Literature DB >> 21581883

4,4'-(Cyclo-hexane-1,1-di-yl)diphenol methanol solvate.

Jun Shuai, Ying Liu, Mo Liu, Dengke Liu.   

Abstract

The title compound, crystallized as a methanol solvate, C(18)H(20)O(2)·CH(3)OH, is an inter-mediate in the synthesis of the anti-lipidemic agent clinofibrate. Mol-ecules are packed together with the methanol solvent molecule via two O-H⋯O hydrogen bonds. The third O-H⋯O hydrogen bond is between neighboring 4,4'-(cyclo-hexane-1,1-di-yl)diphenol mol-ecules. The dihedral angle between two benzene rings planes is 81.69 (6).

Entities:  

Year:  2009        PMID: 21581883      PMCID: PMC2968192          DOI: 10.1107/S1600536809000427

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of the anti-lipidemic agent clinofibrate, see: Nishizawa et al. (1993 ▶). For the synthesis of clinofibrate, see: Zimmerman et al. (1974 ▶). For a similar structure, see: Nassimbeni et al. (2007 ▶).

Experimental

Crystal data

C18H20O2·CH4O M = 300.38 Triclinic, a = 6.2245 (12) Å b = 10.889 (2) Å c = 12.712 (3) Å α = 90.02 (3)° β = 100.82 (3)° γ = 90.03 (3)° V = 846.3 (3) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 113 (2) K 0.16 × 0.12 × 0.08 mm

Data collection

Rigaku Saturn diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.988, T max = 0.994 8706 measured reflections 2946 independent reflections 2042 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.182 S = 1.08 2946 reflections 203 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.47 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809000427/bq2114sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809000427/bq2114Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H20O2·CH4OZ = 2
Mr = 300.38F(000) = 324
Triclinic, P1Dx = 1.179 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.2245 (12) ÅCell parameters from 2488 reflections
b = 10.889 (2) Åθ = 2.5–27.5°
c = 12.712 (3) ŵ = 0.08 mm1
α = 90.02 (3)°T = 113 K
β = 100.82 (3)°Block, colorless
γ = 90.03 (3)°0.16 × 0.12 × 0.08 mm
V = 846.3 (3) Å3
Rigaku Saturn diffractometer2946 independent reflections
Radiation source: rotating anode2042 reflections with I > 2σ(I)
confocalRint = 0.042
ω scansθmax = 25.0°, θmin = 2.5°
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)h = −7→7
Tmin = 0.988, Tmax = 0.994k = −12→12
8706 measured reflectionsl = −15→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.182H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.1196P)2] where P = (Fo2 + 2Fc2)/3
2946 reflections(Δ/σ)max = 0.002
203 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.47 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.6975 (2)0.24041 (13)0.37035 (12)0.0310 (4)
H10.60220.19030.37640.046*
O20.4365 (3)1.08574 (14)0.39912 (12)0.0299 (4)
H20.31991.10920.41330.045*
O30.1059 (3)0.19930 (17)0.49467 (14)0.0468 (6)
H3−0.00390.21320.44950.070*
C10.4012 (3)0.69382 (19)0.01335 (15)0.0191 (5)
H1A0.37320.6162−0.02420.023*
H1B0.55800.70330.03610.023*
C20.3017 (3)0.80790 (19)−0.06599 (15)0.0210 (5)
H2A0.35500.8835−0.02990.025*
H2B0.36620.8022−0.12960.025*
C30.0496 (3)0.8225 (2)−0.10442 (16)0.0239 (5)
H3A0.02020.8974−0.14590.029*
H3B−0.00580.7540−0.15040.029*
C4−0.0694 (3)0.82727 (19)−0.00891 (16)0.0219 (5)
H4A−0.22610.8184−0.03250.026*
H4B−0.04010.90410.02980.026*
C50.0328 (3)0.70978 (18)0.06654 (15)0.0199 (5)
H5A−0.04020.70850.12760.024*
H5B−0.01240.63600.02550.024*
C60.2867 (3)0.69626 (18)0.11244 (15)0.0164 (5)
C70.3890 (3)0.57198 (18)0.18020 (15)0.0168 (5)
C80.2680 (3)0.48381 (18)0.19927 (16)0.0212 (5)
H80.11780.48690.17430.025*
C90.3686 (3)0.37378 (19)0.26271 (15)0.0228 (5)
H90.27040.31290.27380.027*
C100.5952 (3)0.34952 (19)0.30856 (15)0.0205 (5)
C110.7200 (3)0.43517 (19)0.29044 (16)0.0206 (5)
H110.87030.43100.31490.025*
C120.6166 (3)0.54470 (18)0.22754 (15)0.0202 (5)
H120.71540.60560.21710.024*
C130.3242 (3)0.80415 (17)0.18613 (15)0.0161 (5)
C140.2027 (3)0.83272 (18)0.26803 (15)0.0201 (5)
H140.08560.78120.27260.024*
C150.2381 (3)0.92511 (18)0.33890 (15)0.0212 (5)
H150.15140.93870.38990.025*
C160.4000 (3)0.99216 (18)0.33016 (15)0.0186 (5)
C170.5266 (3)0.96472 (18)0.25107 (15)0.0188 (5)
H170.64601.01510.24810.023*
C180.4885 (3)0.87244 (18)0.18052 (15)0.0171 (5)
H180.57670.85880.13020.021*
C190.1690 (4)0.3024 (2)0.54959 (18)0.0327 (6)
H19A0.04520.33910.57250.049*
H19B0.22820.35890.50450.049*
H19C0.27860.28300.61110.049*
U11U22U33U12U13U23
O10.0309 (9)0.0222 (9)0.0363 (9)−0.0127 (7)−0.0028 (7)0.0079 (7)
O20.0336 (9)0.0277 (9)0.0282 (9)−0.0155 (7)0.0057 (7)−0.0146 (7)
O30.0422 (11)0.0542 (12)0.0436 (11)−0.0301 (9)0.0073 (8)−0.0248 (9)
C10.0167 (10)0.0204 (11)0.0205 (11)−0.0082 (8)0.0039 (8)−0.0053 (8)
C20.0215 (11)0.0245 (12)0.0170 (10)−0.0090 (9)0.0039 (9)−0.0021 (8)
C30.0229 (11)0.0257 (12)0.0214 (11)−0.0088 (9)−0.0004 (9)0.0027 (9)
C40.0142 (10)0.0233 (12)0.0266 (12)−0.0064 (9)0.0000 (9)0.0022 (9)
C50.0179 (11)0.0201 (11)0.0213 (11)−0.0076 (8)0.0023 (9)−0.0008 (8)
C60.0139 (10)0.0164 (11)0.0185 (11)−0.0077 (8)0.0019 (8)−0.0020 (8)
C70.0183 (10)0.0164 (11)0.0157 (10)−0.0083 (8)0.0035 (8)−0.0048 (8)
C80.0180 (11)0.0214 (12)0.0228 (11)−0.0100 (9)0.0005 (9)−0.0016 (9)
C90.0196 (11)0.0212 (12)0.0263 (12)−0.0115 (9)0.0010 (9)−0.0004 (9)
C100.0247 (11)0.0173 (11)0.0177 (10)−0.0077 (9)−0.0004 (9)−0.0009 (8)
C110.0154 (10)0.0219 (11)0.0232 (11)−0.0081 (9)0.0005 (9)−0.0014 (9)
C120.0190 (11)0.0191 (11)0.0219 (11)−0.0119 (9)0.0020 (9)−0.0042 (8)
C130.0159 (10)0.0165 (11)0.0149 (10)−0.0056 (8)0.0000 (8)0.0012 (8)
C140.0177 (10)0.0200 (11)0.0229 (11)−0.0109 (9)0.0049 (8)0.0000 (8)
C150.0236 (11)0.0226 (12)0.0193 (11)−0.0103 (9)0.0091 (9)−0.0022 (9)
C160.0229 (11)0.0159 (11)0.0150 (10)−0.0068 (9)−0.0011 (8)−0.0008 (8)
C170.0178 (10)0.0182 (11)0.0197 (11)−0.0104 (9)0.0017 (9)0.0023 (8)
C180.0165 (10)0.0186 (11)0.0163 (10)−0.0069 (8)0.0033 (8)−0.0009 (8)
C190.0352 (13)0.0298 (14)0.0313 (13)−0.0126 (11)0.0018 (11)−0.0088 (10)
O1—C101.499 (2)C7—C81.271 (3)
O1—H10.8200C7—C121.462 (3)
O2—C161.335 (2)C8—C91.513 (3)
O2—H20.8200C8—H80.9300
O3—C191.341 (3)C9—C101.446 (3)
O3—H30.8200C9—H90.9300
C1—C61.560 (3)C10—C111.262 (3)
C1—C21.647 (3)C11—C121.511 (3)
C1—H1A0.9700C11—H110.9300
C1—H1B0.9700C12—H120.9300
C2—C31.562 (3)C13—C181.277 (3)
C2—H2A0.9700C13—C141.431 (3)
C2—H2B0.9700C14—C151.341 (3)
C3—C41.537 (3)C14—H140.9300
C3—H3A0.9700C15—C161.266 (3)
C3—H3B0.9700C15—H150.9300
C4—C51.653 (3)C16—C171.421 (3)
C4—H4A0.9700C17—C181.338 (3)
C4—H4B0.9700C17—H170.9300
C5—C61.586 (3)C18—H180.9300
C5—H5A0.9700C19—H19A0.9600
C5—H5B0.9700C19—H19B0.9600
C6—C131.493 (3)C19—H19C0.9600
C6—C71.666 (3)
C10—O1—H1109.5C12—C7—C6128.71 (15)
C16—O2—H2109.5C7—C8—C9119.95 (19)
C19—O3—H3109.5C7—C8—H8120.0
C6—C1—C2107.79 (16)C9—C8—H8120.0
C6—C1—H1A110.1C10—C9—C8129.39 (16)
C2—C1—H1A110.1C10—C9—H9115.3
C6—C1—H1B110.1C8—C9—H9115.3
C2—C1—H1B110.1C11—C10—C9112.22 (19)
H1A—C1—H1B108.5C11—C10—O1117.78 (18)
C3—C2—C1120.64 (15)C9—C10—O1129.99 (16)
C3—C2—H2A107.2C10—C11—C12117.69 (19)
C1—C2—H2A107.2C10—C11—H11121.2
C3—C2—H2B107.2C12—C11—H11121.2
C1—C2—H2B107.2C7—C12—C11131.45 (16)
H2A—C2—H2B106.8C7—C12—H12114.3
C4—C3—C2111.17 (16)C11—C12—H12114.3
C4—C3—H3A109.4C18—C13—C14116.89 (18)
C2—C3—H3A109.4C18—C13—C6117.07 (18)
C4—C3—H3B109.4C14—C13—C6125.86 (15)
C2—C3—H3B109.4C15—C14—C13127.54 (17)
H3A—C3—H3B108.0C15—C14—H14116.2
C3—C4—C5104.04 (16)C13—C14—H14116.2
C3—C4—H4A110.9C16—C15—C14114.0 (2)
C5—C4—H4A110.9C16—C15—H15123.0
C3—C4—H4B110.9C14—C15—H15123.0
C5—C4—H4B110.9C15—C16—O2114.96 (19)
H4A—C4—H4B109.0C15—C16—C17119.83 (18)
C6—C5—C4122.27 (14)O2—C16—C17125.21 (16)
C6—C5—H5A106.8C18—C17—C16125.45 (17)
C4—C5—H5A106.8C18—C17—H17117.3
C6—C5—H5B106.8C16—C17—H17117.3
C4—C5—H5B106.8C13—C18—C17116.28 (19)
H5A—C5—H5B106.6C13—C18—H18121.9
C13—C6—C1118.62 (15)C17—C18—H18121.9
C13—C6—C5100.64 (16)O3—C19—H19A109.5
C1—C6—C5106.23 (15)O3—C19—H19B109.5
C13—C6—C7108.39 (14)H19A—C19—H19B109.5
C1—C6—C7102.45 (15)O3—C19—H19C109.5
C5—C6—C7121.61 (14)H19A—C19—H19C109.5
C8—C7—C12109.31 (19)H19B—C19—H19C109.5
C8—C7—C6121.98 (18)
C6—C1—C2—C3−53.3 (2)C9—C10—C11—C120.5 (3)
C1—C2—C3—C454.9 (2)O1—C10—C11—C12179.62 (15)
C2—C3—C4—C5−48.21 (19)C8—C7—C12—C110.3 (3)
C3—C4—C5—C657.8 (2)C6—C7—C12—C11179.37 (17)
C2—C1—C6—C13−64.5 (2)C10—C11—C12—C7−0.7 (3)
C2—C1—C6—C547.66 (18)C1—C6—C13—C18−17.5 (3)
C2—C1—C6—C7176.22 (12)C5—C6—C13—C18−132.79 (19)
C4—C5—C6—C1365.4 (2)C7—C6—C13—C1898.6 (2)
C4—C5—C6—C1−58.8 (2)C1—C6—C13—C14167.53 (18)
C4—C5—C6—C7−175.10 (15)C5—C6—C13—C1452.3 (2)
C13—C6—C7—C8114.6 (2)C7—C6—C13—C14−76.4 (2)
C1—C6—C7—C8−119.2 (2)C18—C13—C14—C151.6 (3)
C5—C6—C7—C8−1.0 (3)C6—C13—C14—C15176.5 (2)
C13—C6—C7—C12−64.4 (2)C13—C14—C15—C16−0.5 (3)
C1—C6—C7—C1261.8 (2)C14—C15—C16—O2179.16 (18)
C5—C6—C7—C12179.96 (18)C14—C15—C16—C17−0.8 (3)
C12—C7—C8—C90.2 (3)C15—C16—C17—C181.3 (3)
C6—C7—C8—C9−179.03 (15)O2—C16—C17—C18−178.71 (19)
C7—C8—C9—C10−0.2 (3)C14—C13—C18—C17−1.1 (3)
C8—C9—C10—C11−0.2 (3)C6—C13—C18—C17−176.46 (17)
C8—C9—C10—O1−179.14 (17)C16—C17—C18—C13−0.2 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···O2i0.821.602.415 (2)173
O2—H2···O3ii0.822.082.860 (3)159
O3—H3···O1iii0.821.962.767 (2)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O2i0.821.602.415 (2)173
O2—H2⋯O3ii0.822.082.860 (3)159
O3—H3⋯O1iii0.821.962.767 (2)166

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  Inclusion of chlorophenols by 4,4'-(cyclohexane-1,1-diyl)diphenol: structures and kinetics of decomposition.

Authors:  Luigi R Nassimbeni; Hong Su
Journal:  Acta Crystallogr C       Date:  2007-05-11       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Hypertriglyceridemia and lowered apolipoprotein C-II/C-III ratio in uremia: effect of a fibric acid, clinofibrate.

Authors:  Y Nishizawa; T Shoji; H Nishitani; M Yamakawa; T Konishi; K Kawasaki; H Morii
Journal:  Kidney Int       Date:  1993-12       Impact factor: 10.612

  3 in total

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