Literature DB >> 21581869

4-Chloro-N-(3,4,5-trimethoxy-benzyl-idene)aniline.

Aliakbar Dehno Khalaji, Jilla Asghari, Karla Fejfarová, Michal Dušek.   

Abstract

The title compound, C(16)H(16)ClNO(3), is a Schiff base displaying a trans configuration of the C=N double bond. In the crystal structure, inter-molecular C-H⋯N and bifurcated C-H⋯(O,O) hydrogen bonds are observed.

Entities:  

Year:  2009        PMID: 21581869      PMCID: PMC2968176          DOI: 10.1107/S1600536809000300

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For backgroud and related structures, see: Khalaji et al. (2008 ▶); Khalaji & Harrison (2008 ▶); Khalaji et al. (2007 ▶); Zhang (2008 ▶); Akkurt et al. (2008 ▶); Kashmiri et al. (2008 ▶); Ren & Jian (2008 ▶). For the synthesis of the title compound, see: Khalaji & Ng (2008 ▶).

Experimental

Crystal data

C16H16ClNO3 M = 305.75 Monoclinic, a = 7.2012 (2) Å b = 8.18700 (10) Å c = 12.9734 (3) Å β = 105.050 (2)° V = 738.63 (3) Å3 Z = 2 Cu Kα radiation μ = 2.37 mm−1 T = 120 K 0.22 × 0.20 × 0.11 mm

Data collection

Oxford Diffraction Gemini diffractometer Absorption correction: numerical [Clark & Reid (1995 ▶) in CrysAlis RED (Oxford Diffraction, 2008 ▶)] T min = 0.680, T max = 0.809 5670 measured reflections 2225 independent reflections 2039 reflections with I > 3σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.109 S = 1.93 2225 reflections 189 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.21 e Å−3 Absolute structure: Flack (1983 ▶), 915 Friedel pairs Flack parameter: 0.06 (2) Data collection: CrysAlis CCD (Oxford Diffraction, 2005 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2008 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SIR2002 (Burla et al., 2003 ▶); program(s) used to refine structure: JANA2006 (Petříček et al., 2007 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: JANA2006. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809000300/bt2844sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809000300/bt2844Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H16ClNO3F(000) = 320
Mr = 305.75Dx = 1.379 Mg m3
Monoclinic, P21Cu Kα radiation, λ = 1.54184 Å
Hall symbol: P 2ybCell parameters from 4239 reflections
a = 7.2012 (2) Åθ = 3.5–62.6°
b = 8.1870 (1) ŵ = 2.37 mm1
c = 12.9734 (3) ÅT = 120 K
β = 105.050 (2)°Prism, colorless
V = 738.63 (3) Å30.22 × 0.20 × 0.11 mm
Z = 2
Oxford Diffraction Gemini diffractometer with Xcalibur goniometer, Atlas detector and Gemini ultra Cu source2225 independent reflections
Radiation source: X-ray tube2039 reflections with I > 3σ(I)
mirrorRint = 0.048
Detector resolution: 20.7567 pixels mm-1θmax = 62.7°, θmin = 3.5°
rotation method data acquisition using ω scansh = −8→7
Absorption correction: numerical [based on the crystal shape, using the method implemented in CrysAlis RED (Oxford Diffraction, 2008) according to Clark & Reid (1995)]k = −9→9
Tmin = 0.680, Tmax = 0.809l = −14→14
5670 measured reflections
Refinement on F2H-atom parameters constrained
R[F2 > 2σ(F2)] = 0.045Weighting scheme based on measured s.u.'s w = 1/[σ2(I) + 0.0016I2]
wR(F2) = 0.109(Δ/σ)max = 0.013
S = 1.93Δρmax = 0.28 e Å3
2225 reflectionsΔρmin = −0.21 e Å3
189 parametersAbsolute structure: Flack (1983), 915 Friedel pairs
0 restraintsFlack parameter: 0.06 (2)
65 constraints
Refinement. The refinement was carried out against all reflections. The conventional R-factor is always based on F. The goodness of fit as well as the weighted R-factor are based on F and F2 for refinement carried out on F and F2, respectively. The threshold expression is used only for calculating R-factors etc. and it is not relevant to the choice of reflections for refinement.The program used for refinement, Jana2006, uses the weighting scheme based on the experimental expectations, see _refine_ls_weighting_details, that does not force S to be one. Therefore the values of S are usually larger than the ones from the SHELX program.
xyzUiso*/Ueq
Cl10.00790 (13)0.16442 (1)0.00937 (6)0.0366 (3)
O11.2823 (3)0.6425 (3)0.64185 (15)0.0252 (7)
O21.4726 (3)0.8288 (3)0.53638 (16)0.0255 (7)
O31.3717 (3)0.8527 (3)0.32476 (16)0.0298 (8)
N10.7360 (4)0.5116 (4)0.2085 (2)0.0261 (10)
C11.2081 (4)0.6506 (4)0.5342 (2)0.0199 (9)
C21.3141 (5)0.7435 (4)0.4792 (2)0.0220 (10)
C31.2528 (5)0.7593 (4)0.3685 (3)0.0226 (11)
C41.0855 (4)0.6828 (4)0.3111 (2)0.0239 (10)
C50.9789 (5)0.5918 (4)0.3668 (2)0.0212 (10)
C61.0392 (5)0.5747 (4)0.4767 (2)0.0226 (11)
C70.7985 (5)0.5127 (4)0.3104 (2)0.0226 (10)
C80.5578 (5)0.4334 (4)0.1638 (2)0.0240 (10)
C90.4039 (4)0.4350 (4)0.2092 (2)0.0250 (11)
C100.2330 (5)0.3568 (4)0.1612 (2)0.0263 (11)
C110.2161 (5)0.2724 (4)0.0662 (2)0.0273 (11)
C120.3676 (5)0.2727 (4)0.0172 (3)0.0324 (12)
C130.5356 (5)0.3535 (5)0.0654 (2)0.0315 (12)
C141.1767 (5)0.5531 (5)0.7017 (3)0.0370 (13)
C151.6479 (5)0.7425 (5)0.5441 (3)0.0319 (12)
C161.3098 (5)0.8853 (5)0.2132 (3)0.0366 (14)
H41.0439680.6922860.2348450.0286*
H60.9647880.5105970.513410.0271*
H90.4159760.4914630.2754740.03*
H100.1269660.3608180.1932330.0316*
H120.3546530.217079−0.0493980.0389*
H130.6389750.3552150.0312350.0378*
H14a1.2308130.5722640.7764970.0444*
H14b1.0449230.5881520.6820850.0444*
H14c1.1829750.438670.6869180.0444*
H15a1.7537390.8053080.5854710.0382*
H15b1.6432030.6389740.5780740.0382*
H15c1.6645540.7251270.4738440.0382*
H16a1.4016520.9548630.1929560.0439*
H16b1.2992410.7843870.1743830.0439*
H16c1.1868280.9384640.1971260.0439*
H70.7236790.4590980.3518030.0271*
U11U22U33U12U13U23
Cl10.0321 (4)0.0363 (4)0.0337 (4)−0.0062 (4)−0.0049 (3)−0.0031 (4)
O10.0277 (12)0.0274 (12)0.0184 (10)−0.0043 (10)0.0021 (8)−0.0007 (9)
O20.0210 (12)0.0256 (12)0.0276 (11)−0.0031 (9)0.0023 (9)−0.0061 (9)
O30.0298 (13)0.0353 (12)0.0235 (11)−0.0092 (11)0.0054 (10)0.0014 (10)
N10.0248 (16)0.0292 (15)0.0227 (15)−0.0020 (12)0.0032 (12)−0.0012 (11)
C10.0216 (16)0.0189 (14)0.0184 (14)0.0012 (14)0.0039 (11)−0.0004 (13)
C20.0190 (16)0.0203 (15)0.0239 (17)−0.0012 (13)0.0007 (13)−0.0033 (12)
C30.0235 (18)0.0192 (17)0.0280 (17)−0.0008 (13)0.0115 (14)0.0002 (12)
C40.0229 (17)0.0235 (17)0.0235 (15)0.0008 (14)0.0030 (12)0.0005 (13)
C50.0182 (18)0.0199 (15)0.0251 (17)0.0011 (12)0.0046 (14)−0.0007 (12)
C60.0239 (19)0.0209 (17)0.0227 (17)0.0018 (13)0.0057 (13)0.0015 (12)
C70.0211 (17)0.0200 (16)0.0251 (17)−0.0003 (13)0.0033 (13)−0.0005 (13)
C80.0263 (17)0.0220 (16)0.0206 (16)−0.0015 (15)0.0007 (13)−0.0004 (13)
C90.0252 (18)0.0281 (18)0.0201 (16)0.0027 (15)0.0032 (13)0.0004 (13)
C100.0254 (19)0.0296 (18)0.0219 (17)0.0010 (14)0.0024 (13)0.0003 (14)
C110.034 (2)0.0230 (16)0.0191 (16)0.0008 (14)−0.0037 (14)0.0007 (12)
C120.032 (2)0.0353 (19)0.0270 (18)0.0025 (16)0.0020 (15)−0.0050 (14)
C130.032 (2)0.040 (2)0.0226 (17)−0.0018 (16)0.0080 (14)−0.0030 (15)
C140.035 (2)0.048 (2)0.0262 (19)−0.0060 (18)0.0048 (15)0.0083 (16)
C150.0185 (18)0.0334 (18)0.040 (2)0.0021 (15)0.0018 (15)0.0018 (15)
C160.042 (2)0.043 (2)0.0260 (18)−0.0086 (17)0.0097 (16)0.0074 (15)
Cl1—C102.708 (3)C7—H70.96
Cl1—C111.732 (3)C8—C91.384 (5)
Cl1—C122.714 (4)C8—C131.406 (5)
O1—C11.362 (3)C9—C101.383 (4)
O1—C141.423 (5)C9—H90.96
O2—C21.379 (4)C10—C111.390 (5)
O2—C151.427 (4)C10—H100.96
O3—C31.375 (4)C11—C121.398 (6)
O3—C161.424 (4)C12—C131.378 (5)
N1—C71.282 (4)C12—H120.96
N1—C81.417 (4)C13—H130.96
C1—C21.397 (5)C14—H14a0.96
C1—C61.397 (4)C14—H14b0.96
C2—C31.395 (4)C14—H14c0.96
C3—C41.390 (4)C15—H15a0.96
C4—C51.398 (5)C15—H15b0.96
C4—H40.96C15—H15c0.96
C5—C61.385 (4)C16—H16a0.96
C5—C71.466 (4)C16—H16b0.96
C6—H60.96C16—H16c0.96
C10—Cl1—C1252.95 (11)C8—C9—H9119.2976
C1—O1—C14117.5 (2)C10—C9—H9119.2983
C2—O2—C15112.4 (3)C9—C10—C11119.5 (3)
C3—O3—C16117.3 (2)C9—C10—H10120.2657
C7—N1—C8117.6 (3)C11—C10—H10120.265
O1—C1—C2115.4 (3)C10—C11—C12120.2 (3)
O1—C1—C6125.5 (3)C11—C12—C13119.5 (3)
C2—C1—C6119.0 (3)C11—C12—H12120.2721
O2—C2—C1119.1 (3)C13—C12—H12120.2719
O2—C2—C3120.3 (3)C8—C13—C12120.9 (4)
C1—C2—C3120.5 (3)C8—C13—H13119.5347
O3—C3—C2114.3 (3)C12—C13—H13119.5353
O3—C3—C4125.1 (3)O1—C14—H14a109.4713
C2—C3—C4120.5 (3)O1—C14—H14b109.4711
C3—C4—C5118.6 (3)O1—C14—H14c109.4713
C3—C4—H4120.6757H14a—C14—H14b109.4712
C5—C4—H4120.6756H14a—C14—H14c109.4714
C4—C5—C6121.2 (3)H14b—C14—H14c109.471
C4—C5—C7120.8 (3)O2—C15—H15a109.4714
C6—C5—C7118.0 (3)O2—C15—H15b109.4711
C1—C6—C5120.1 (3)O2—C15—H15c109.4715
C1—C6—H6119.9695H15a—C15—H15b109.4705
C5—C6—H6119.9698H15a—C15—H15c109.4714
N1—C7—C5123.1 (3)H15b—C15—H15c109.4714
N1—C7—H7118.4336O3—C16—H16a109.4709
C5—C7—H7118.4335O3—C16—H16b109.4714
N1—C8—C9124.2 (3)O3—C16—H16c109.4711
N1—C8—C13117.3 (3)H16a—C16—H16b109.4712
C9—C8—C13118.4 (3)H16a—C16—H16c109.4712
C8—C9—C10121.4 (3)H16b—C16—H16c109.4715
D—H···AD—HH···AD···AD—H···A
C7—H7···O1i0.962.593.177 (4)119
C7—H7···O2i0.962.513.471 (4)178
C12—H12···N1ii0.962.613.545 (5)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C7—H7⋯O1i0.962.593.177 (4)119
C7—H7⋯O2i0.962.513.471 (4)178
C12—H12⋯N1ii0.962.613.545 (5)164

Symmetry codes: (i) ; (ii) .

  5 in total

1.  4-[(E)-Phenyl-imino-meth-yl]benzonitrile.

Authors:  Mmuhammad Akram Kashmiri; M Nawaz Tahir; Muhammad Akhtar; Mushtaq Ahmed; Asif Hanif Ch
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-02

2.  N,N'-Bis[(E)-2-Benzyl-idenepropylidene]ethane-1,2-diamine.

Authors:  Aliakbar Dehno Khalaji; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-16

3.  (E)-N-(2,3,4-Trimeth-oxy-6-methyl-benzyl-idene)aniline.

Authors:  Hui Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-07

4.  3,4-Dimeth-oxy-N-(3-nitro-benzyl-idene)aniline.

Authors:  Mehmet Akkurt; Ali Asghar Jarrahpour; Malihe Aye; Mustafa Gençaslan; Orhan Büyükgüngör
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-22

5.  4-Meth-oxy-N-(2-nitro-benzyl-idene)aniline.

Authors:  Xiao-Yan Ren; Fang-Fang Jian
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-27
  5 in total
  2 in total

1.  4-Chloro-N-[(E)-(3,4-dimeth-oxy-phen-yl)methyl-idene]aniline.

Authors:  M Nawaz Tahir; Muhammad Ilyas Tariq; Muhammad Sarfraz; Shahbaz Ahmad; Riaz H Tariq
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-18

2.  4-Bromo-N-(3,4,5-trimethoxy-benzyl-idene)aniline.

Authors:  Aliakbar Dehno Khalaji; Matthias Weil; Kazuma Gotoh; Hiroyuki Ishida
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-31
  2 in total

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