2.1360 (16) | 672, 687 |
| Phoban-Phiv | 2.1090 (9) | 689, 717 |
| PPhCy2v | 2.1260 (8) | 701 |
| P( | 2.116 (5) | 708 |
| PPh2Cyv | 2.111 (2) | 725 |
| PPh3vii | 2.106 (1) | 733 |
| P(NMe2)3viii | 2.120 (1) | 797 |
Notes: (i) Cogne et al. (1980 ▶); (ii) Davies et al. (1991 ▶); (iii) this work; (iv) Bungu & Otto (2007b ▶); (v) Muller et al. (2008 ▶); (vi) Cameron & Dahlen (1975 ▶); (vii) Codding & Kerr (1979 ▶); (viii) Rømming & Songstad (1979 ▶).