Literature DB >> 21582042

Bis[1-ethyl-6-fluoro-7-(4-methyl-piperazin-1-yl)-4-oxo-1,4-dihydro-quinoline-3-carboxyl-ato-κO,O]-copper(II).

Wei Qi, Jing Gao, Di Liang, Zhe An.   

Abstract

In the title compound, [Cu(C(17)H(19)FN(3)O(3))(2)], the Cu(II) atom (site symmetry ) exhibits a slightly distorted CuO(4) square-planar geometry defined by two bidentate O,O'-bonded 1-ethyl-6-fluoro-7-(4-methyl-piperazin-1-yl)-4-oxo-1,4-dihydro-quinoline-3-carboxyl-ate (perfloxacinate) anions.

Entities:  

Year:  2009        PMID: 21582042      PMCID: PMC2968697          DOI: 10.1107/S1600536809003584

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the silver, manganese, cobalt and zinc complexes of the perfloxacinate (pef) anion, see: Baenziger et al. (1986 ▶); An, Huang & Qi (2007 ▶); An, Qi & Huang (2007 ▶); Qi et al.(2008 ▶), respectively. For background on the medicinal uses of Hpef, see: Mizuki et al. (1996 ▶).

Experimental

Crystal data

[Cu(C17H19FN3O3)2] M = 728.24 Triclinic, a = 8.5548 (17) Å b = 10.253 (2) Å c = 10.467 (2) Å α = 95.22 (3)° β = 109.63 (3)° γ = 108.01 (3)° V = 802.7 (4) Å3 Z = 1 Mo Kα radiation μ = 0.75 mm−1 T = 296 (2) K 0.36 × 0.28 × 0.19 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.774, T max = 0.871 7880 measured reflections 3633 independent reflections 3274 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.103 S = 1.14 3633 reflections 225 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.37 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809003584/hb2904sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809003584/hb2904Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C17H19FN3O3)2]Z = 1
Mr = 728.24F(000) = 379
Triclinic, P1Dx = 1.506 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.5548 (17) ÅCell parameters from 7808 reflections
b = 10.253 (2) Åθ = 3.1–27.5°
c = 10.467 (2) ŵ = 0.75 mm1
α = 95.22 (3)°T = 296 K
β = 109.63 (3)°Prism, blue
γ = 108.01 (3)°0.36 × 0.28 × 0.19 mm
V = 802.7 (4) Å3
Bruker SMART CCD area-detector diffractometer3633 independent reflections
Radiation source: fine-focus sealed tube3274 reflections with I > 2σ(I)
graphiteRint = 0.022
Detector resolution: 0 pixels mm-1θmax = 27.5°, θmin = 3.1°
φ and ω scansh = −11→10
Absorption correction: multi-scan (SADABS; Bruker, 2001)k = −10→13
Tmin = 0.774, Tmax = 0.871l = −13→13
7880 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.06P)2 + 0.1742P] where P = (Fo2 + 2Fc2)/3
3633 reflections(Δ/σ)max < 0.001
225 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.37 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50000.50000.50000.02371 (11)
F10.82563 (18)0.16415 (13)0.12581 (17)0.0524 (4)
O10.59169 (18)0.69304 (14)0.50180 (16)0.0337 (3)
O20.7906 (2)0.89436 (16)0.5126 (2)0.0579 (5)
O30.63511 (17)0.45479 (13)0.39993 (15)0.0302 (3)
N11.09849 (19)0.72064 (15)0.39047 (16)0.0239 (3)
N21.1346 (2)0.33064 (16)0.10980 (17)0.0291 (3)
N31.3578 (2)0.24538 (19)−0.00270 (19)0.0353 (4)
C10.7358 (3)0.76677 (19)0.4892 (2)0.0294 (4)
C20.8370 (2)0.69045 (18)0.44045 (19)0.0244 (4)
C30.7735 (2)0.54329 (18)0.39289 (18)0.0231 (3)
C40.8738 (2)0.49016 (18)0.32802 (19)0.0233 (3)
C50.8070 (2)0.34754 (19)0.2611 (2)0.0297 (4)
H5A0.70140.28640.26170.036*
C60.8976 (3)0.30001 (19)0.1959 (2)0.0315 (4)
C71.0598 (2)0.38636 (19)0.1906 (2)0.0267 (4)
C81.1264 (2)0.52630 (19)0.2581 (2)0.0258 (4)
H8A1.23360.58610.25870.031*
C91.0346 (2)0.57967 (18)0.32596 (18)0.0227 (3)
C100.9982 (2)0.77176 (18)0.43938 (19)0.0254 (4)
H10A1.04000.86800.47480.031*
C111.2746 (2)0.81963 (19)0.4025 (2)0.0307 (4)
H11A1.35930.77210.42290.037*
H11B1.31710.89850.47970.037*
C121.2671 (3)0.8743 (2)0.2716 (3)0.0470 (6)
H12A1.22530.79670.19480.071*
H12B1.38390.93580.28400.071*
H12C1.18730.92490.25300.071*
C131.2615 (3)0.4313 (2)0.0678 (2)0.0326 (4)
H13A1.37460.47600.14590.039*
H13B1.21650.50360.03660.039*
C141.2866 (3)0.3524 (2)−0.0493 (2)0.0333 (4)
H14A1.17320.3084−0.12720.040*
H14B1.36770.4179−0.08030.040*
C151.2292 (3)0.1448 (2)0.0361 (2)0.0352 (4)
H15A1.27320.07160.06570.042*
H15B1.11780.1013−0.04390.042*
C161.1970 (3)0.2168 (2)0.1528 (2)0.0332 (4)
H16A1.10850.14900.17570.040*
H16B1.30650.25510.23490.040*
C171.3936 (4)0.1748 (3)−0.1120 (3)0.0563 (7)
H17A1.44810.1096−0.07680.084*
H17B1.47240.2435−0.14070.084*
H17C1.28380.1252−0.19000.084*
U11U22U33U12U13U23
Cu10.02365 (17)0.02145 (17)0.03097 (19)0.00834 (12)0.01668 (13)0.00415 (12)
F10.0481 (7)0.0230 (6)0.0834 (10)−0.0009 (5)0.0416 (7)−0.0160 (6)
O10.0325 (7)0.0262 (7)0.0559 (9)0.0138 (5)0.0299 (7)0.0110 (6)
O20.0654 (11)0.0217 (7)0.1127 (16)0.0147 (7)0.0680 (12)0.0092 (9)
O30.0283 (6)0.0214 (6)0.0445 (8)0.0039 (5)0.0246 (6)0.0008 (6)
N10.0220 (7)0.0178 (7)0.0334 (8)0.0060 (5)0.0139 (6)0.0034 (6)
N20.0363 (8)0.0222 (8)0.0393 (9)0.0123 (6)0.0254 (7)0.0066 (7)
N30.0379 (9)0.0391 (10)0.0392 (10)0.0191 (7)0.0234 (8)0.0049 (8)
C10.0347 (9)0.0217 (9)0.0419 (11)0.0126 (7)0.0242 (8)0.0078 (8)
C20.0278 (8)0.0210 (8)0.0297 (9)0.0104 (7)0.0162 (7)0.0049 (7)
C30.0244 (8)0.0214 (8)0.0263 (9)0.0083 (6)0.0131 (7)0.0053 (7)
C40.0248 (8)0.0192 (8)0.0292 (9)0.0077 (6)0.0147 (7)0.0048 (7)
C50.0291 (9)0.0207 (9)0.0405 (11)0.0047 (7)0.0200 (8)0.0020 (8)
C60.0329 (9)0.0179 (8)0.0440 (11)0.0041 (7)0.0218 (8)−0.0016 (8)
C70.0295 (9)0.0224 (9)0.0329 (9)0.0102 (7)0.0177 (8)0.0037 (7)
C80.0247 (8)0.0219 (8)0.0345 (9)0.0083 (6)0.0162 (7)0.0056 (7)
C90.0246 (8)0.0185 (8)0.0271 (9)0.0088 (6)0.0119 (7)0.0041 (7)
C100.0287 (8)0.0179 (8)0.0319 (9)0.0086 (7)0.0148 (7)0.0027 (7)
C110.0219 (8)0.0205 (8)0.0489 (12)0.0038 (6)0.0178 (8)0.0007 (8)
C120.0486 (12)0.0361 (12)0.0679 (16)0.0106 (10)0.0388 (12)0.0182 (11)
C130.0386 (10)0.0251 (9)0.0428 (11)0.0110 (8)0.0265 (9)0.0077 (8)
C140.0374 (10)0.0336 (10)0.0347 (10)0.0115 (8)0.0220 (8)0.0069 (8)
C150.0459 (11)0.0307 (10)0.0407 (11)0.0203 (9)0.0249 (9)0.0079 (8)
C160.0454 (11)0.0308 (10)0.0370 (11)0.0198 (8)0.0258 (9)0.0100 (8)
C170.0764 (18)0.0512 (15)0.0686 (17)0.0307 (13)0.0547 (15)0.0096 (13)
Cu1—O1i1.8858 (15)C6—C71.419 (3)
Cu1—O11.8858 (15)C7—C81.387 (3)
Cu1—O31.9247 (13)C8—C91.411 (2)
Cu1—O3i1.9247 (13)C8—H8A0.9300
F1—C61.356 (2)C10—H10A0.9300
O1—C11.288 (2)C11—C121.517 (3)
O2—C11.215 (2)C11—H11A0.9700
O3—C31.279 (2)C11—H11B0.9700
N1—C101.341 (2)C12—H12A0.9600
N1—C91.389 (2)C12—H12B0.9600
N1—C111.490 (2)C12—H12C0.9600
N2—C71.397 (2)C13—C141.517 (3)
N2—C131.465 (2)C13—H13A0.9700
N2—C161.473 (2)C13—H13B0.9700
N3—C151.454 (3)C14—H14A0.9700
N3—C141.458 (3)C14—H14B0.9700
N3—C171.465 (3)C15—C161.516 (3)
C1—C21.505 (2)C15—H15A0.9700
C2—C101.378 (2)C15—H15B0.9700
C2—C31.412 (2)C16—H16A0.9700
C3—C41.451 (2)C16—H16B0.9700
C4—C91.406 (2)C17—H17A0.9600
C4—C51.408 (3)C17—H17B0.9600
C5—C61.354 (3)C17—H17C0.9600
C5—H5A0.9300
O1i—Cu1—O1180.0N1—C10—H10A118.0
O1i—Cu1—O387.35 (6)C2—C10—H10A118.0
O1—Cu1—O392.65 (6)N1—C11—C12112.76 (17)
O1i—Cu1—O3i92.65 (6)N1—C11—H11A109.0
O1—Cu1—O3i87.35 (6)C12—C11—H11A109.0
O3—Cu1—O3i180.0N1—C11—H11B109.0
C1—O1—Cu1130.33 (12)C12—C11—H11B109.0
C3—O3—Cu1124.62 (12)H11A—C11—H11B107.8
C10—N1—C9119.95 (15)C11—C12—H12A109.5
C10—N1—C11118.31 (15)C11—C12—H12B109.5
C9—N1—C11121.70 (14)H12A—C12—H12B109.5
C7—N2—C13116.83 (15)C11—C12—H12C109.5
C7—N2—C16117.25 (15)H12A—C12—H12C109.5
C13—N2—C16111.04 (15)H12B—C12—H12C109.5
C15—N3—C14108.25 (16)N2—C13—C14108.39 (16)
C15—N3—C17110.58 (18)N2—C13—H13A110.0
C14—N3—C17110.99 (18)C14—C13—H13A110.0
O2—C1—O1122.66 (17)N2—C13—H13B110.0
O2—C1—C2119.20 (17)C14—C13—H13B110.0
O1—C1—C2118.13 (16)H13A—C13—H13B108.4
C10—C2—C3119.32 (16)N3—C14—C13110.51 (17)
C10—C2—C1116.81 (15)N3—C14—H14A109.5
C3—C2—C1123.84 (16)C13—C14—H14A109.5
O3—C3—C2125.72 (16)N3—C14—H14B109.5
O3—C3—C4118.07 (15)C13—C14—H14B109.5
C2—C3—C4116.19 (15)H14A—C14—H14B108.1
C9—C4—C5118.77 (16)N3—C15—C16110.62 (17)
C9—C4—C3121.23 (16)N3—C15—H15A109.5
C5—C4—C3119.96 (16)C16—C15—H15A109.5
C6—C5—C4119.63 (17)N3—C15—H15B109.5
C6—C5—H5A120.2C16—C15—H15B109.5
C4—C5—H5A120.2H15A—C15—H15B108.1
C5—C6—F1118.45 (17)N2—C16—C15109.86 (16)
C5—C6—C7123.62 (17)N2—C16—H16A109.7
F1—C6—C7117.85 (16)C15—C16—H16A109.7
C8—C7—N2123.85 (16)N2—C16—H16B109.7
C8—C7—C6116.62 (16)C15—C16—H16B109.7
N2—C7—C6119.30 (16)H16A—C16—H16B108.2
C7—C8—C9121.24 (16)N3—C17—H17A109.5
C7—C8—H8A119.4N3—C17—H17B109.5
C9—C8—H8A119.4H17A—C17—H17B109.5
N1—C9—C4118.52 (15)N3—C17—H17C109.5
N1—C9—C8121.36 (15)H17A—C17—H17C109.5
C4—C9—C8120.11 (16)H17B—C17—H17C109.5
N1—C10—C2124.01 (16)
O3—Cu1—O1—C1−22.51 (19)C5—C6—C7—N2−174.06 (19)
O3i—Cu1—O1—C1157.49 (19)F1—C6—C7—N22.6 (3)
O1i—Cu1—O3—C3−160.14 (16)N2—C7—C8—C9173.18 (17)
O1—Cu1—O3—C319.86 (16)C6—C7—C8—C9−1.2 (3)
Cu1—O1—C1—O2−168.97 (18)C10—N1—C9—C4−7.3 (3)
Cu1—O1—C1—C212.5 (3)C11—N1—C9—C4175.07 (17)
O2—C1—C2—C106.8 (3)C10—N1—C9—C8171.97 (17)
O1—C1—C2—C10−174.60 (18)C11—N1—C9—C8−5.6 (3)
O2—C1—C2—C3−171.3 (2)C5—C4—C9—N1179.12 (17)
O1—C1—C2—C37.3 (3)C3—C4—C9—N11.4 (3)
Cu1—O3—C3—C2−8.9 (3)C5—C4—C9—C8−0.2 (3)
Cu1—O3—C3—C4172.47 (12)C3—C4—C9—C8−177.85 (16)
C10—C2—C3—O3173.24 (17)C7—C8—C9—N1−178.24 (17)
C1—C2—C3—O3−8.7 (3)C7—C8—C9—C41.0 (3)
C10—C2—C3—C4−8.1 (3)C9—N1—C10—C25.5 (3)
C1—C2—C3—C4169.88 (17)C11—N1—C10—C2−176.84 (18)
O3—C3—C4—C9−175.10 (16)C3—C2—C10—N12.7 (3)
C2—C3—C4—C96.2 (3)C1—C2—C10—N1−175.49 (17)
O3—C3—C4—C57.3 (3)C10—N1—C11—C12−95.8 (2)
C2—C3—C4—C5−171.48 (17)C9—N1—C11—C1281.9 (2)
C9—C4—C5—C6−0.4 (3)C7—N2—C13—C14−164.32 (17)
C3—C4—C5—C6177.27 (18)C16—N2—C13—C1457.6 (2)
C4—C5—C6—F1−176.44 (19)C15—N3—C14—C1362.2 (2)
C4—C5—C6—C70.2 (3)C17—N3—C14—C13−176.26 (18)
C13—N2—C7—C8−15.2 (3)N2—C13—C14—N3−60.8 (2)
C16—N2—C7—C8120.3 (2)C14—N3—C15—C16−60.3 (2)
C13—N2—C7—C6159.03 (19)C17—N3—C15—C16178.0 (2)
C16—N2—C7—C6−65.5 (2)C7—N2—C16—C15165.57 (17)
C5—C6—C7—C80.6 (3)C13—N2—C16—C15−56.5 (2)
F1—C6—C7—C8177.28 (18)N3—C15—C16—N257.7 (2)
Table 1

Selected bond lengths (Å)

Cu1—O11.8858 (15)
Cu1—O31.9247 (13)
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Aqua-bis[1-ethyl-6-fluoro-7-(4-methyl-piperazin-1-yl)-4-oxo-1,4-dihydro-quinoline-3-carboxyl-ato]zinc(II) dihydrate.

Authors:  Wei Qi; Jing Huang; Zhe An
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-01-09

Review 3.  Pharmacokinetic interactions related to the chemical structures of fluoroquinolones.

Authors:  Y Mizuki; I Fujiwara; T Yamaguchi
Journal:  J Antimicrob Chemother       Date:  1996-05       Impact factor: 5.790

  3 in total

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