| Literature DB >> 21582082 |
Manoj Trivedi, Daya Shankar Pandey, Nigam P Rath.
Abstract
In the title compound, [Cu(C(7)H(3)NO(4))(C(5)H(5)N)](n), the Cu(II) atom is in a slightly distorted octa-hedral coordination environment. Each Cu(II) atom is bound to two N atoms and one O atom of the pyridine-dicarboxyl-ate (PDA) ligand in a tridentate manner, one N atom of the pyridine mol-ecule and two bridging carboxyl-ate O atoms of adjacent PDA ligands, leading to a linear one-dimensional chain running along the c axis. These chains are further assembled via weak C-H⋯O and π-π inter-actions into a three-dimensional supra-molecular network structure. The centroid-centroid distance between the π-π inter-acting pyridine rings is 3.9104 (13) Å. The two N atoms are trans to each other with respect to Cu.Entities:
Year: 2009 PMID: 21582082 PMCID: PMC2968654 DOI: 10.1107/S1600536809005212
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C7H3NO4)(C5H5N)] | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 1607 reflections |
| θ = 3.0–25.3° | |
| µ = 2.06 mm−1 | |
| β = 91.687 (4)° | Needle, blue |
| 0.21 × 0.13 × 0.08 mm | |
| Bruker APEXII CCD area-detector diffractometer | 981 independent reflections |
| Radiation source: fine-focus sealed tube | 859 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.3°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 3530 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters not refined | |
| 981 reflections | (Δ/σ)max < 0.001 |
| 89 parameters | Δρmax = 0.41 e Å−3 |
| 0 restraints | Δρmin = −0.60 e Å−3 |
| Experimental. All H atoms were added in their calculated positions and were treated using appropriate riding models. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 0.5000 | 0.06463 (3) | 0.2500 | 0.01055 (18) | |
| O1 | 0.3461 (2) | 0.04164 (13) | 0.08928 (18) | 0.0119 (4) | |
| O2 | 0.2652 (2) | −0.07906 (13) | −0.05100 (19) | 0.0137 (4) | |
| N1 | 0.5000 | 0.2074 (2) | 0.2500 | 0.0099 (7) | |
| N2 | 0.5000 | −0.0746 (2) | 0.2500 | 0.0096 (7) | |
| C1 | 0.3334 (3) | −0.04888 (19) | 0.0526 (3) | 0.0111 (6) | |
| C2 | 0.4161 (3) | −0.1210 (2) | 0.1514 (3) | 0.0100 (6) | |
| C3 | 0.4135 (3) | −0.2221 (2) | 0.1484 (3) | 0.0120 (6) | |
| H3 | 0.3542 | −0.2564 | 0.0789 | 0.014* | |
| C4 | 0.5000 | −0.2728 (3) | 0.2500 | 0.0130 (8) | |
| H4 | 0.5000 | −0.3426 | 0.2500 | 0.016* | |
| C5 | 0.5748 (3) | 0.2583 (2) | 0.3507 (3) | 0.0124 (6) | |
| H5 | 0.6286 | 0.2230 | 0.4218 | 0.015* | |
| C6 | 0.5765 (4) | 0.3594 (2) | 0.3549 (3) | 0.0154 (6) | |
| H6 | 0.6290 | 0.3931 | 0.4281 | 0.018* | |
| C7 | 0.5000 | 0.4112 (3) | 0.2500 | 0.0159 (9) | |
| H7 | 0.5000 | 0.4810 | 0.2500 | 0.019* |
| Cu1 | 0.0144 (3) | 0.0059 (3) | 0.0109 (3) | 0.000 | −0.00649 (18) | 0.000 |
| O1 | 0.0151 (10) | 0.0074 (10) | 0.0129 (10) | −0.0014 (8) | −0.0066 (8) | 0.0000 (8) |
| O2 | 0.0173 (10) | 0.0117 (11) | 0.0118 (10) | −0.0026 (8) | −0.0068 (8) | −0.0017 (8) |
| N1 | 0.0095 (16) | 0.0095 (17) | 0.0108 (17) | 0.000 | −0.0009 (13) | 0.000 |
| N2 | 0.0085 (16) | 0.0102 (17) | 0.0100 (16) | 0.000 | −0.0009 (13) | 0.000 |
| C1 | 0.0114 (14) | 0.0106 (14) | 0.0114 (15) | −0.0017 (11) | −0.0007 (11) | 0.0004 (11) |
| C2 | 0.0080 (13) | 0.0125 (15) | 0.0095 (14) | −0.0020 (11) | −0.0011 (11) | −0.0023 (11) |
| C3 | 0.0122 (14) | 0.0131 (15) | 0.0108 (14) | −0.0006 (11) | −0.0019 (11) | −0.0018 (11) |
| C4 | 0.014 (2) | 0.009 (2) | 0.016 (2) | 0.000 | 0.0001 (16) | 0.000 |
| C5 | 0.0124 (14) | 0.0138 (15) | 0.0110 (15) | 0.0001 (11) | −0.0012 (11) | 0.0007 (11) |
| C6 | 0.0163 (15) | 0.0136 (15) | 0.0163 (16) | −0.0035 (12) | 0.0025 (12) | −0.0042 (12) |
| C7 | 0.016 (2) | 0.009 (2) | 0.023 (2) | 0.000 | 0.0055 (17) | 0.000 |
| Cu1—N2 | 1.896 (3) | C2—C3 | 1.378 (4) |
| Cu1—N1 | 1.944 (3) | C3—C4 | 1.392 (3) |
| Cu1—O1 | 2.0110 (18) | C3—H3 | 0.9500 |
| Cu1—O1i | 2.0110 (18) | C4—C3i | 1.392 (3) |
| O1—C1 | 1.290 (3) | C4—H4 | 0.9500 |
| O2—C1 | 1.228 (3) | C5—C6 | 1.378 (4) |
| N1—C5i | 1.347 (3) | C5—H5 | 0.9500 |
| N1—C5 | 1.347 (3) | C6—C7 | 1.390 (3) |
| N2—C2 | 1.332 (3) | C6—H6 | 0.9500 |
| N2—C2i | 1.332 (3) | C7—C6i | 1.390 (3) |
| C1—C2 | 1.527 (4) | C7—H7 | 0.9500 |
| N2—Cu1—N1 | 180.0 | N2—C2—C1 | 111.7 (2) |
| N2—Cu1—O1 | 81.05 (5) | C3—C2—C1 | 128.5 (2) |
| N1—Cu1—O1 | 98.95 (5) | C2—C3—C4 | 118.2 (3) |
| N2—Cu1—O1i | 81.05 (5) | C2—C3—H3 | 120.9 |
| N1—Cu1—O1i | 98.95 (5) | C4—C3—H3 | 120.9 |
| O1—Cu1—O1i | 162.10 (10) | C3—C4—C3i | 120.6 (4) |
| C1—O1—Cu1 | 114.71 (16) | C3—C4—H4 | 119.7 |
| C5i—N1—C5 | 118.1 (3) | C3i—C4—H4 | 119.7 |
| C5i—N1—Cu1 | 120.97 (16) | N1—C5—C6 | 122.8 (3) |
| C5—N1—Cu1 | 120.96 (16) | N1—C5—H5 | 118.6 |
| C2—N2—C2i | 123.4 (3) | C6—C5—H5 | 118.6 |
| C2—N2—Cu1 | 118.28 (16) | C5—C6—C7 | 118.7 (3) |
| C2i—N2—Cu1 | 118.28 (16) | C5—C6—H6 | 120.7 |
| O2—C1—O1 | 126.2 (2) | C7—C6—H6 | 120.7 |
| O2—C1—C2 | 120.2 (2) | C6i—C7—C6 | 119.0 (4) |
| O1—C1—C2 | 113.6 (2) | C6i—C7—H7 | 120.5 |
| N2—C2—C3 | 119.8 (3) | C6—C7—H7 | 120.5 |
| N2—Cu1—O1—C1 | −6.98 (18) | Cu1—N2—C2—C3 | −179.96 (18) |
| N1—Cu1—O1—C1 | 173.02 (18) | C2i—N2—C2—C1 | −179.7 (2) |
| O1i—Cu1—O1—C1 | −6.98 (18) | Cu1—N2—C2—C1 | 0.3 (2) |
| O1—Cu1—N1—C5i | −6.84 (14) | O2—C1—C2—N2 | 172.9 (2) |
| O1i—Cu1—N1—C5i | 173.16 (14) | O1—C1—C2—N2 | −6.2 (3) |
| O1—Cu1—N1—C5 | 173.16 (14) | O2—C1—C2—C3 | −6.8 (4) |
| O1i—Cu1—N1—C5 | −6.84 (14) | O1—C1—C2—C3 | 174.1 (3) |
| O1—Cu1—N2—C2 | 3.29 (14) | N2—C2—C3—C4 | −0.1 (4) |
| O1i—Cu1—N2—C2 | −176.71 (14) | C1—C2—C3—C4 | 179.6 (2) |
| O1—Cu1—N2—C2i | −176.71 (14) | C2—C3—C4—C3i | 0.03 (18) |
| O1i—Cu1—N2—C2i | 3.29 (14) | C5i—N1—C5—C6 | 0.47 (19) |
| Cu1—O1—C1—O2 | −170.2 (2) | Cu1—N1—C5—C6 | −179.53 (19) |
| Cu1—O1—C1—C2 | 8.8 (3) | N1—C5—C6—C7 | −0.9 (4) |
| C2i—N2—C2—C3 | 0.04 (18) | C5—C6—C7—C6i | 0.44 (18) |
| H··· | ||||
| C3—H3···O2ii | 0.95 | 2.44 | 3.187 (3) | 135 |
| C5—H5···O1i | 0.95 | 2.48 | 3.070 (3) | 120 |
| C6—H6···O1iii | 0.95 | 2.48 | 3.394 (3) | 162 |
Selected bond lengths (Å)
| Cu1—N2 | 1.896 (3) |
| Cu1—N1 | 1.944 (3) |
| Cu1—O1 | 2.0110 (18) |
| Cu1—O1i | 2.0110 (18) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C3—H3⋯O2ii | 0.95 | 2.44 | 3.187 (3) | 135 |
| C5—H5⋯O1i | 0.95 | 2.48 | 3.070 (3) | 120 |
| C6—H6⋯O1iii | 0.95 | 2.48 | 3.394 (3) | 162 |
Symmetry codes: (i) ; (ii) ; (iii) .