Literature DB >> 21581843

4-Methyl-2-n-propyl-1H-benzimidazole-6-carboxylic acid.

Bing Xu, Ling Yong, Dan Wang, Ren Zhang, Xiang Li.   

Abstract

In the title compound, C(12)H(14)N(2)O(2), the benzene ring and imidazole ring are almost coplanar, making a dihedral angle of 2.47 (14)°. Inter-molecular O-H⋯N, N-H⋯O and C-H⋯O hydrogen bonds stabilize the crystal structure.

Entities:  

Year:  2009        PMID: 21581843      PMCID: PMC2968158          DOI: 10.1107/S1600536808043420

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of the title compound as an inter­mediate in the preparation of telmisartan, see: Ries et al. (1993 ▶). For the biological activity of telmisartan, see: Engeli et al. (2000 ▶); Goossens et al. (2003 ▶). For reference structural data, see: Allen et al. (1987 ▶). For related literature, see: Kintscher et al. (2004 ▶).

Experimental

Crystal data

C12H14N2O2 M = 218.25 Tetragonal, a = 12.0548 (17) Å c = 31.899 (6) Å V = 4635.5 (13) Å3 Z = 16 Mo Kα radiation μ = 0.09 mm−1 T = 293 (2) K 0.30 × 0.30 × 0.10 mm

Data collection

Enraf–Nonuis CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.975, T max = 0.991 4426 measured reflections 2105 independent reflections 1304 reflections with I > 2σ(I) R int = 0.042 3 standard reflections every 200 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.072 wR(F 2) = 0.195 S = 1.00 2105 reflections 133 parameters 2 restraints H-atom parameters constrained Δρmax = 0.62 e Å−3 Δρmin = −0.39 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius,1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo,1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808043420/sj2567sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808043420/sj2567Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H14N2O2Dx = 1.251 Mg m3
Mr = 218.25Mo Kα radiation, λ = 0.71073 Å
Tetragonal, I41/aCell parameters from 25 reflections
Hall symbol: -I 4adθ = 10–13°
a = 12.0548 (17) ŵ = 0.09 mm1
c = 31.899 (6) ÅT = 293 K
V = 4635.5 (13) Å3Block, colorless
Z = 160.30 × 0.30 × 0.10 mm
F(000) = 1856
Enraf–Nonuis CAD-4 diffractometer1304 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.042
graphiteθmax = 25.2°, θmin = 1.8°
ω/2θ scansh = −9→10
Absorption correction: ψ scan (North et al., 1968)k = 0→14
Tmin = 0.975, Tmax = 0.991l = 0→38
4426 measured reflections3 standard reflections every 200 reflections
2105 independent reflections intensity decay: none
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.072H-atom parameters constrained
wR(F2) = 0.195w = 1/[σ2(Fo2) + (0.1P)2 + 5P] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
2105 reflectionsΔρmax = 0.62 e Å3
133 parametersΔρmin = −0.39 e Å3
2 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008)
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.039 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.7815 (2)0.4947 (2)0.07388 (7)0.0591 (8)
O20.7256 (2)0.32125 (18)0.07006 (6)0.0471 (7)
H2C0.70770.33410.09440.071*
N10.8807 (2)0.3584 (2)−0.11544 (7)0.0376 (7)
N20.8170 (2)0.2123 (2)−0.08282 (7)0.0420 (7)
H2D0.79400.1458−0.07850.050*
C10.6545 (5)0.2486 (5)−0.18175 (17)0.104
H1B0.58910.2171−0.19410.155*
H1C0.68430.3042−0.20010.155*
H1D0.63580.2818−0.15530.155*
C20.7407 (4)0.1577 (5)−0.17491 (18)0.100
H2A0.70970.1043−0.15540.120*
H2B0.75130.1195−0.20140.120*
C30.8501 (3)0.1904 (3)−0.15925 (10)0.0561 (10)
H3A0.88600.2355−0.18050.067*
H3B0.89450.1239−0.15570.067*
C40.8509 (3)0.2525 (3)−0.11926 (9)0.0402 (8)
C50.8656 (2)0.3874 (3)−0.07355 (9)0.0324 (7)
C60.8820 (2)0.4885 (2)−0.05283 (9)0.0341 (7)
C70.8539 (2)0.4896 (3)−0.01107 (9)0.0351 (7)
H7A0.86530.55430.00420.042*
C80.8085 (2)0.3966 (2)0.00960 (9)0.0315 (7)
C90.7938 (3)0.2969 (2)−0.01128 (9)0.0353 (8)
H9A0.76450.23500.00210.042*
C100.8246 (3)0.2941 (2)−0.05289 (9)0.0325 (7)
C110.9269 (3)0.5876 (3)−0.07572 (11)0.0523 (10)
H11A0.94100.5681−0.10440.078*
H11B0.99470.6112−0.06270.078*
H11C0.87370.6467−0.07470.078*
C120.7704 (3)0.4069 (2)0.05433 (9)0.0352 (7)
U11U22U33U12U13U23
O10.097 (2)0.0411 (14)0.0391 (14)−0.0157 (14)0.0171 (13)−0.0130 (11)
O20.0713 (17)0.0394 (13)0.0306 (12)−0.0073 (12)0.0238 (11)−0.0056 (10)
N10.0401 (16)0.0475 (17)0.0250 (13)0.0030 (13)0.0022 (11)0.0055 (12)
N20.0599 (19)0.0366 (15)0.0295 (13)−0.0022 (13)0.0098 (13)0.0006 (12)
C10.1040.1040.1040.0000.0000.000
C20.1000.1000.1000.0000.0000.000
C30.062 (2)0.079 (3)0.0275 (18)0.006 (2)0.0032 (16)−0.0106 (17)
C40.0392 (19)0.056 (2)0.0250 (16)0.0079 (16)0.0066 (14)0.0000 (15)
C50.0309 (16)0.0392 (18)0.0271 (15)0.0063 (13)0.0052 (13)0.0077 (13)
C60.0356 (17)0.0303 (17)0.0365 (17)−0.0015 (13)0.0005 (14)0.0093 (13)
C70.0379 (18)0.0330 (17)0.0345 (16)−0.0008 (13)0.0032 (13)−0.0027 (13)
C80.0410 (18)0.0273 (16)0.0261 (15)0.0038 (13)0.0033 (13)0.0040 (12)
C90.0472 (19)0.0318 (17)0.0269 (16)−0.0020 (14)0.0091 (13)0.0032 (13)
C100.0454 (19)0.0293 (16)0.0229 (14)0.0015 (13)0.0046 (13)0.0015 (12)
C110.064 (2)0.041 (2)0.052 (2)−0.0089 (17)0.0104 (18)0.0146 (17)
C120.0430 (19)0.0321 (17)0.0305 (16)0.0009 (14)0.0040 (14)−0.0042 (14)
O1—C121.237 (4)C3—H3A0.9700
O2—C121.268 (3)C3—H3B0.9700
O2—H2C0.8200C5—C101.394 (4)
N1—C41.332 (4)C5—C61.400 (4)
N1—C51.393 (4)C6—C71.374 (4)
N2—C41.324 (4)C6—C111.501 (4)
N2—C101.376 (4)C7—C81.411 (4)
N2—H2D0.8600C7—H7A0.9300
C1—C21.526 (6)C8—C91.385 (4)
C1—H1B0.9600C8—C121.504 (4)
C1—H1C0.9600C9—C101.379 (4)
C1—H1D0.9600C9—H9A0.9300
C2—C31.465 (6)C11—H11A0.9600
C2—H2A0.9700C11—H11B0.9600
C2—H2B0.9700C11—H11C0.9600
C3—C41.479 (4)
C12—O2—H2C109.5N1—C5—C6130.7 (3)
C4—N1—C5107.0 (2)C10—C5—C6121.9 (3)
C4—N2—C10109.1 (3)C7—C6—C5115.5 (3)
C4—N2—H2D125.5C7—C6—C11123.5 (3)
C10—N2—H2D125.5C5—C6—C11120.9 (3)
C2—C1—H1B109.5C6—C7—C8122.7 (3)
C2—C1—H1C109.5C6—C7—H7A118.6
H1B—C1—H1C109.5C8—C7—H7A118.6
C2—C1—H1D109.5C9—C8—C7120.9 (3)
H1B—C1—H1D109.5C9—C8—C12119.2 (3)
H1C—C1—H1D109.5C7—C8—C12119.8 (3)
C3—C2—C1118.0 (5)C10—C9—C8116.7 (3)
C3—C2—H2A107.8C10—C9—H9A121.6
C1—C2—H2A107.8C8—C9—H9A121.6
C3—C2—H2B107.8N2—C10—C9131.9 (3)
C1—C2—H2B107.8N2—C10—C5105.9 (2)
H2A—C2—H2B107.2C9—C10—C5122.1 (3)
C2—C3—C4115.8 (4)C6—C11—H11A109.5
C2—C3—H3A108.3C6—C11—H11B109.5
C4—C3—H3A108.3H11A—C11—H11B109.5
C2—C3—H3B108.3C6—C11—H11C109.5
C4—C3—H3B108.3H11A—C11—H11C109.5
H3A—C3—H3B107.4H11B—C11—H11C109.5
N2—C4—N1110.7 (3)O1—C12—O2122.9 (3)
N2—C4—C3124.8 (3)O1—C12—C8121.1 (3)
N1—C4—C3124.5 (3)O2—C12—C8116.0 (3)
N1—C5—C10107.3 (3)
C1—C2—C3—C456.3 (6)C6—C7—C8—C12−174.6 (3)
C10—N2—C4—N1−0.2 (4)C7—C8—C9—C10−0.6 (5)
C10—N2—C4—C3−177.3 (3)C12—C8—C9—C10176.5 (3)
C5—N1—C4—N20.5 (4)C4—N2—C10—C9175.5 (3)
C5—N1—C4—C3177.5 (3)C4—N2—C10—C5−0.1 (4)
C2—C3—C4—N263.9 (5)C8—C9—C10—N2−176.8 (3)
C2—C3—C4—N1−112.7 (4)C8—C9—C10—C5−1.8 (5)
C4—N1—C5—C10−0.5 (3)N1—C5—C10—N20.4 (3)
C4—N1—C5—C6−178.6 (3)C6—C5—C10—N2178.6 (3)
N1—C5—C6—C7177.2 (3)N1—C5—C10—C9−175.7 (3)
C10—C5—C6—C7−0.6 (4)C6—C5—C10—C92.5 (5)
N1—C5—C6—C11−2.5 (5)C9—C8—C12—O1−179.5 (3)
C10—C5—C6—C11179.7 (3)C7—C8—C12—O1−2.4 (5)
C5—C6—C7—C8−1.8 (4)C9—C8—C12—O2−0.4 (4)
C11—C6—C7—C8177.9 (3)C7—C8—C12—O2176.7 (3)
C6—C7—C8—C92.4 (5)
D—H···AD—HH···AD···AD—H···A
C3—H3B···O2i0.972.563.399 (4)144
C11—H11A···O2ii0.962.663.587 (4)163
O2—H2C···N1iii0.821.802.562 (3)153
N2—H2D···O1iv0.861.832.673 (3)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3B⋯O2i0.972.563.399 (4)144
C11—H11A⋯O2ii0.962.663.587 (4)163
O2—H2C⋯N1iii0.821.802.562 (3)153
N2—H2D⋯O1iv0.861.832.673 (3)165

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  5 in total

Review 1.  Possible involvement of the adipose tissue renin-angiotensin system in the pathophysiology of obesity and obesity-related disorders.

Authors:  G H Goossens; E E Blaak; M A van Baak
Journal:  Obes Rev       Date:  2003-02       Impact factor: 9.213

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 3.  Physiology and pathophysiology of the adipose tissue renin-angiotensin system.

Authors:  S Engeli; R Negrel; A M Sharma
Journal:  Hypertension       Date:  2000-06       Impact factor: 10.190

Review 4.  Angiotensin II, PPAR-gamma and atherosclerosis.

Authors:  Ulrich Kintscher; Christopher J Lyon; Ronald E Law
Journal:  Front Biosci       Date:  2004-01-01

5.  6-Substituted benzimidazoles as new nonpeptide angiotensin II receptor antagonists: synthesis, biological activity, and structure-activity relationships.

Authors:  U J Ries; G Mihm; B Narr; K M Hasselbach; H Wittneben; M Entzeroth; J C van Meel; W Wienen; N H Hauel
Journal:  J Med Chem       Date:  1993-12-10       Impact factor: 7.446

  5 in total

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