Literature DB >> 21581923

Methyl gallate.

Deborah Bebout, Silvina Pagola.   

Abstract

THE CRYSTAL STRUCTURE OF THE TITLE COMPOUND (SYSTEMATIC NAME: methyl 3,4,5-trihydroxy-benzoate), C(8)H(8)O(5), is composed of essentially planar mol-ecules [maximum departures from the mean carbon and oxygen skeleton plane of 0.0348 (10) Å]. The H atoms of the three hydroxyl groups, which function as hydrogen-bond donors and acceptors simultaneously, are oriented in the same direction around the aromatic ring. In addition to two intra-molecular hydrogen bonds, each mol-ecule is hydrogen bonded to six others, creating a three-dimensional hydrogen-bonded network.

Entities:  

Year:  2009        PMID: 21581923      PMCID: PMC2968310          DOI: 10.1107/S1600536809001123

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For natural extracts containing gallic acid methyl ester, see: Saxena et al. (1994 ▶); Schmidt et al. (2003 ▶); Hawas (2007 ▶). For studies concerning anti­oxidant activity, see: Aruoma et al. (1993 ▶); Schmidt et al. (2003 ▶); Hawas (2007 ▶). For studies concerning anti­cancer properties, see: Fiuza et al. (2004 ▶) and for anti­microbial properties, see: Saxena et al. (1994 ▶); Landete et al. (2007 ▶). For cocrystals containing gallic acid methyl ester, see: Sekine et al. (2003 ▶); Martin et al. (1986 ▶). Similar gallate ester conformations are found in Parkin et al. (2002 ▶); Okabe & Kyoyama (2002a ▶); Nomura et al. (2000 ▶); Mizuguchi et al. (2005 ▶). For structures with similar hydroxyl arrangements, see: Hitachi et al. (2005 ▶); Okabe et al. (2001 ▶); Okabe & Kyoyama (2002b ▶). For a description of the Cambridge Structural Database, see: Allen (2002 ▶).

Experimental

Crystal data

C8H8O5 M = 184.14 Monoclinic, a = 7.6963 (2) Å b = 9.9111 (2) Å c = 10.5625 (2) Å β = 95.9930 (10)° V = 801.29 (3) Å3 Z = 4 Cu Kα radiation μ = 1.12 mm−1 T = 100 (2) K 0.31 × 0.23 × 0.21 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: numerical (SADABS; Sheldrick, 2004 ▶) T min = 0.723, T max = 0.799 8192 measured reflections 1352 independent reflections 1311 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.093 S = 0.69 1352 reflections 121 parameters All H-atom parameters refined Δρmax = 0.23 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker , 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2004 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: WinGX (Farrugia, 1999 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809001123/rz2286sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809001123/rz2286Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H8O5F(000) = 384
Mr = 184.14Dx = 1.526 Mg m3
Monoclinic, P21/nMelting point: 474 K
Hall symbol: -P 2ynCu Kα radiation, λ = 1.54178 Å
a = 7.6963 (2) ÅCell parameters from 1352 reflections
b = 9.9111 (2) Åθ = 6.1–67.0°
c = 10.5625 (2) ŵ = 1.12 mm1
β = 95.993 (1)°T = 100 K
V = 801.29 (3) Å3Rhombic prism, colourless
Z = 40.31 × 0.23 × 0.21 mm
Bruker SMART APEXII CCD diffractometer1352 independent reflections
Radiation source: fine-focus sealed tube1311 reflections with I > 2σ(I)
graphiteRint = 0.034
ω and ψ scansθmax = 67.0°, θmin = 6.1°
Absorption correction: numerical (SADABS; Sheldrick, 2004)h = −8→9
Tmin = 0.723, Tmax = 0.799k = −11→11
8192 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: difference Fourier map
wR(F2) = 0.093All H-atom parameters refined
S = 0.69w = 1/[σ2(Fo2) + (0.0834P)2 + 0.9466P] where P = (Fo2 + 2Fc2)/3
1352 reflections(Δ/σ)max = 0.004
121 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.20 e Å3
32 constraints
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
O10.14003 (11)1.05605 (9)0.77633 (8)0.0145 (2)
O20.29090 (12)0.99023 (9)0.61631 (8)0.0156 (3)
O3−0.38148 (12)0.74067 (10)0.72722 (9)0.0189 (3)
H3−0.43890.67420.69630.028*
O4−0.33530 (12)0.58249 (9)0.52444 (9)0.0167 (2)
H4−0.3140.54620.45590.025*
O5−0.05442 (13)0.61740 (10)0.39075 (9)0.0185 (3)
H50.01270.65240.34220.028*
C70.15489 (17)0.98352 (13)0.68447 (12)0.0121 (3)
C10.02736 (17)0.87858 (13)0.63777 (12)0.0126 (3)
C2−0.11958 (17)0.85957 (13)0.70290 (12)0.0126 (3)
H2−0.13780.91450.7740.015*
C3−0.23803 (17)0.75983 (13)0.66260 (12)0.0129 (3)
C4−0.21306 (17)0.67861 (13)0.55808 (12)0.0129 (3)
C5−0.06683 (17)0.69987 (13)0.49284 (12)0.0134 (3)
C60.05370 (16)0.79838 (13)0.53249 (12)0.0134 (3)
H60.15390.81160.48850.016*
C80.42258 (18)1.09026 (14)0.65644 (13)0.0182 (3)
H8A0.51611.08670.60030.027*
H8B0.47121.07150.74410.027*
H8C0.36951.18020.65210.027*
U11U22U33U12U13U23
O10.0147 (5)0.0147 (5)0.0141 (5)0.0011 (4)0.0010 (4)−0.0023 (4)
O20.0135 (5)0.0186 (5)0.0153 (5)−0.0048 (4)0.0040 (4)−0.0030 (4)
O30.0171 (5)0.0206 (5)0.0209 (5)−0.0067 (4)0.0108 (4)−0.0070 (4)
O40.0188 (5)0.0180 (5)0.0141 (5)−0.0071 (4)0.0058 (4)−0.0043 (4)
O50.0237 (5)0.0196 (5)0.0140 (5)−0.0080 (4)0.0103 (4)−0.0057 (4)
C10.0135 (6)0.0127 (6)0.0114 (6)0.0019 (5)0.0004 (5)0.0028 (5)
C20.0147 (7)0.0130 (6)0.0104 (6)0.0023 (5)0.0021 (5)−0.0002 (5)
C30.0127 (6)0.0147 (6)0.0120 (6)0.0012 (5)0.0041 (5)0.0025 (5)
C40.0137 (6)0.0123 (6)0.0124 (6)−0.0012 (5)0.0000 (5)0.0022 (5)
C50.0176 (7)0.0129 (6)0.0100 (6)0.0012 (5)0.0032 (5)0.0002 (5)
C60.0127 (6)0.0159 (7)0.0121 (6)0.0004 (5)0.0040 (5)0.0024 (5)
C70.0129 (7)0.0122 (6)0.0111 (6)0.0037 (5)0.0006 (5)0.0030 (5)
C80.0157 (7)0.0203 (7)0.0185 (7)−0.0071 (5)0.0015 (6)−0.0010 (5)
O1—C71.2225 (16)C1—C61.3988 (19)
O2—C71.3327 (15)C2—C31.3815 (18)
O2—C81.4491 (16)C2—H20.95
O3—C31.3705 (15)C3—C41.3957 (18)
O3—H30.84C4—C51.3956 (18)
O4—C41.3598 (16)C5—C61.3813 (18)
O4—H40.84C6—H60.95
O5—C51.3644 (16)C8—H8A0.98
O5—H50.84C8—H8B0.98
C7—C11.4790 (19)C8—H8C0.98
C1—C21.3965 (17)
C7—O2—C8116.16 (10)O4—C4—C5123.25 (11)
C3—O3—H3109.5O4—C4—C3117.52 (11)
C4—O4—H4109.5C5—C4—C3119.22 (12)
C5—O5—H5109.5O5—C5—C6124.25 (11)
O1—C7—O2122.91 (12)O5—C5—C4115.24 (12)
O1—C7—C1124.36 (11)C6—C5—C4120.51 (11)
O2—C7—C1112.72 (11)C5—C6—C1119.62 (12)
C2—C1—C6120.47 (12)C5—C6—H6120.2
C2—C1—C7118.29 (11)C1—C6—H6120.2
C6—C1—C7121.24 (12)O2—C8—H8A109.5
C3—C2—C1119.15 (12)O2—C8—H8B109.5
C3—C2—H2120.4H8A—C8—H8B109.5
C1—C2—H2120.4O2—C8—H8C109.5
O3—C3—C2119.06 (11)H8A—C8—H8C109.5
O3—C3—C4119.91 (12)H8B—C8—H8C109.5
C2—C3—C4121.03 (12)
C8—O2—C7—O1−0.42 (18)C2—C3—C4—O4179.88 (11)
C8—O2—C7—C1−179.68 (10)O3—C3—C4—C5179.65 (11)
O1—C7—C1—C2−0.53 (19)C2—C3—C4—C5−0.7 (2)
O2—C7—C1—C2178.71 (11)O4—C4—C5—O50.45 (19)
O1—C7—C1—C6−179.44 (12)C3—C4—C5—O5−178.97 (11)
O2—C7—C1—C6−0.19 (17)O4—C4—C5—C6−179.37 (11)
C6—C1—C2—C30.47 (19)C3—C4—C5—C61.21 (19)
C7—C1—C2—C3−178.44 (11)O5—C5—C6—C1179.28 (12)
C1—C2—C3—O3179.52 (11)C4—C5—C6—C1−0.92 (19)
C1—C2—C3—C4−0.17 (19)C2—C1—C6—C50.07 (19)
O3—C3—C4—O40.19 (18)C7—C1—C6—C5178.95 (11)
D—H···AD—HH···AD···AD—H···A
O3—H3···O40.842.252.7075 (13)115
O4—H4···O50.842.292.7247 (12)112
O4—H4···O1i0.842.152.9470 (13)159
O3—H3···O1ii0.841.992.7007 (12)142
O5—H5···O3iii0.841.862.6859 (12)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O40.842.252.7075 (13)115
O4—H4⋯O50.842.292.7247 (12)112
O4—H4⋯O1i0.842.152.9470 (13)159
O3—H3⋯O1ii0.841.992.7007 (12)142
O5—H5⋯O3iii0.841.862.6859 (12)166

Symmetry codes: (i) ; (ii) ; (iii) .

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