Literature DB >> 21582099

Poly[[di-μ(3)-nicotinato-hemi-μ(4)-oxalato-hemi-μ(2)-oxalato-neodymium(III)silver(I)] dihydrate].

Xiao-Yan Nie1, Qian-Zhu Li.   

Abstract

The asymmetric unit of the title compound, {[AgNd(C(6)H(4)NO(2))(2)(C(2)O(4))]·2H(2)O}(n), contains one Nd(III) atom, one Ag(I) atom, one oxalate ligand, two nicotinate ligands and two uncoordinated water mol-ecules. The Nd(III) atom is eight-coordinated in a distorted square-anti-prismatic coordination geometry by four O atoms from two oxalate ligands and four O atoms from four nicotinate ligands. The Ag(I) atom has a T-shaped configuration, defined by two N atoms from two nicotinate ligands and one O atom from one oxalate ligand. The nicotinate and oxalate ligands link the Nd and Ag atoms into a three-dimensional coordination framework. O-H⋯O and O-H⋯N hydrogen bonds donated by water mol-ecules are observed in the crystal.

Entities:  

Year:  2009        PMID: 21582099      PMCID: PMC2968511          DOI: 10.1107/S1600536809005947

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Barbour (2006 ▶); Cheng et al. (2007a ▶,b ▶); Kepert (2006 ▶); Kong et al. (2008 ▶); Luo et al. (2006 ▶, 2007 ▶); Rao et al. (2004 ▶); Zhang et al. (2005 ▶). For related structures, see: Arnold et al. (1997 ▶); Hartshorn & Steel (1996 ▶); Song & Mao (2005 ▶).

Experimental

Crystal data

[AgNd(C6H4NO2)2(C2O4)]·2H2O M = 620.37 Monoclinic, a = 9.7441 (1) Å b = 22.4015 (4) Å c = 9.2050 (1) Å β = 116.992 (1)° V = 1790.42 (4) Å3 Z = 4 Mo Kα radiation μ = 4.02 mm−1 T = 296 K 0.30 × 0.25 × 0.21 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.317, T max = 0.439 13299 measured reflections 3202 independent reflections 2645 reflections with I > 2σ(I) R int = 0.058

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.072 S = 1.05 3202 reflections 253 parameters 6 restraints H-atom parameters constrained Δρmax = 1.05 e Å−3 Δρmin = −0.74 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg & Putz, 1999 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809005947/hy2180sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005947/hy2180Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[AgNd(C6H4NO2)2(C2O4)]·2H2OF(000) = 1188
Mr = 620.37Dx = 2.301 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5837 reflections
a = 9.7441 (1) Åθ = 2.8–27.9°
b = 22.4015 (4) ŵ = 4.02 mm1
c = 9.2050 (1) ÅT = 296 K
β = 116.992 (1)°Block, pale-purple
V = 1790.42 (4) Å30.30 × 0.25 × 0.21 mm
Z = 4
Bruker APEXII CCD diffractometer3202 independent reflections
Radiation source: fine-focus sealed tube2645 reflections with I > 2σ(I)
graphiteRint = 0.058
φ and ω scansθmax = 25.2°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→11
Tmin = 0.317, Tmax = 0.439k = −26→26
13299 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.072H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0246P)2 + 1.8836P] where P = (Fo2 + 2Fc2)/3
3202 reflections(Δ/σ)max < 0.001
253 parametersΔρmax = 1.05 e Å3
6 restraintsΔρmin = −0.74 e Å3
xyzUiso*/Ueq
Ag10.17888 (6)0.14737 (2)0.01878 (7)0.05145 (17)
C10.3858 (6)−0.0646 (2)0.9171 (6)0.0253 (11)
N10.6264 (5)−0.1161 (2)1.0156 (6)0.0364 (11)
Nd10.14173 (3)0.008872 (12)0.38289 (3)0.01977 (10)
O10.2914 (4)−0.00473 (16)0.6779 (4)0.0309 (9)
O1W0.3918 (8)0.1959 (3)0.4391 (7)0.098 (2)
H1W0.40950.20810.36290.147*
H2W0.39070.15850.43840.147*
C20.5159 (6)−0.0809 (2)0.9055 (7)0.0320 (13)
H20.5286−0.06710.81720.038*
N20.0364 (5)0.2168 (2)0.0474 (6)0.0367 (11)
O20.1337 (4)−0.02728 (19)0.7871 (4)0.0361 (9)
O2W0.4855 (9)0.7657 (3)0.7785 (9)0.119 (3)
H4W0.53870.74270.85600.178*
H3W0.46830.79740.81590.178*
C30.6065 (7)−0.1347 (3)1.1434 (7)0.0426 (15)
H30.6804−0.15971.21940.051*
O30.1134 (4)0.38638 (16)−0.0591 (5)0.0368 (10)
C40.4824 (7)−0.1187 (3)1.1673 (7)0.0402 (15)
H40.4745−0.13101.25970.048*
O4−0.0282 (5)0.42752 (17)0.0429 (5)0.0371 (9)
C50.3706 (7)−0.0841 (3)1.0515 (7)0.0339 (13)
H50.2838−0.07361.06330.041*
O50.1169 (4)0.05546 (16)0.1296 (4)0.0315 (9)
C60.2600 (6)−0.0288 (2)0.7832 (6)0.0278 (12)
O6−0.0401 (4)0.05896 (15)−0.1370 (4)0.0278 (8)
C7−0.0146 (6)0.3216 (2)0.0401 (6)0.0276 (12)
O70.3853 (4)0.06386 (16)0.4497 (4)0.0278 (8)
C80.0645 (6)0.2733 (2)0.0224 (7)0.0305 (13)
H80.14140.2804−0.00870.037*
O80.6416 (4)0.05526 (16)0.5788 (4)0.0298 (9)
C9−0.0735 (7)0.2077 (3)0.0938 (8)0.0465 (16)
H9−0.09350.16870.11310.056*
C10−0.1580 (8)0.2526 (3)0.1142 (9)0.0530 (18)
H10−0.23420.24410.14550.064*
C11−0.1288 (7)0.3105 (3)0.0878 (7)0.0409 (15)
H11−0.18440.34190.10170.049*
C120.0257 (6)0.3829 (2)0.0058 (6)0.0265 (12)
C130.0207 (6)0.0329 (2)−0.0029 (6)0.0246 (11)
C140.5076 (6)0.0349 (2)0.5090 (6)0.0224 (11)
U11U22U33U12U13U23
Ag10.0384 (3)0.0263 (3)0.0940 (4)0.0076 (2)0.0339 (3)0.0094 (2)
C10.021 (3)0.024 (3)0.028 (3)0.002 (2)0.008 (2)−0.002 (2)
N10.028 (3)0.034 (3)0.046 (3)0.005 (2)0.016 (2)0.006 (2)
Nd10.01772 (16)0.02063 (17)0.02011 (15)0.00101 (11)0.00786 (12)0.00165 (11)
O10.028 (2)0.038 (2)0.0226 (19)0.0006 (17)0.0074 (17)0.0061 (16)
O1W0.122 (6)0.076 (4)0.107 (5)−0.015 (4)0.060 (5)0.011 (4)
C20.032 (3)0.030 (3)0.039 (3)0.006 (3)0.020 (3)0.010 (3)
N20.033 (3)0.023 (3)0.053 (3)0.000 (2)0.019 (3)0.004 (2)
O20.021 (2)0.056 (3)0.029 (2)0.0094 (19)0.0094 (18)0.0049 (18)
O2W0.162 (7)0.076 (5)0.122 (6)−0.005 (5)0.067 (6)−0.004 (4)
C30.037 (4)0.041 (4)0.038 (4)0.011 (3)0.007 (3)0.015 (3)
O30.038 (2)0.025 (2)0.059 (3)−0.0018 (18)0.031 (2)0.0047 (18)
C40.054 (4)0.041 (4)0.025 (3)0.007 (3)0.017 (3)0.009 (3)
O40.045 (2)0.026 (2)0.037 (2)0.0057 (19)0.015 (2)−0.0050 (17)
C50.031 (3)0.040 (4)0.034 (3)0.003 (3)0.018 (3)0.000 (3)
O50.035 (2)0.033 (2)0.0225 (19)−0.0102 (18)0.0096 (18)−0.0002 (16)
C60.022 (3)0.027 (3)0.028 (3)0.003 (2)0.005 (3)−0.005 (2)
O60.031 (2)0.024 (2)0.0236 (19)0.0007 (16)0.0081 (17)0.0009 (15)
C70.028 (3)0.022 (3)0.036 (3)−0.002 (2)0.017 (3)−0.001 (2)
O70.022 (2)0.025 (2)0.036 (2)0.0043 (16)0.0123 (18)0.0038 (16)
C80.025 (3)0.026 (3)0.045 (3)0.001 (2)0.019 (3)0.003 (2)
O80.017 (2)0.030 (2)0.037 (2)−0.0010 (16)0.0078 (18)−0.0072 (16)
C90.047 (4)0.030 (4)0.068 (5)−0.009 (3)0.031 (4)0.009 (3)
C100.052 (4)0.048 (4)0.077 (5)−0.001 (3)0.046 (4)0.011 (4)
C110.039 (4)0.037 (4)0.054 (4)0.004 (3)0.028 (3)0.003 (3)
C120.024 (3)0.024 (3)0.025 (3)0.006 (2)0.006 (3)0.000 (2)
C130.025 (3)0.026 (3)0.027 (3)0.001 (2)0.015 (3)−0.002 (2)
C140.024 (3)0.032 (3)0.016 (2)0.003 (2)0.012 (2)0.001 (2)
Ag1—N1i2.176 (5)O2W—H3W0.8400
Ag1—N22.180 (5)C3—C41.371 (8)
Ag1—O52.491 (3)C3—H30.9300
C1—C21.369 (7)O3—C121.247 (6)
C1—C51.382 (7)C4—C51.368 (8)
C1—C61.514 (7)C4—H40.9300
N1—C31.343 (7)O4—C121.247 (6)
N1—C21.348 (7)C5—H50.9300
Nd1—O4ii2.387 (4)O5—C131.259 (6)
Nd1—O8i2.443 (3)O6—C131.246 (6)
Nd1—O12.449 (4)C7—C81.382 (7)
Nd1—O3iii2.450 (4)C7—C111.391 (7)
Nd1—O2iv2.451 (4)C7—C121.501 (7)
Nd1—O52.464 (3)O7—C141.244 (6)
Nd1—O72.491 (3)C8—H80.9300
Nd1—O6v2.525 (3)O8—C141.251 (6)
O1—C61.262 (6)C9—C101.366 (9)
O1W—H1W0.8400C9—H90.9300
O1W—H2W0.8400C10—C111.374 (9)
C2—H20.9300C10—H100.9300
N2—C91.336 (7)C11—H110.9300
N2—C81.336 (7)C13—C13v1.536 (11)
O2—C61.248 (6)C14—C14i1.572 (11)
O2W—H4W0.8400
N1i—Ag1—N2153.22 (18)H4W—O2W—H3W109.4
N1i—Ag1—O5100.53 (15)N1—C3—C4123.2 (5)
N2—Ag1—O5104.74 (15)N1—C3—H3118.4
C2—C1—C5117.7 (5)C4—C3—H3118.4
C2—C1—C6120.9 (5)C12—O3—Nd1vi109.5 (3)
C5—C1—C6121.3 (5)C5—C4—C3118.2 (5)
C3—N1—C2117.2 (5)C5—C4—H4120.9
C3—N1—Ag1i120.6 (4)C3—C4—H4120.9
C2—N1—Ag1i122.1 (4)C12—O4—Nd1vii176.5 (4)
O4ii—Nd1—O8i89.54 (13)C4—C5—C1120.3 (5)
O4ii—Nd1—O173.01 (13)C4—C5—H5119.8
O8i—Nd1—O174.10 (12)C1—C5—H5119.8
O4ii—Nd1—O3iii123.80 (13)C13—O5—Nd1117.2 (3)
O8i—Nd1—O3iii135.02 (12)C13—O5—Ag198.5 (3)
O1—Nd1—O3iii86.96 (13)Nd1—O5—Ag1143.11 (15)
O4ii—Nd1—O2iv78.22 (13)O2—C6—O1126.6 (5)
O8i—Nd1—O2iv144.59 (13)O2—C6—C1115.8 (5)
O1—Nd1—O2iv131.08 (12)O1—C6—C1117.5 (5)
O3iii—Nd1—O2iv77.22 (14)C13—O6—Nd1v115.0 (3)
O4ii—Nd1—O5137.30 (12)C8—C7—C11117.8 (5)
O8i—Nd1—O595.33 (12)C8—C7—C12118.6 (5)
O1—Nd1—O5148.77 (12)C11—C7—C12123.6 (5)
O3iii—Nd1—O580.10 (13)C14—O7—Nd1117.7 (3)
O2iv—Nd1—O573.50 (12)N2—C8—C7123.6 (5)
O4ii—Nd1—O7145.13 (12)N2—C8—H8118.2
O8i—Nd1—O765.86 (12)C7—C8—H8118.2
O1—Nd1—O776.51 (12)C14—O8—Nd1i119.5 (3)
O3iii—Nd1—O770.23 (12)N2—C9—C10123.5 (6)
O2iv—Nd1—O7135.96 (12)N2—C9—H9118.3
O5—Nd1—O772.38 (12)C10—C9—H9118.3
O4ii—Nd1—O6v75.69 (12)C9—C10—C11119.0 (6)
O8i—Nd1—O6v74.76 (11)C9—C10—H10120.5
O1—Nd1—O6v135.45 (12)C11—C10—H10120.5
O3iii—Nd1—O6v137.26 (12)C10—C11—C7119.0 (6)
O2iv—Nd1—O6v70.06 (12)C10—C11—H11120.5
O5—Nd1—O6v64.96 (11)C7—C11—H11120.5
O7—Nd1—O6v117.43 (11)O4—C12—O3123.2 (5)
C6—O1—Nd1132.4 (3)O4—C12—C7119.5 (5)
H1W—O1W—H2W109.0O3—C12—C7117.4 (5)
N1—C2—C1123.4 (5)O6—C13—O5125.6 (5)
N1—C2—H2118.3O6—C13—C13v118.0 (6)
C1—C2—H2118.3O5—C13—C13v116.3 (6)
C9—N2—C8117.2 (5)O7—C14—O8127.1 (5)
C9—N2—Ag1125.2 (4)O7—C14—C14i116.6 (5)
C8—N2—Ag1117.6 (4)O8—C14—C14i116.3 (5)
C6—O2—Nd1iv142.6 (3)
D—H···AD—HH···AD···AD—H···A
O2W—H3W···N1viii0.842.633.308 (9)138
O2W—H4W···O1Wix0.841.992.794 (10)160
O1W—H2W···O70.842.122.962 (7)176
O1W—H1W···O2Wx0.842.072.890 (9)164
Table 1

Selected bond lengths (Å)

Ag1—N1i2.176 (5)
Ag1—N22.180 (5)
Ag1—O52.491 (3)
Nd1—O4ii2.387 (4)
Nd1—O8i2.443 (3)
Nd1—O12.449 (4)
Nd1—O3iii2.450 (4)
Nd1—O2iv2.451 (4)
Nd1—O52.464 (3)
Nd1—O72.491 (3)
Nd1—O6v2.525 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2W—H3W⋯N1vi0.842.633.308 (9)138
O2W—H4W⋯O1Wvii0.841.992.794 (10)160
O1W—H2W⋯O70.842.122.962 (7)176
O1W—H1W⋯O2Wviii0.842.072.890 (9)164

Symmetry codes: (vi) ; (vii) ; (viii) .

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