Literature DB >> 21581873

Ethyl 3-(4-methyl-benzene-sulfonamido)thieno[2,3-b]pyridine-2-carboxyl-ate.

Wen-Qin Zhang, Ren-Lin Zheng, Hang Song, Sheng-Yong Yang, Luo-Ting Yu.   

Abstract

The thieno[2,3-b]pyridine ring system of the title compound, C(17)H(16)N(2)O(4)S(2), is essentially planar, the amino and carbonyl groups being nearly coplanar with the heterocyclic ring system. There are two N-H⋯O hydrogen-bonding inter-actions involving the same N-H donor set and two different acceptors, one in an intra-molecular bond helping to fix the mol-ecular geometry and the other defining a dimeric structure around the symmetry centre at (0, , ).

Entities:  

Year:  2009        PMID: 21581873      PMCID: PMC2968187          DOI: 10.1107/S1600536809000269

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Litvinov et al. (2005 ▶).

Experimental

Crystal data

C17H16N2O4S2 M = 376.46 Orthorhombic, a = 14.809 (4) Å b = 11.892 (3) Å c = 19.494 (5) Å V = 3433.1 (15) Å3 Z = 8 Mo Kα radiation μ = 0.34 mm−1 T = 293 (2) K 0.46 × 0.44 × 0.42 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: spherical [modified Dwiggins (1975 ▶) interpolation procedure] T min = 0.861, T max = 0.872 3590 measured reflections 3075 independent reflections 2032 reflections with I > 2σ(I) R int = 0.005 3 standard reflections every 200 reflections intensity decay: 3.0%

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.186 S = 1.13 3075 reflections 233 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.36 e Å−3 Δρmin = −0.74 e Å−3 Data collection: DIFRAC (Gabe & White, 1993 ▶); cell refinement: DIFRAC; data reduction: NRCVAX (Gabe et al., 1989 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809000269/bg2232sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809000269/bg2232Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H16N2O4S2F(000) = 1568
Mr = 376.46Dx = 1.457 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 24 reflections
a = 14.809 (4) Åθ = 4.5–7.7°
b = 11.892 (3) ŵ = 0.34 mm1
c = 19.494 (5) ÅT = 293 K
V = 3433.1 (15) Å3Block, colourless
Z = 80.46 × 0.44 × 0.42 mm
Enraf–Nonius CAD-4 diffractometer2032 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.005
graphiteθmax = 25.6°, θmin = 2.1°
ω/2θ scansh = −17→10
Absorption correction: for a sphere (interpolation; International Tables for X-ray Crystallography, 1959, Vol II, p. 302; 1992, Vol. C, p. 523); Table 5.3.6 B for muR in the range 2.6-10.0. The interpolation procedure of C.W.Dwiggins Jr (Acta Cryst.(1975) A31,146-148) is used with some modification.k = −2→14
Tmin = 0.861, Tmax = 0.872l = −13→23
3590 measured reflections3 standard reflections every 200 reflections
3075 independent reflections intensity decay: 3.0%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.055H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.186w = 1/[σ2(Fo2) + (0.0996P)2 + 1.4444P] where P = (Fo2 + 2Fc2)/3
S = 1.13(Δ/σ)max < 0.001
3075 reflectionsΔρmax = 0.36 e Å3
233 parametersΔρmin = −0.74 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0175 (17)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.09964 (6)0.61780 (8)0.44511 (5)0.0446 (3)
S2−0.09888 (7)0.97224 (9)0.42142 (5)0.0519 (3)
O10.14122 (18)0.6604 (2)0.38494 (13)0.0557 (7)
O20.09322 (18)0.4988 (2)0.45432 (15)0.0578 (8)
O3−0.12382 (18)0.9327 (2)0.56425 (12)0.0497 (7)
O4−0.0664 (2)0.7593 (3)0.57213 (13)0.0617 (8)
N1−0.0053 (2)0.6628 (3)0.44558 (15)0.0422 (7)
H1N−0.033 (3)0.642 (3)0.4875 (12)0.067 (13)*
N2−0.0759 (3)0.9677 (3)0.28514 (19)0.0651 (10)
C10.2655 (4)0.8311 (6)0.6960 (4)0.129 (3)
H1A0.21730.87230.71720.194*
H1B0.31260.88210.68280.194*
H1C0.28900.77690.72780.194*
C20.2296 (3)0.7703 (6)0.6323 (3)0.0842 (18)
C30.2462 (3)0.8165 (5)0.5677 (3)0.0783 (15)
H30.28270.87980.56350.094*
C40.2083 (3)0.7678 (3)0.5100 (2)0.0578 (11)
H40.21970.79750.46680.069*
C50.1529 (2)0.6741 (3)0.51725 (19)0.0469 (9)
C60.1372 (3)0.6279 (4)0.5808 (2)0.0622 (11)
H60.10060.56460.58500.075*
C70.1755 (3)0.6751 (5)0.6376 (2)0.0826 (16)
H70.16520.64330.68050.099*
C8−0.0288 (2)0.7731 (3)0.42354 (17)0.0399 (8)
C9−0.0649 (2)0.8527 (3)0.46538 (18)0.0417 (8)
C10−0.0648 (2)0.9136 (4)0.34493 (19)0.0495 (10)
C11−0.0285 (2)0.8071 (3)0.35295 (17)0.0434 (9)
C12−0.0836 (2)0.8412 (4)0.53894 (18)0.0446 (9)
C13−0.1472 (3)0.9290 (3)0.63719 (18)0.0524 (10)
H13A−0.09310.92080.66480.063*
H13B−0.18670.86570.64640.063*
C14−0.1939 (3)1.0370 (4)0.6541 (2)0.0623 (11)
H14A−0.15381.09880.64560.093*
H14B−0.21121.03670.70160.093*
H14C−0.24681.04460.62600.093*
C15−0.0523 (3)0.9075 (5)0.2299 (2)0.0724 (14)
H15−0.06060.94030.18700.087*
C16−0.0170 (3)0.8024 (5)0.2319 (2)0.0662 (13)
H16−0.00150.76700.19100.079*
C17−0.0036 (2)0.7466 (4)0.29326 (19)0.0511 (10)
H170.02020.67430.29520.061*
U11U22U33U12U13U23
S10.0471 (6)0.0449 (6)0.0417 (6)0.0037 (4)0.0058 (4)−0.0009 (4)
S20.0528 (6)0.0546 (7)0.0483 (6)0.0089 (5)−0.0010 (4)0.0069 (5)
O10.0528 (15)0.0707 (19)0.0435 (16)0.0033 (14)0.0104 (12)0.0073 (13)
O20.0690 (19)0.0428 (17)0.0617 (19)0.0040 (13)0.0060 (13)−0.0015 (13)
O30.0542 (15)0.0584 (17)0.0365 (14)0.0043 (13)0.0087 (11)−0.0027 (12)
O40.084 (2)0.066 (2)0.0350 (15)0.0072 (16)0.0038 (14)0.0072 (14)
N10.0420 (16)0.0428 (17)0.0418 (17)−0.0035 (13)0.0015 (13)0.0029 (13)
N20.072 (2)0.075 (3)0.048 (2)0.0039 (19)−0.0066 (17)0.0199 (19)
C10.093 (4)0.175 (7)0.120 (5)0.051 (4)−0.052 (4)−0.086 (5)
C20.047 (3)0.123 (5)0.083 (4)0.031 (3)−0.024 (2)−0.047 (3)
C30.053 (3)0.084 (4)0.098 (4)0.010 (2)−0.017 (3)−0.028 (3)
C40.050 (2)0.049 (2)0.074 (3)0.0013 (18)−0.005 (2)−0.002 (2)
C50.043 (2)0.050 (2)0.048 (2)0.0082 (17)0.0021 (16)0.0002 (17)
C60.053 (2)0.079 (3)0.055 (3)−0.001 (2)−0.0040 (19)0.007 (2)
C70.058 (3)0.140 (5)0.050 (3)0.026 (3)−0.010 (2)−0.012 (3)
C80.0349 (17)0.053 (2)0.0318 (18)−0.0077 (15)−0.0022 (14)0.0041 (15)
C90.0363 (17)0.055 (2)0.0337 (18)0.0026 (16)−0.0032 (14)0.0031 (16)
C100.0427 (19)0.065 (3)0.041 (2)−0.0023 (18)−0.0064 (16)0.0121 (18)
C110.0354 (17)0.063 (2)0.0315 (19)−0.0086 (16)−0.0014 (14)0.0019 (17)
C120.0399 (19)0.063 (2)0.0313 (19)−0.0064 (17)−0.0003 (14)0.0004 (18)
C130.059 (2)0.063 (3)0.034 (2)−0.003 (2)0.0059 (17)−0.0042 (18)
C140.068 (3)0.068 (3)0.051 (3)−0.007 (2)0.012 (2)−0.011 (2)
C150.071 (3)0.106 (4)0.040 (3)−0.005 (3)−0.009 (2)0.023 (3)
C160.060 (3)0.108 (4)0.030 (2)−0.024 (3)−0.0005 (17)0.003 (2)
C170.050 (2)0.061 (3)0.042 (2)−0.0113 (18)0.0022 (16)−0.0028 (17)
S1—O11.418 (3)C4—H40.9300
S1—O21.430 (3)C5—C61.375 (6)
S1—N11.643 (3)C6—C71.366 (6)
S1—C51.746 (4)C6—H60.9300
S2—C101.722 (4)C7—H70.9300
S2—C91.734 (4)C8—C91.359 (5)
O3—C121.335 (5)C8—C111.434 (5)
O3—C131.464 (4)C9—C121.467 (5)
O4—C121.197 (5)C10—C111.384 (6)
N1—C81.423 (5)C11—C171.417 (5)
N1—H1N0.95 (3)C13—C141.496 (6)
N2—C151.340 (6)C13—H13A0.9700
N2—C101.342 (5)C13—H13B0.9700
C1—C21.532 (7)C14—H14A0.9600
C1—H1A0.9600C14—H14B0.9600
C1—H1B0.9600C14—H14C0.9600
C1—H1C0.9600C15—C161.355 (7)
C2—C71.390 (8)C15—H150.9300
C2—C31.395 (8)C16—C171.383 (6)
C3—C41.385 (6)C16—H160.9300
C3—H30.9300C17—H170.9300
C4—C51.390 (5)
O1—S1—O2119.11 (18)C9—C8—N1123.8 (3)
O1—S1—N1107.37 (16)C9—C8—C11112.4 (3)
O2—S1—N1105.00 (16)N1—C8—C11123.3 (3)
O1—S1—C5109.43 (18)C8—C9—C12126.6 (3)
O2—S1—C5107.97 (18)C8—C9—S2112.9 (3)
N1—S1—C5107.34 (16)C12—C9—S2120.3 (3)
C10—S2—C990.63 (18)N2—C10—C11125.8 (4)
C12—O3—C13116.1 (3)N2—C10—S2121.5 (4)
C8—N1—S1122.0 (2)C11—C10—S2112.7 (3)
C8—N1—H1N114 (3)C10—C11—C17118.2 (3)
S1—N1—H1N109 (3)C10—C11—C8111.4 (3)
C15—N2—C10114.2 (4)C17—C11—C8130.2 (4)
C2—C1—H1A109.5O4—C12—O3124.0 (3)
C2—C1—H1B109.5O4—C12—C9124.4 (4)
H1A—C1—H1B109.5O3—C12—C9111.7 (3)
C2—C1—H1C109.5O3—C13—C14107.3 (3)
H1A—C1—H1C109.5O3—C13—H13A110.3
H1B—C1—H1C109.5C14—C13—H13A110.3
C7—C2—C3119.4 (5)O3—C13—H13B110.3
C7—C2—C1121.5 (7)C14—C13—H13B110.3
C3—C2—C1118.9 (6)H13A—C13—H13B108.5
C4—C3—C2119.7 (5)C13—C14—H14A109.5
C4—C3—H3120.1C13—C14—H14B109.5
C2—C3—H3120.1H14A—C14—H14B109.5
C3—C4—C5119.5 (5)C13—C14—H14C109.5
C3—C4—H4120.3H14A—C14—H14C109.5
C5—C4—H4120.3H14B—C14—H14C109.5
C6—C5—C4120.8 (4)N2—C15—C16124.8 (4)
C6—C5—S1119.7 (3)N2—C15—H15117.6
C4—C5—S1119.5 (3)C16—C15—H15117.6
C7—C6—C5119.7 (5)C15—C16—C17121.6 (4)
C7—C6—H6120.1C15—C16—H16119.2
C5—C6—H6120.1C17—C16—H16119.2
C6—C7—C2120.9 (5)C16—C17—C11115.4 (4)
C6—C7—H7119.6C16—C17—H17122.3
C2—C7—H7119.6C11—C17—H17122.3
O1—S1—N1—C8−38.8 (3)C10—S2—C9—C12−174.1 (3)
O2—S1—N1—C8−166.5 (3)C15—N2—C10—C113.0 (6)
C5—S1—N1—C878.8 (3)C15—N2—C10—S2−175.2 (3)
C7—C2—C3—C40.5 (7)C9—S2—C10—N2178.1 (4)
C1—C2—C3—C4−174.8 (4)C9—S2—C10—C11−0.3 (3)
C2—C3—C4—C50.9 (7)N2—C10—C11—C17−2.6 (6)
C3—C4—C5—C6−1.5 (6)S2—C10—C11—C17175.8 (3)
C3—C4—C5—S1176.2 (3)N2—C10—C11—C8−178.3 (4)
O1—S1—C5—C6−166.5 (3)S2—C10—C11—C80.0 (4)
O2—S1—C5—C6−35.5 (4)C9—C8—C11—C100.4 (4)
N1—S1—C5—C677.3 (4)N1—C8—C11—C10172.4 (3)
O1—S1—C5—C415.8 (4)C9—C8—C11—C17−174.7 (3)
O2—S1—C5—C4146.9 (3)N1—C8—C11—C17−2.7 (6)
N1—S1—C5—C4−100.4 (3)C13—O3—C12—O4−0.1 (5)
C4—C5—C6—C70.7 (7)C13—O3—C12—C9178.8 (3)
S1—C5—C6—C7−176.9 (3)C8—C9—C12—O42.4 (6)
C5—C6—C7—C20.6 (7)S2—C9—C12—O4176.2 (3)
C3—C2—C7—C6−1.2 (7)C8—C9—C12—O3−176.5 (3)
C1—C2—C7—C6173.9 (4)S2—C9—C12—O3−2.7 (4)
S1—N1—C8—C9−115.8 (4)C12—O3—C13—C14−178.0 (3)
S1—N1—C8—C1173.0 (4)C10—N2—C15—C16−2.2 (7)
N1—C8—C9—C121.5 (6)N2—C15—C16—C171.0 (7)
C11—C8—C9—C12173.5 (3)C15—C16—C17—C11−0.4 (6)
N1—C8—C9—S2−172.6 (3)C10—C11—C17—C161.1 (5)
C11—C8—C9—S2−0.6 (4)C8—C11—C17—C16175.9 (4)
C10—S2—C9—C80.5 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O40.95 (3)2.22 (3)2.867 (4)125 (3)
N1—H1N···O2i0.95 (3)2.21 (3)3.033 (4)145 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O40.95 (3)2.22 (3)2.867 (4)125 (3)
N1—H1N⋯O2i0.95 (3)2.21 (3)3.033 (4)145 (3)

Symmetry code: (i) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  Crystal structure and Hirshfeld surface analysis of 5-acetyl-3-amino-6-methyl-N-phenyl-4-[(E)-2-phenyl-ethen-yl]thieno[2,3-b]pyridine-2-carbox-amide.

Authors:  Shaaban K Mohamed; Etify A Bakhite; Sevim Türktekin Çelikesir; Hajjaj H M Abdu-Allah; Mehmet Akkurt; Omaima F Ibrahim; Joel T Mague; Safiyyah A H Al-Waleedy
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2022-01-28
  1 in total

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