Literature DB >> 21582209

2-[6,8-Dibromo-3-(4-hydroxy-cyclo-hexyl)-1,2,3,4-tetra-hydro-quinazolin-2-yl]-6-methoxy-phenol.

Zhi-Gang Wang, Rong Wang, Yi Zhang, Feng Zhi, Yi-Lin Yang.   

Abstract

The title compound, C(21)H(24)Br(2)N(2)O(3), was synthesized by the condensation reaction of 3-methoxy-salicylaldehyde with 4-(2-amino-3,5-dibromo-benzyl-amino)cyclo-hexa-nol in a methanol solution. The dihedral angle between the two benzene rings is 76.4 (3)°. The cyclo-hexyl ring adopts a chair configuration. There is an intra-molecular O-H⋯N hydrogen bond which affects the solid state conformation of the mol-ecule. The crystal structure is stabilized by inter-molecular O-H⋯O hydrogen bonds, forming chains running along the b axis.

Entities:  

Year:  2009        PMID: 21582209      PMCID: PMC2968568          DOI: 10.1107/S1600536809005182

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of the pharmaceutical uses of the closely related compound ambroxol, systematic name 4-(2-amino-3,5-di­bromo­benzyl­amino)cyclo­hexa­nol, see: Felix et al. (2008 ▶); Gaida et al. (2005 ▶); Lee et al. (2004 ▶). For bond length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C21H24Br2N2O3 M = 512.24 Triclinic, a = 8.695 (2) Å b = 11.124 (3) Å c = 12.090 (2) Å α = 73.870 (3)° β = 78.226 (3)° γ = 67.031 (2)° V = 1028.2 (4) Å3 Z = 2 Mo Kα radiation μ = 3.97 mm−1 T = 298 K 0.30 × 0.30 × 0.30 mm

Data collection

Bruker SMART CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.382, T max = 0.382 (expected range = 0.304–0.304) 8514 measured reflections 4305 independent reflections 3035 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.096 S = 1.02 4305 reflections 256 parameters H-atom parameters constrained Δρmax = 0.51 e Å−3 Δρmin = −0.41 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809005182/sj2575sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005182/sj2575Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H24Br2N2O3Z = 2
Mr = 512.24F(000) = 516
Triclinic, P1Dx = 1.655 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.695 (2) ÅCell parameters from 2079 reflections
b = 11.124 (3) Åθ = 2.3–24.6°
c = 12.090 (2) ŵ = 3.97 mm1
α = 73.870 (3)°T = 298 K
β = 78.226 (3)°Block, colorless
γ = 67.031 (2)°0.30 × 0.30 × 0.30 mm
V = 1028.2 (4) Å3
Bruker SMART CCD area detector diffractometer4305 independent reflections
Radiation source: fine-focus sealed tube3035 reflections with I > 2σ(I)
graphiteRint = 0.032
ω scansθmax = 27.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→10
Tmin = 0.382, Tmax = 0.382k = −14→14
8514 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.096H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0423P)2 + 0.0168P] where P = (Fo2 + 2Fc2)/3
4305 reflections(Δ/σ)max = 0.001
256 parametersΔρmax = 0.51 e Å3
0 restraintsΔρmin = −0.41 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br11.17738 (5)0.24247 (4)0.32321 (4)0.04726 (14)
Br21.28346 (5)0.54977 (4)0.58131 (3)0.04402 (14)
O10.2331 (3)0.9422 (3)0.3052 (2)0.0418 (7)
H10.15810.98830.26350.063*
O20.9413 (3)0.8807 (3)−0.1082 (2)0.0430 (7)
H20.89610.8692−0.04160.065*
O31.1435 (4)0.9116 (3)−0.2940 (2)0.0510 (7)
N11.0518 (4)0.5182 (3)0.1542 (2)0.0305 (7)
H1A1.05270.44320.14690.037*
N20.9133 (3)0.7617 (3)0.1103 (2)0.0249 (6)
C11.1053 (4)0.6460 (3)0.2638 (3)0.0265 (8)
C21.1080 (4)0.5243 (3)0.2507 (3)0.0263 (7)
C31.1674 (4)0.4110 (3)0.3381 (3)0.0287 (8)
C41.2199 (4)0.4172 (3)0.4357 (3)0.0317 (8)
H41.25860.34050.49310.038*
C51.2143 (4)0.5386 (4)0.4468 (3)0.0302 (8)
C61.1591 (4)0.6523 (3)0.3620 (3)0.0306 (8)
H61.15760.73340.37020.037*
C71.0414 (4)0.7698 (3)0.1692 (3)0.0259 (7)
H7A0.99290.84810.20270.031*
H7B1.13490.77990.11280.031*
C80.7481 (4)0.7705 (3)0.1797 (3)0.0269 (8)
H80.75600.68120.22630.032*
C90.6954 (4)0.8659 (4)0.2601 (3)0.0377 (9)
H9A0.69770.95250.21560.045*
H9B0.77510.83240.31680.045*
C100.5210 (5)0.8823 (4)0.3222 (3)0.0410 (10)
H10A0.52130.79730.37220.049*
H10B0.49080.94640.37050.049*
C110.3920 (4)0.9293 (3)0.2392 (3)0.0322 (8)
H110.38801.01750.19180.039*
C120.4406 (4)0.8330 (4)0.1607 (3)0.0414 (10)
H12A0.36000.86620.10450.050*
H12B0.43800.74680.20620.050*
C130.6155 (4)0.8160 (4)0.0976 (3)0.0378 (9)
H13A0.64520.75090.05040.045*
H13B0.61430.90060.04630.045*
C140.9912 (4)0.6381 (3)0.0655 (3)0.0255 (7)
H140.90300.62890.03290.031*
C151.1251 (4)0.6565 (4)−0.0355 (3)0.0296 (8)
C161.0875 (4)0.7752 (4)−0.1185 (3)0.0298 (8)
C171.1986 (5)0.7917 (4)−0.2178 (3)0.0367 (9)
C181.3514 (5)0.6900 (5)−0.2301 (3)0.0454 (11)
H181.42740.7007−0.29510.055*
C191.3921 (5)0.5718 (4)−0.1457 (4)0.0476 (11)
H191.49540.5038−0.15410.057*
C201.2793 (4)0.5554 (4)−0.0496 (3)0.0368 (9)
H201.30680.47590.00630.044*
C211.2282 (7)0.9219 (5)−0.4076 (3)0.0797 (17)
H21A1.34180.9132−0.40480.120*
H21B1.17151.0074−0.45490.120*
H21C1.22880.8521−0.44000.120*
U11U22U33U12U13U23
Br10.0577 (3)0.0246 (2)0.0575 (3)−0.00942 (19)−0.0134 (2)−0.00831 (19)
Br20.0490 (3)0.0547 (3)0.0320 (2)−0.0205 (2)−0.01256 (18)−0.00628 (18)
O10.0277 (14)0.0408 (16)0.0439 (16)−0.0053 (13)0.0025 (12)−0.0038 (13)
O20.0370 (16)0.0440 (16)0.0302 (14)−0.0040 (13)0.0040 (12)−0.0011 (12)
O30.0602 (19)0.0570 (18)0.0303 (15)−0.0259 (16)0.0092 (13)−0.0038 (14)
N10.0405 (18)0.0227 (15)0.0294 (16)−0.0106 (14)−0.0055 (14)−0.0073 (13)
N20.0216 (15)0.0262 (15)0.0263 (15)−0.0077 (12)−0.0019 (12)−0.0068 (12)
C10.0208 (18)0.0288 (19)0.0291 (18)−0.0088 (15)−0.0031 (15)−0.0048 (15)
C20.0186 (18)0.0276 (18)0.0313 (19)−0.0066 (15)0.0006 (14)−0.0094 (15)
C30.028 (2)0.0219 (18)0.036 (2)−0.0074 (16)−0.0032 (16)−0.0082 (16)
C40.027 (2)0.029 (2)0.031 (2)−0.0038 (17)−0.0074 (16)−0.0005 (16)
C50.0239 (19)0.039 (2)0.0297 (19)−0.0106 (17)−0.0051 (15)−0.0097 (17)
C60.0249 (19)0.032 (2)0.037 (2)−0.0127 (16)0.0005 (16)−0.0098 (17)
C70.0232 (18)0.0268 (18)0.0297 (18)−0.0096 (15)−0.0042 (15)−0.0073 (15)
C80.0257 (19)0.0221 (17)0.0311 (19)−0.0081 (15)−0.0016 (15)−0.0047 (15)
C90.030 (2)0.048 (2)0.035 (2)−0.0078 (18)−0.0039 (17)−0.0168 (18)
C100.036 (2)0.048 (2)0.032 (2)−0.0031 (19)−0.0032 (18)−0.0155 (18)
C110.028 (2)0.0266 (19)0.036 (2)−0.0076 (16)0.0033 (16)−0.0049 (16)
C120.027 (2)0.050 (2)0.050 (2)−0.0111 (19)−0.0040 (18)−0.018 (2)
C130.027 (2)0.054 (3)0.039 (2)−0.0119 (19)−0.0026 (17)−0.0247 (19)
C140.0221 (18)0.0295 (19)0.0270 (18)−0.0080 (15)−0.0046 (14)−0.0098 (15)
C150.027 (2)0.039 (2)0.0253 (18)−0.0134 (17)−0.0032 (15)−0.0096 (16)
C160.025 (2)0.037 (2)0.0259 (18)−0.0096 (17)−0.0037 (15)−0.0072 (16)
C170.038 (2)0.049 (2)0.028 (2)−0.020 (2)0.0007 (17)−0.0109 (18)
C180.035 (2)0.073 (3)0.037 (2)−0.026 (2)0.0066 (19)−0.024 (2)
C190.026 (2)0.062 (3)0.054 (3)−0.003 (2)−0.001 (2)−0.032 (2)
C200.026 (2)0.042 (2)0.041 (2)−0.0053 (18)−0.0057 (17)−0.0149 (18)
C210.131 (5)0.086 (4)0.029 (2)−0.063 (4)0.027 (3)−0.013 (2)
Br1—C31.900 (3)C9—C101.514 (5)
Br2—C51.895 (3)C9—H9A0.9700
O1—C111.423 (4)C9—H9B0.9700
O1—H10.8200C10—C111.499 (5)
O2—C161.364 (4)C10—H10A0.9700
O2—H20.8200C10—H10B0.9700
O3—C171.363 (4)C11—C121.509 (5)
O3—C211.416 (4)C11—H110.9800
N1—C21.381 (4)C12—C131.520 (5)
N1—C141.448 (4)C12—H12A0.9700
N1—H1A0.8600C12—H12B0.9700
N2—C141.476 (4)C13—H13A0.9700
N2—C71.482 (4)C13—H13B0.9700
N2—C81.490 (4)C14—C151.535 (4)
C1—C61.389 (4)C14—H140.9800
C1—C21.396 (4)C15—C161.385 (5)
C1—C71.517 (4)C15—C201.388 (5)
C2—C31.395 (5)C16—C171.397 (5)
C3—C41.376 (4)C17—C181.381 (5)
C4—C51.376 (5)C18—C191.391 (6)
C4—H40.9300C18—H180.9300
C5—C61.374 (5)C19—C201.379 (5)
C6—H60.9300C19—H190.9300
C7—H7A0.9700C20—H200.9300
C7—H7B0.9700C21—H21A0.9600
C8—C91.513 (5)C21—H21B0.9600
C8—C131.518 (4)C21—H21C0.9600
C8—H80.9800
C11—O1—H1109.5H10A—C10—H10B107.9
C16—O2—H2109.5O1—C11—C10107.9 (3)
C17—O3—C21117.3 (3)O1—C11—C12112.8 (3)
C2—N1—C14120.0 (3)C10—C11—C12109.8 (3)
C2—N1—H1A120.0O1—C11—H11108.8
C14—N1—H1A120.0C10—C11—H11108.8
C14—N2—C7107.0 (2)C12—C11—H11108.8
C14—N2—C8112.1 (2)C11—C12—C13110.9 (3)
C7—N2—C8116.3 (2)C11—C12—H12A109.5
C6—C1—C2120.2 (3)C13—C12—H12A109.5
C6—C1—C7121.4 (3)C11—C12—H12B109.5
C2—C1—C7118.4 (3)C13—C12—H12B109.5
N1—C2—C3121.7 (3)H12A—C12—H12B108.1
N1—C2—C1120.4 (3)C8—C13—C12112.7 (3)
C3—C2—C1118.0 (3)C8—C13—H13A109.1
C4—C3—C2121.9 (3)C12—C13—H13A109.1
C4—C3—Br1118.5 (3)C8—C13—H13B109.1
C2—C3—Br1119.6 (3)C12—C13—H13B109.1
C5—C4—C3118.9 (3)H13A—C13—H13B107.8
C5—C4—H4120.6N1—C14—N2113.6 (3)
C3—C4—H4120.6N1—C14—C15113.8 (3)
C6—C5—C4121.1 (3)N2—C14—C15109.0 (3)
C6—C5—Br2119.3 (3)N1—C14—H14106.7
C4—C5—Br2119.6 (3)N2—C14—H14106.7
C5—C6—C1119.9 (3)C15—C14—H14106.7
C5—C6—H6120.0C16—C15—C20118.9 (3)
C1—C6—H6120.0C16—C15—C14118.9 (3)
N2—C7—C1111.6 (3)C20—C15—C14122.1 (3)
N2—C7—H7A109.3O2—C16—C15122.2 (3)
C1—C7—H7A109.3O2—C16—C17116.8 (3)
N2—C7—H7B109.3C15—C16—C17121.0 (3)
C1—C7—H7B109.3O3—C17—C18126.0 (3)
H7A—C7—H7B108.0O3—C17—C16114.9 (3)
N2—C8—C9112.9 (3)C18—C17—C16119.1 (4)
N2—C8—C13108.8 (3)C17—C18—C19120.2 (4)
C9—C8—C13109.3 (3)C17—C18—H18119.9
N2—C8—H8108.6C19—C18—H18119.9
C9—C8—H8108.6C20—C19—C18120.1 (4)
C13—C8—H8108.6C20—C19—H19120.0
C8—C9—C10112.0 (3)C18—C19—H19120.0
C8—C9—H9A109.2C19—C20—C15120.6 (4)
C10—C9—H9A109.2C19—C20—H20119.7
C8—C9—H9B109.2C15—C20—H20119.7
C10—C9—H9B109.2O3—C21—H21A109.5
H9A—C9—H9B107.9O3—C21—H21B109.5
C11—C10—C9112.0 (3)H21A—C21—H21B109.5
C11—C10—H10A109.2O3—C21—H21C109.5
C9—C10—H10A109.2H21A—C21—H21C109.5
C11—C10—H10B109.2H21B—C21—H21C109.5
C9—C10—H10B109.2
D—H···AD—HH···AD···AD—H···A
O2—H2···N20.821.892.614 (3)147
O1—H1···O3i0.822.413.048 (4)135
O1—H1···O2i0.822.132.897 (4)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯N20.821.892.614 (3)147
O1—H1⋯O3i0.822.413.048 (4)135
O1—H1⋯O2i0.822.132.897 (4)155

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Flow injection analysis using carbon film resistor electrodes for amperometric determination of ambroxol.

Authors:  Fabiana S Felix; Christopher M A Brett; Lúcio Angnes
Journal:  Talanta       Date:  2008-02-19       Impact factor: 6.057

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4.  Bioequivalence assessment of ambroxol tablet after a single oral dose administration to healthy male volunteers.

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Journal:  Pharmacol Res       Date:  2004-01       Impact factor: 7.658

  4 in total
  4 in total

1.  2-[6,8-Dibromo-3-(4-hy-droxy-cyclo-hex-yl)-1,2,3,4-tetra-hydro-quinazolin-2-yl]phenol methanol 0.25-solvate.

Authors:  Zhi-Gang Wang; Rong Wang; Feng Zhi; Ming-Li Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-09

2.  4-[6,8-Dibromo-2-(2-chloro-5-nitro-phen-yl)-1,2,3,4-tetra-hydro-quinazolin-3-yl]cyclo-hexa-nol.

Authors:  Zhi-Gang Wang; Zong-Lin Xia; Rong Wang; Ming-Li Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-28

3.  Experimental and theoretical investigations into the stability of cyclic aminals.

Authors:  Edgar Sawatzky; Antonios Drakopoulos; Martin Rölz; Christoph Sotriffer; Bernd Engels; Michael Decker
Journal:  Beilstein J Org Chem       Date:  2016-10-31       Impact factor: 2.883

Review 4.  Association Between MTHFR Polymorphisms and the Risk of Essential Hypertension: An Updated Meta-analysis.

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Journal:  Front Genet       Date:  2021-11-26       Impact factor: 4.599

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